Factsheet for Bra005860.1-P

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 3
peroxisome 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, peroxisome
BaCelLo:	cytosol
MultiLoc:	peroxisome
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY11329	Canola	cytosol	100.0	100.0
AT5G05600.1	Thale cress	cytosol	89.25	89.49
Bra028752.1-P	Field mustard	cytosol	88.71	88.71
Bra034168.1-P	Field mustard	cytosol	61.02	78.55
KRG97722	Soybean	cytosol	68.82	70.91
KRH14938	Soybean	cytosol	68.28	70.36
KRH31155	Soybean	cytosol	67.47	69.53
VIT_13s0067g01020.t01	Wine grape	cytosol	66.4	68.8
Solyc03g096050.2.1	Tomato	cytosol	64.78	67.51
KRH73197	Soybean	cytosol	68.28	67.2
PGSC0003DMT400031149	Potato	cytosol	64.25	67.13
Bra034861.1-P	Field mustard	cytosol	69.62	63.95
Bra014716.1-P	Field mustard	cytosol	62.1	63.11
GSMUA_Achr7P15540_001	Banana	cytosol	57.8	60.73
GSMUA_Achr6P15610_001	Banana	cytosol	56.99	60.23
TraesCS1B01G088600.1	Wheat	cytoskeleton, cytosol, peroxisome	54.57	56.7
TraesCS1D01G072700.1	Wheat	cytoskeleton, cytosol, peroxisome	54.3	56.42
TraesCS1A01G070200.1	Wheat	cytoskeleton, cytosol, peroxisome	54.03	56.15
Bra000045.1-P	Field mustard	plastid	52.96	55.81
EES18946	Sorghum	cytosol	54.84	55.74
Bra017132.1-P	Field mustard	plastid	52.96	55.65
HORVU1Hr1G015050.7	Barley	cytosol, peroxisome	54.3	55.65
Os01t0832600-01	Rice	cytosol	54.57	55.46
TraesCS3D01G345600.1	Wheat	cytosol	55.38	54.5
TraesCS3B01G383900.1	Wheat	cytosol	54.57	54.42
TraesCS3A01G351400.2	Wheat	cytosol	55.38	54.35
Zm00001d042980_P002	Maize	cytosol	54.57	54.28
TraesCS4A01G109200.1	Wheat	cytosol	53.49	54.08
HORVU4Hr1G056500.2	Barley	cytosol, peroxisome, plastid	53.76	53.91
TraesCS4B01G195000.1	Wheat	cytosol	53.23	53.8
Os05t0127500-01	Rice	cytosol	53.23	53.8
Zm00001d028744_P001	Maize	cytosol	54.3	53.72
EES01705	Sorghum	cytosol	55.91	53.61
TraesCS4D01G195700.1	Wheat	cytosol	52.69	53.26
Zm00001d035462_P001	Maize	cytosol	53.76	52.36
EER92419	Sorghum	cytosol	53.49	51.96
Os03t0289800-01	Rice	cytosol	53.49	51.42
TraesCS4B01G328300.1	Wheat	cytosol	36.56	50.75
Zm00001d047744_P001	Maize	mitochondrion	54.3	49.63
HORVU3Hr1G087570.4	Barley	cytosol, peroxisome, plastid	53.76	48.9
Zm00001d012456_P004	Maize	plastid	55.11	43.43
Bra038447.1-P	Field mustard	cytosol, nucleus, peroxisome	35.22	38.3
Bra009358.1-P	Field mustard	cytoskeleton, cytosol, peroxisome	34.14	37.8
Bra018076.1-P	Field mustard	cytosol	30.38	37.05
Bra000713.1-P	Field mustard	plastid	34.68	36.86
Bra007204.1-P	Field mustard	cytosol	61.02	36.55
Bra013652.1-P	Field mustard	cytosol	34.14	35.47
Bra000712.1-P	Field mustard	cytosol, nucleus, peroxisome	32.8	34.76
Bra019350.1-P	Field mustard	cytosol	33.33	34.73
Bra029414.1-P	Field mustard	plastid	31.45	34.31
Bra037921.1-P	Field mustard	cytosol	32.26	34.19
Bra038647.1-P	Field mustard	cytosol	27.96	33.88
Bra037747.1-P	Field mustard	cytosol	27.96	33.12
Bra038648.1-P	Field mustard	cytosol	26.34	33.0
Bra029211.1-P	Field mustard	cytosol	27.42	32.9
Bra014500.1-P	Field mustard	cytosol	31.45	32.77
Bra017227.1-P	Field mustard	cytosol	31.72	32.15
Bra036828.1-P	Field mustard	cytosol	30.11	31.28
Bra012862.1-P	Field mustard	cytosol	29.03	30.86
Bra004867.1-P	Field mustard	cytosol	29.57	30.64
Bra028696.1-P	Field mustard	cytosol	28.23	29.09
Bra009771.1-P	Field mustard	mitochondrion	32.53	28.95
Bra009258.1-P	Field mustard	cytosol, nucleus, peroxisome	20.97	28.26
Bra014831.1-P	Field mustard	cytosol	24.19	27.95
Bra029212.1-P	Field mustard	cytosol	28.23	24.88

