Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 1
- peroxisome 1
- mitochondrion 1
- cytosol 2
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra014716.1-P | Field mustard | cytosol | 88.71 | 87.98 |
| CDX76068 | Canola | cytosol | 88.71 | 87.98 |
| CDY02966 | Canola | cytosol | 87.33 | 87.09 |
| KRH14938 | Soybean | cytosol | 65.01 | 65.37 |
| VIT_13s0067g01020.t01 | Wine grape | cytosol | 64.19 | 64.9 |
| KRH31155 | Soybean | cytosol | 63.91 | 64.27 |
| KRG97722 | Soybean | cytosol | 63.64 | 63.99 |
| Solyc03g096050.2.1 | Tomato | cytosol | 60.88 | 61.9 |
| CDX72185 | Canola | nucleus | 85.95 | 61.9 |
| PGSC0003DMT400031149 | Potato | cytosol | 60.33 | 61.52 |
| KRH73197 | Soybean | cytosol | 63.91 | 61.38 |
| AT5G05600.1 | Thale cress | cytosol | 62.26 | 60.92 |
| GSMUA_Achr6P15610_001 | Banana | cytosol | 55.37 | 57.1 |
| AT3G11180.2 | Thale cress | cytosol | 63.09 | 56.82 |
| TraesCS1B01G088600.1 | Wheat | cytoskeleton, cytosol, peroxisome | 54.27 | 55.03 |
| TraesCS1D01G072700.1 | Wheat | cytoskeleton, cytosol, peroxisome | 53.72 | 54.47 |
| AT2G38240.1 | Thale cress | plastid | 52.89 | 54.39 |
| GSMUA_Achr7P15540_001 | Banana | cytosol | 52.89 | 54.24 |
| TraesCS1A01G070200.1 | Wheat | cytoskeleton, cytosol, peroxisome | 53.44 | 54.19 |
| EES18946 | Sorghum | cytosol | 53.72 | 53.28 |
| Os01t0832600-01 | Rice | cytosol | 53.44 | 53.01 |
| TraesCS3D01G345600.1 | Wheat | cytosol | 55.1 | 52.91 |
| HORVU1Hr1G015050.7 | Barley | cytosol, peroxisome | 52.89 | 52.89 |
| TraesCS3A01G351400.2 | Wheat | cytosol | 55.1 | 52.77 |
| TraesCS4A01G109200.1 | Wheat | cytosol | 53.44 | 52.72 |
| TraesCS3B01G383900.1 | Wheat | cytosol | 53.99 | 52.55 |
| TraesCS4B01G195000.1 | Wheat | cytosol | 53.17 | 52.45 |
| HORVU4Hr1G056500.2 | Barley | cytosol, peroxisome, plastid | 53.17 | 52.02 |
| Zm00001d028744_P001 | Maize | cytosol | 53.44 | 51.6 |
| TraesCS4D01G195700.1 | Wheat | cytosol | 52.07 | 51.36 |
| Zm00001d042980_P002 | Maize | cytosol | 52.62 | 51.07 |
| EES01705 | Sorghum | cytosol | 54.27 | 50.77 |
| Os05t0127500-01 | Rice | cytosol | 51.24 | 50.54 |
| Bra007204.1-P | Field mustard | cytosol | 85.95 | 50.24 |
| Zm00001d035462_P001 | Maize | cytosol | 52.62 | 50.0 |
| CDY27251 | Canola | nucleus | 85.12 | 49.76 |
| TraesCS4B01G328300.1 | Wheat | cytosol | 36.64 | 49.63 |
| EER92419 | Sorghum | cytosol | 52.07 | 49.35 |
| HORVU3Hr1G087570.4 | Barley | cytosol, peroxisome, plastid | 54.27 | 48.17 |
| Os03t0289800-01 | Rice | cytosol | 50.96 | 47.8 |
| Zm00001d047744_P001 | Maize | mitochondrion | 52.89 | 47.17 |
| Zm00001d012456_P004 | Maize | plastid | 53.99 | 41.53 |
| AT5G08640.1 | Thale cress | cytosol | 34.44 | 37.2 |
| AT5G63580.1 | Thale cress | cytoskeleton, cytosol, peroxisome | 24.79 | 36.0 |
| AT4G10500.1 | Thale cress | plastid | 34.16 | 35.53 |
| AT4G10490.1 | Thale cress | cytosol | 33.88 | 35.34 |
| AT5G24530.1 | Thale cress | mitochondrion | 32.78 | 34.9 |
| AT5G63590.1 | Thale cress | cytoskeleton, cytosol, peroxisome | 28.65 | 33.77 |
