Factsheet for AT5G05600.1

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 3
peroxisome 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, peroxisome
BaCelLo:	cytosol
MultiLoc:	peroxisome
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY04960	Canola	cytosol	90.84	90.59
Bra028752.1-P	Field mustard	cytosol	90.57	90.32
Bra005860.1-P	Field mustard	cytosol	89.49	89.25
CDY11329	Canola	cytosol	89.49	89.25
CDX80966	Canola	cytosol	88.95	88.71
CDY14105	Canola	cytosol, nucleus, peroxisome	91.11	88.02
KRH14938	Soybean	cytosol	68.19	70.08
KRG97722	Soybean	cytosol	68.19	70.08
KRH31155	Soybean	cytosol	66.85	68.7
AT3G11180.2	Thale cress	cytosol	74.12	68.24
VIT_13s0067g01020.t01	Wine grape	cytosol	65.23	67.41
Solyc03g096050.2.1	Tomato	cytosol	63.88	66.39
KRH73197	Soybean	cytosol	67.39	66.14
PGSC0003DMT400031149	Potato	cytosol	63.34	66.01
AT3G55970.1	Thale cress	cytosol	60.92	62.26
GSMUA_Achr7P15540_001	Banana	cytosol	57.68	60.45
GSMUA_Achr6P15610_001	Banana	cytosol	56.33	59.38
TraesCS1B01G088600.1	Wheat	cytoskeleton, cytosol, peroxisome	54.45	56.42
EES18946	Sorghum	cytosol	55.53	56.28
TraesCS1A01G070200.1	Wheat	cytoskeleton, cytosol, peroxisome	54.18	56.15
TraesCS1D01G072700.1	Wheat	cytoskeleton, cytosol, peroxisome	54.18	56.15
AT2G38240.1	Thale cress	plastid	53.1	55.81
Os01t0832600-01	Rice	cytosol	54.72	55.46
TraesCS3D01G345600.1	Wheat	cytosol	56.06	55.03
TraesCS3B01G383900.1	Wheat	cytosol	55.26	54.96
TraesCS3A01G351400.2	Wheat	cytosol	56.06	54.88
HORVU1Hr1G015050.7	Barley	cytosol, peroxisome	53.64	54.82
TraesCS4A01G109200.1	Wheat	cytosol	53.37	53.8
TraesCS4B01G195000.1	Wheat	cytosol	53.1	53.53
HORVU4Hr1G056500.2	Barley	cytosol, peroxisome, plastid	53.37	53.37
EES01705	Sorghum	cytosol	55.8	53.35
Zm00001d042980_P002	Maize	cytosol	53.64	53.21
Zm00001d028744_P001	Maize	cytosol	53.91	53.19
TraesCS4D01G195700.1	Wheat	cytosol	52.56	52.99
Os05t0127500-01	Rice	cytosol	52.56	52.99
Zm00001d035462_P001	Maize	cytosol	53.64	52.09
EER92419	Sorghum	cytosol	53.37	51.7
TraesCS4B01G328300.1	Wheat	cytosol	37.2	51.49
Os03t0289800-01	Rice	cytosol	53.64	51.42
HORVU3Hr1G087570.4	Barley	cytosol, peroxisome, plastid	54.18	49.14
Zm00001d047744_P001	Maize	mitochondrion	53.91	49.14
Zm00001d012456_P004	Maize	plastid	54.72	43.01
AT5G08640.1	Thale cress	cytosol	33.96	37.5
AT4G10490.1	Thale cress	cytosol	33.69	35.92
AT4G10500.1	Thale cress	plastid	33.69	35.82
AT5G63580.1	Thale cress	cytoskeleton, cytosol, peroxisome	23.99	35.6
AT5G63590.1	Thale cress	cytoskeleton, cytosol, peroxisome	28.84	34.74
AT5G24530.1	Thale cress	mitochondrion	31.81	34.6
AT4G22880.2	Thale cress	cytosol	32.61	33.99
AT5G43935.1	Thale cress	cytosol	26.42	33.45
AT3G60290.1	Thale cress	cytosol, nucleus, peroxisome	32.08	33.33
AT3G51240.1	Thale cress	cytosol	31.81	32.96
AT5G63600.2	Thale cress	cytosol	28.57	32.52
AT2G36690.1	Thale cress	cytosol, nucleus, peroxisome	32.08	32.51
AT4G16330.2	Thale cress	plastid	31.81	32.42
AT2G44800.1	Thale cress	cytosol, nucleus, peroxisome, plastid	29.92	31.09
AT5G63595.1	Thale cress	cytoskeleton, cytosol, peroxisome	23.18	30.82
AT5G07480.1	Thale cress	cytosol	29.11	30.34

