Factsheet for Bra007204.1-P

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 2
plastid 2
cytosol 3
mitochondrion 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY27251	Canola	nucleus	98.39	98.39
CDX72185	Canola	nucleus	79.39	97.82
Bra014716.1-P	Field mustard	cytosol	52.17	88.52
AT3G55970.1	Thale cress	cytosol	50.24	85.95
KRH14938	Soybean	cytosol	37.68	64.82
VIT_13s0067g01020.t01	Wine grape	cytosol	37.2	64.35
KRG97722	Soybean	cytosol	37.04	63.71
KRH31155	Soybean	cytosol	36.88	63.43
Bra034168.1-P	Field mustard	cytosol	29.47	63.32
Solyc03g096050.2.1	Tomato	cytosol	35.27	61.34
Bra028752.1-P	Field mustard	cytosol	36.55	61.02
Bra005860.1-P	Field mustard	cytosol	36.55	61.02
PGSC0003DMT400031149	Potato	cytosol	34.94	60.96
KRH73197	Soybean	cytosol	37.04	60.85
GSMUA_Achr6P15610_001	Banana	cytosol	31.88	56.25
GSMUA_Achr7P15540_001	Banana	cytosol	30.76	53.95
Bra000045.1-P	Field mustard	plastid	30.6	53.82
TraesCS1B01G088600.1	Wheat	cytoskeleton, cytosol, peroxisome	30.92	53.63
Bra017132.1-P	Field mustard	plastid	30.27	53.11
TraesCS1D01G072700.1	Wheat	cytoskeleton, cytosol, peroxisome	30.6	53.07
TraesCS1A01G070200.1	Wheat	cytoskeleton, cytosol, peroxisome	30.27	52.51
EES18946	Sorghum	cytosol	30.6	51.91
Os01t0832600-01	Rice	cytosol	30.27	51.37
Bra034861.1-P	Field mustard	cytosol	33.49	51.36
HORVU1Hr1G015050.7	Barley	cytosol, peroxisome	29.95	51.24
Zm00001d028744_P001	Maize	cytosol	30.92	51.06
TraesCS4A01G109200.1	Wheat	cytosol	30.11	50.82
TraesCS3B01G383900.1	Wheat	cytosol	30.43	50.67
TraesCS4B01G195000.1	Wheat	cytosol	29.95	50.54
TraesCS3D01G345600.1	Wheat	cytosol	30.76	50.53
TraesCS3A01G351400.2	Wheat	cytosol	30.76	50.4
HORVU4Hr1G056500.2	Barley	cytosol, peroxisome, plastid	29.79	49.87
Zm00001d042980_P002	Maize	cytosol	29.79	49.47
TraesCS4D01G195700.1	Wheat	cytosol	29.31	49.46
Os05t0127500-01	Rice	cytosol	29.31	49.46
TraesCS4B01G328300.1	Wheat	cytosol	21.26	49.25
EES01705	Sorghum	cytosol	30.76	49.23
Zm00001d035462_P001	Maize	cytosol	30.11	48.95
EER92419	Sorghum	cytosol	30.11	48.83
Os03t0289800-01	Rice	cytosol	30.27	48.58
Zm00001d047744_P001	Maize	mitochondrion	30.76	46.93
HORVU3Hr1G087570.4	Barley	cytosol, peroxisome, plastid	30.43	46.21
Zm00001d012456_P004	Maize	plastid	30.92	40.68
Bra038447.1-P	Field mustard	cytosol, nucleus, peroxisome	21.26	38.6
Bra009358.1-P	Field mustard	cytoskeleton, cytosol, peroxisome	19.97	36.9
Bra018076.1-P	Field mustard	cytosol	17.71	36.07
Bra038647.1-P	Field mustard	cytosol	17.71	35.83
Bra000713.1-P	Field mustard	plastid	20.13	35.71
Bra037921.1-P	Field mustard	cytosol	19.48	34.47
Bra029414.1-P	Field mustard	plastid	18.84	34.31
Bra000712.1-P	Field mustard	cytosol, nucleus, peroxisome	19.32	34.19
Bra038648.1-P	Field mustard	cytosol	16.26	34.01
Bra029211.1-P	Field mustard	cytosol	16.91	33.87
Bra037747.1-P	Field mustard	cytosol	16.91	33.44
Bra013652.1-P	Field mustard	cytosol	18.52	32.12
Bra014500.1-P	Field mustard	cytosol	18.36	31.93
Bra036828.1-P	Field mustard	cytosol	18.2	31.56
Bra019350.1-P	Field mustard	cytosol	18.04	31.37
Bra004867.1-P	Field mustard	cytosol	18.04	31.2
Bra012862.1-P	Field mustard	cytosol	17.55	31.14
Bra009771.1-P	Field mustard	mitochondrion	20.45	30.38
Bra017227.1-P	Field mustard	cytosol	17.55	29.7
Bra009258.1-P	Field mustard	cytosol, nucleus, peroxisome	12.24	27.54
Bra028696.1-P	Field mustard	cytosol	15.78	27.15
Bra029212.1-P	Field mustard	cytosol	18.2	26.78
Bra014831.1-P	Field mustard	cytosol	13.53	26.09