Protein Annotations

Gene3D:2.60.120.330	MapMan:50.1.13	EnsemblPlantsGene:Bra005860	EnsemblPlants:Bra005860.1	EnsemblPlants:Bra005860.1-P	InterPro:DIOX_N
GO:GO:0003674	GO:GO:0003824	GO:GO:0005488	GO:GO:0008150	GO:GO:0008152	GO:GO:0016491
GO:GO:0046872	GO:GO:0055114	InterPro:IPNS-like	InterPro:IPR005123	InterPro:IPR027443	UniProt:M4CNS2
InterPro:Oxoglu/Fe-dep_dioxygenase	PFAM:PF03171	PFAM:PF14226	PRINTS:PR00682	PFscan:PS51471	PANTHER:PTHR10209
PANTHER:PTHR10209:SF134	SUPFAM:SSF51197	UniParc:UPI000253FC75	:	:	:

Description

AT5G05600 (E=2e-199) | oxidoreductase, 2OG-Fe(II) oxygenase family protein

Coordinates

chrA03:+:966239..968667

Molecular Weight (calculated)

42379.4 Da

IEP (calculated)

5.802

GRAVY (calculated)

-0.472

Length

372 amino acids

Sequence
(BLAST)

001: MTKNKKEVNI ETRKGSTMDE WPEPIVRVQS LAESNLSSLP DRYIKPASQR PTTIEEAPAA TNIPIIDLEG LFSEDGSPDE AIMAQISEAC REWGFFQVLN
101: HGVRPELMDA ARENWREFFH LPVNEKETYR NSPKTYEGYG SRLGVEKGAI LDWSDYYFLH LLPLHLKDFN KWPSFPPTIR EVIDEYGKEV VNLCGRVMKV
201: LSLNLGLKED EFQDAFGGEN IGACLRVNYY PKCPRPELAL GLSSHSDPGG MTILLPDDQV FGLQVRKNDM WITVKPHPHA FIVNIGDQIQ ILSNSAYKSV
301: EHRVIVNSEK ERVSLAFFYN PKSDIPIQPL QELVSTHNPP LYPPMTFDQY RLFIRTQGPQ GKSHVESHVS PR

Best Arabidopsis Sequence Match ( AT5G05600.1 )
(BLAST)

001: MNKNKIDVKI ETKKGSMDEW PEPIVRVQSL AESNLSSLPD RYIKPASLRP TTTEDAPTAT NIPIIDLEGL FSEEGLSDDV IMARISEACR GWGFFQVVNH
101: GVKPELMDAA RENWREFFHM PVNAKETYSN SPRTYEGYGS RLGVEKGASL DWSDYYFLHL LPHHLKDFNK WPSFPPTIRE VIDEYGEELV KLSGRIMRVL
201: STNLGLKEDK FQEAFGGENI GACLRVNYYP KCPRPELALG LSPHSDPGGM TILLPDDQVF GLQVRKDDTW ITVKPHPHAF IVNIGDQIQI LSNSTYKSVE
301: HRVIVNSDKE RVSLAFFYNP KSDIPIQPLQ ELVSTHNPPL YPPMTFDQYR LFIRTQGPQG KSHVESHISP R

Arabidopsis Description

Probable 2-oxoglutarate-dependent dioxygenase At5g05600 [Source:UniProtKB/Swiss-Prot;Acc:Q9FFF6]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.