| AT3G60290.1 | Thale cress | cytosol, nucleus, peroxisome | 32.51 | 33.05 |
| AT5G43935.1 | Thale cress | cytosol | 26.17 | 32.42 |
| AT4G22880.2 | Thale cress | cytosol | 31.68 | 32.3 |
| AT2G44800.1 | Thale cress | cytosol, nucleus, peroxisome, plastid | 31.41 | 31.93 |
| AT2G36690.1 | Thale cress | cytosol, nucleus, peroxisome | 31.96 | 31.69 |
| AT4G16330.2 | Thale cress | plastid | 31.41 | 31.32 |
| AT3G51240.1 | Thale cress | cytosol | 30.58 | 31.01 |
| AT5G63595.1 | Thale cress | cytoskeleton, cytosol, peroxisome | 23.42 | 30.47 |
| AT5G63600.2 | Thale cress | cytosol | 27.27 | 30.37 |
| AT5G07480.1 | Thale cress | cytosol | 28.65 | 29.21 |
Protein Annotations
| Gene3D:2.60.120.330 | MapMan:50.1.13 | EntrezGene:824763 | UniProt:A0A178V764 | ProteinID:AEE79462.1 | EMBL:AJ298225 |
| EMBL:AK229205 | ArrayExpress:AT3G55970 | EnsemblPlantsGene:AT3G55970 | RefSeq:AT3G55970 | TAIR:AT3G55970 | RefSeq:AT3G55970-TAIR-G |
| EnsemblPlants:AT3G55970.1 | TAIR:AT3G55970.1 | Symbol:ATJRG21 | Unigene:At.5208 | ProteinID:CAB87851.1 | InterPro:DIOX_N |
| GO:GO:0003674 | GO:GO:0003824 | GO:GO:0005488 | GO:GO:0007154 | GO:GO:0007165 | GO:GO:0008150 |
| GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009719 | GO:GO:0009813 | GO:GO:0009987 | GO:GO:0016491 |
| GO:GO:0016787 | GO:GO:0046872 | GO:GO:0051213 | GO:GO:0055114 | GO:GO:0120091 | GO:GO:2000022 |
| InterPro:IPNS-like | InterPro:IPR005123 | InterPro:IPR027443 | RefSeq:NP_191156.1 | ProteinID:OAP01531.1 | InterPro:Oxoglu/Fe-dep_dioxygenase |
| PFAM:PF03171 | PFAM:PF14226 | PO:PO:0000293 | PO:PO:0001185 | PO:PO:0007115 | PO:PO:0007123 |
| PO:PO:0007611 | PO:PO:0007616 | PO:PO:0009009 | PO:PO:0009025 | PO:PO:0009029 | PO:PO:0009030 |
| PO:PO:0009031 | PO:PO:0009032 | PO:PO:0009046 | PO:PO:0009047 | PO:PO:0025022 | PO:PO:0025281 |
| PRINTS:PR00682 | PFscan:PS51471 | PANTHER:PTHR10209 | PANTHER:PTHR10209:SF134 | UniProt:Q9LY48 | SUPFAM:SSF51197 |
| UniParc:UPI0000048871 | : | : | : | : | : |
Description
JRG21JRG21 [Source:UniProtKB/TrEMBL;Acc:A0A178V764]
Coordinates
chr3:-:20766735..20769410
Molecular Weight (calculated)
41444.5 Da
IEP (calculated)
6.672
GRAVY (calculated)
-0.515
Length
363 amino acids
Sequence
(BLAST)
(BLAST)
001: MNIFQDWPEP IVRVQSLSES NLGAIPNRYV KPLSQRPNIT PHNKHNPQTT TIPIIDLGRL YTDDLTLQAK TLDEISKACR ELGFFQVVNH GMSPQLMDQA
101: KATWREFFNL PMELKNMHAN SPKTYEGYGS RLGVEKGAIL DWSDYYYLHY QPSSLKDYTK WPSLPLHCRE ILEDYCKEMV KLCENLMKIL SKNLGLQEDR
201: LQNAFGGKEE SGGCLRVNYY PKCPQPELTL GISPHSDPGG LTILLPDEQV ASLQVRGSDD AWITVEPAPH AFIVNMGDQI QMLSNSIYKS VEHRVIVNPE
301: NERLSLAFFY NPKGNVPIEP LKELVTVDSP ALYSSTTYDR YRQFIRTQGP RSKCHIDELK SPR
101: KATWREFFNL PMELKNMHAN SPKTYEGYGS RLGVEKGAIL DWSDYYYLHY QPSSLKDYTK WPSLPLHCRE ILEDYCKEMV KLCENLMKIL SKNLGLQEDR
201: LQNAFGGKEE SGGCLRVNYY PKCPQPELTL GISPHSDPGG LTILLPDEQV ASLQVRGSDD AWITVEPAPH AFIVNMGDQI QMLSNSIYKS VEHRVIVNPE
301: NERLSLAFFY NPKGNVPIEP LKELVTVDSP ALYSSTTYDR YRQFIRTQGP RSKCHIDELK SPR
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.