Protein Annotations

Gene3D:2.60.120.330	Gene3D:3.30.40.10	MapMan:50.1.13	InterPro:7-in-absentia-prot_TRAF-dom	EnsemblPlantsGene:Bra007204	EnsemblPlants:Bra007204.1
EnsemblPlants:Bra007204.1-P	InterPro:DIOX_N	GO:GO:0003674	GO:GO:0003824	GO:GO:0005488	GO:GO:0005515
GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005634	GO:GO:0006511	GO:GO:0007275
GO:GO:0008150	GO:GO:0008152	GO:GO:0008270	GO:GO:0009056	GO:GO:0009987	GO:GO:0016491
GO:GO:0019538	GO:GO:0046872	GO:GO:0055114	InterPro:IPNS-like	InterPro:IPR005123	InterPro:IPR008974
InterPro:IPR013010	InterPro:IPR013083	InterPro:IPR027443	UniProt:M4CSL2	InterPro:Oxoglu/Fe-dep_dioxygenase	PFAM:PF03145
PFAM:PF03171	PFAM:PF14226	PRINTS:PR00682	PFscan:PS51081	PFscan:PS51471	PANTHER:PTHR10209
PANTHER:PTHR10209:SF134	SUPFAM:SSF49599	SUPFAM:SSF51197	InterPro:TRAF-like	UniParc:UPI0002542B0E	InterPro:Znf_RING/FYVE/PHD
InterPro:Znf_SIAH	SEG:seg	:	:	:	:

Description

AT3G55970 (E=3e-182) | oxidoreductase, 2OG-Fe(II) oxygenase family protein

Coordinates

chrA09:-:27948405..27952705

Molecular Weight (calculated)

70795.6 Da

IEP (calculated)

5.818

GRAVY (calculated)

-0.391

Length

621 amino acids

Sequence
(BLAST)

001: MNMFQDWPEP IVRVQSLSQS NLKAIPNRYV KPLSQRPNLP SQNHHNKHNP VTAAIPIIDL GGLYTNDITL HAKTLDEISK ACKEWGFFQV VNHGMSPQLM
101: DRAKETWRDF FHLPMELKNM HANSPKTYEG YGSRLGVEKG AILDWSDYYY LHYCPLSLKD YTKWPSLSLH RREILEDYCK EMVKLCENLM SILSRNLGLQ
201: EDILQNAFGG KEEPGGCLRV NYYPKCPQPE LTLGLSPHSD PGGLTILLPD EQVAGLQVRG CDDAWITVEP APHALIVNIG DQIQMLTNSI YKSIEHRVIV
301: SPAKERLSLA FFYNPKGNIP IEPLKELVTE DSPALYSSTT YDQYRQFIRF SEDGNNSTSE KRQRTSGDTK GKKKRTATLH DLDAIECPLC FNPLTIPIFQ
401: CDNGHIACFT CLHKLKQKCA TCSLKTRSRN RAMERVLELL RVPCPNVELG CSGIISFAET STHLEICAFT KRACPFTSCD FVCFNKDLYE HSVAKHCESS
501: YMFECGKPVF IYPMSGKRVI LKEQTTEGEG EGEIVIVECF DTPQGRIFYA SCIGPGEEEL SYTFKLFSYC SDRLWFESDL ERVLEVSDEP PDEHFMLVPS
601: CMCPDYKFYI CINRQTEDDD E

Best Arabidopsis Sequence Match ( AT3G55970.1 )
(BLAST)

001: MNIFQDWPEP IVRVQSLSES NLGAIPNRYV KPLSQRPNIT PHNKHNPQTT TIPIIDLGRL YTDDLTLQAK TLDEISKACR ELGFFQVVNH GMSPQLMDQA
101: KATWREFFNL PMELKNMHAN SPKTYEGYGS RLGVEKGAIL DWSDYYYLHY QPSSLKDYTK WPSLPLHCRE ILEDYCKEMV KLCENLMKIL SKNLGLQEDR
201: LQNAFGGKEE SGGCLRVNYY PKCPQPELTL GISPHSDPGG LTILLPDEQV ASLQVRGSDD AWITVEPAPH AFIVNMGDQI QMLSNSIYKS VEHRVIVNPE
301: NERLSLAFFY NPKGNVPIEP LKELVTVDSP ALYSSTTYDR YRQFIRTQGP RSKCHIDELK SPR

Arabidopsis Description

JRG21JRG21 [Source:UniProtKB/TrEMBL;Acc:A0A178V764]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.