Protein Annotations

Gene3D:2.60.120.330	MapMan:50.1.13	EntrezGene:830443	ProteinID:AED90897.1	ArrayExpress:AT5G05600	EnsemblPlantsGene:AT5G05600
RefSeq:AT5G05600	TAIR:AT5G05600	RefSeq:AT5G05600-TAIR-G	EnsemblPlants:AT5G05600.1	TAIR:AT5G05600.1	EMBL:AY039893
EMBL:AY085111	EMBL:AY133665	Unigene:At.8725	ProteinID:BAB11549.1	InterPro:DIOX_N	GO:GO:0003674
GO:GO:0003824	GO:GO:0005488	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005737
GO:GO:0005829	GO:GO:0007154	GO:GO:0007165	GO:GO:0008150	GO:GO:0008152	GO:GO:0009058
GO:GO:0009628	GO:GO:0009719	GO:GO:0009813	GO:GO:0009987	GO:GO:0016491	GO:GO:0016787
GO:GO:0046872	GO:GO:0051213	GO:GO:0055114	GO:GO:0080167	GO:GO:0097237	GO:GO:0120091
GO:GO:2000022	InterPro:IPNS-like	InterPro:IPR005123	InterPro:IPR027443	RefSeq:NP_196179.1	InterPro:Oxoglu/Fe-dep_dioxygenase
PFAM:PF03171	PFAM:PF14226	PO:PO:0000037	PO:PO:0000293	PO:PO:0001185	PO:PO:0007064
PO:PO:0007095	PO:PO:0007098	PO:PO:0007103	PO:PO:0007115	PO:PO:0007123	PO:PO:0007611
PO:PO:0007616	PO:PO:0009005	PO:PO:0009009	PO:PO:0009025	PO:PO:0009029	PO:PO:0009030
PO:PO:0009031	PO:PO:0009032	PO:PO:0009046	PO:PO:0009047	PO:PO:0009052	PO:PO:0020030
PO:PO:0020137	PO:PO:0025022	PO:PO:0025281	PRINTS:PR00682	PFscan:PS51471	PANTHER:PTHR10209
PANTHER:PTHR10209:SF134	UniProt:Q9FFF6	SUPFAM:SSF51197	UniParc:UPI0000048ACF	:	:

Description

Probable 2-oxoglutarate-dependent dioxygenase At5g05600 [Source:UniProtKB/Swiss-Prot;Acc:Q9FFF6]

Coordinates

chr5:+:1672070..1674770

Molecular Weight (calculated)

42179.2 Da

IEP (calculated)

6.242

GRAVY (calculated)

-0.482

Length

371 amino acids

Sequence
(BLAST)

001: MNKNKIDVKI ETKKGSMDEW PEPIVRVQSL AESNLSSLPD RYIKPASLRP TTTEDAPTAT NIPIIDLEGL FSEEGLSDDV IMARISEACR GWGFFQVVNH
101: GVKPELMDAA RENWREFFHM PVNAKETYSN SPRTYEGYGS RLGVEKGASL DWSDYYFLHL LPHHLKDFNK WPSFPPTIRE VIDEYGEELV KLSGRIMRVL
201: STNLGLKEDK FQEAFGGENI GACLRVNYYP KCPRPELALG LSPHSDPGGM TILLPDDQVF GLQVRKDDTW ITVKPHPHAF IVNIGDQIQI LSNSTYKSVE
301: HRVIVNSDKE RVSLAFFYNP KSDIPIQPLQ ELVSTHNPPL YPPMTFDQYR LFIRTQGPQG KSHVESHISP R

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.