Subcellular Localization
min:
: max
Winner_takes_all: peroxisome, cytoskeleton, cytosol
Predictor Summary:
Predictor Summary:
- peroxisome 1
- mitochondrion 1
- cytoskeleton 1
- cytosol 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS1B01G088600.1 | Wheat | cytoskeleton, cytosol, peroxisome | 97.49 | 97.49 |
| TraesCS1A01G070200.1 | Wheat | cytoskeleton, cytosol, peroxisome | 96.65 | 96.65 |
| HORVU1Hr1G015050.7 | Barley | cytosol, peroxisome | 93.02 | 91.74 |
| EES18946 | Sorghum | cytosol | 81.01 | 79.23 |
| Zm00001d035462_P001 | Maize | cytosol | 80.45 | 75.39 |
| Os05t0127500-01 | Rice | cytosol | 73.18 | 71.2 |
| GSMUA_Achr6P15610_001 | Banana | cytosol | 64.25 | 65.34 |
| GSMUA_Achr7P15540_001 | Banana | cytosol | 63.69 | 64.41 |
| TraesCS4D01G195700.1 | Wheat | cytosol | 65.92 | 64.13 |
| PGSC0003DMT400049193 | Potato | cytosol, mitochondrion, peroxisome | 30.73 | 60.11 |
| Bra034168.1-P | Field mustard | cytosol | 48.04 | 59.52 |
| KRH38051 | Soybean | cytosol, peroxisome | 32.12 | 59.28 |
| VIT_13s0067g01020.t01 | Wine grape | cytosol | 58.94 | 58.77 |
| KRH14938 | Soybean | cytosol | 58.94 | 58.45 |
| TraesCS3D01G345600.1 | Wheat | cytosol | 61.45 | 58.2 |
| KRG97722 | Soybean | cytosol | 58.66 | 58.17 |
| KRH31155 | Soybean | cytosol | 58.1 | 57.62 |
| PGSC0003DMT400031149 | Potato | cytosol | 56.7 | 57.02 |
| VIT_08s0105g00380.t01 | Wine grape | cytosol | 56.98 | 56.98 |
| Solyc03g096050.2.1 | Tomato | cytosol | 56.15 | 56.3 |
| Solyc10g076660.1.1 | Tomato | cytosol | 57.26 | 56.16 |
| KRH73197 | Soybean | cytosol | 58.94 | 55.82 |
| KRH65721 | Soybean | cytosol | 58.1 | 55.76 |
| KRH00254 | Soybean | plastid | 54.19 | 55.75 |
| CDY04960 | Canola | cytosol | 57.54 | 55.38 |
| AT2G38240.1 | Thale cress | plastid | 54.47 | 55.24 |
| TraesCS5D01G159800.1 | Wheat | plastid | 56.42 | 55.19 |
| Bra028752.1-P | Field mustard | cytosol | 57.26 | 55.11 |
| Bra000045.1-P | Field mustard | plastid | 54.19 | 54.96 |
| CDY07746 | Canola | plastid | 54.19 | 54.96 |
| PGSC0003DMT400049192 | Potato | cytosol | 56.15 | 54.92 |
| CDX93319 | Canola | plastid | 53.91 | 54.67 |
| CDY68873 | Canola | plastid | 53.91 | 54.67 |
| Bra017132.1-P | Field mustard | plastid | 53.91 | 54.52 |
| CDY18399 | Canola | plastid | 53.91 | 54.52 |
| CDY14476 | Canola | plastid | 53.63 | 54.39 |
| CDY11329 | Canola | cytosol | 56.42 | 54.3 |
| Bra005860.1-P | Field mustard | cytosol | 56.42 | 54.3 |
| AT5G05600.1 | Thale cress | cytosol | 56.15 | 54.18 |
| CDY14105 | Canola | cytosol, nucleus, peroxisome | 57.82 | 53.91 |
| CDX80966 | Canola | cytosol | 55.87 | 53.76 |
| AT3G55970.1 | Thale cress | cytosol | 54.47 | 53.72 |
| CDY02966 | Canola | cytosol | 54.19 | 53.3 |
| Bra014716.1-P | Field mustard | cytosol | 54.47 | 53.28 |
| KRH49391 | Soybean | cytosol | 56.7 | 53.14 |
| CDX76068 | Canola | cytosol | 54.19 | 53.01 |
| PGSC0003DMT400028828 | Potato | cytosol | 52.51 | 52.22 |
| Solyc10g085190.1.1 | Tomato | cytosol | 51.96 | 51.52 |
| Solyc10g076670.1.1 | Tomato | cytosol | 30.45 | 48.88 |
| CDY08545 | Canola | cytosol | 54.75 | 48.4 |
| Bra034861.1-P | Field mustard | cytosol | 54.75 | 48.4 |
| AT3G11180.2 | Thale cress | cytosol | 54.47 | 48.39 |
| CDY01001 | Canola | cytosol | 54.47 | 48.15 |
| TraesCS7D01G119600.1 | Wheat | plastid | 39.39 | 40.99 |
| TraesCS4D01G339800.1 | Wheat | cytosol, plastid | 36.59 | 38.99 |
| TraesCS6D01G310700.1 | Wheat | plastid | 35.2 | 37.72 |
| CDX72185 | Canola | nucleus | 52.79 | 37.5 |
| TraesCS4D01G341800.1 | Wheat | cytosol | 34.92 | 37.2 |
| TraesCS2D01G392800.1 | Wheat | cytosol | 35.2 | 37.06 |
| TraesCS6D01G270600.1 | Wheat | plastid | 33.52 | 35.29 |
| TraesCS7D01G160100.2 | Wheat | plastid | 32.4 | 34.83 |
| TraesCS6D01G270700.1 | Wheat | cytosol, peroxisome, plastid | 32.68 | 34.41 |
| TraesCS7D01G279500.1 | Wheat | cytosol | 36.03 | 33.77 |
| TraesCS6D01G038900.1 | Wheat | cytosol | 29.89 | 33.33 |
| TraesCS6D01G270500.1 | Wheat | plastid | 31.56 | 32.94 |
| TraesCS2D01G487400.1 | Wheat | cytosol, nucleus, peroxisome | 16.76 | 32.09 |
| TraesCS3D01G437500.2 | Wheat | cytosol | 30.45 | 31.32 |
| TraesCS6D01G038500.1 | Wheat | plastid | 29.89 | 30.92 |
| TraesCS3D01G405500.1 | Wheat | cytosol | 29.89 | 30.66 |
| Bra007204.1-P | Field mustard | cytosol | 53.07 | 30.6 |
| TraesCS6D01G035200.1 | Wheat | cytosol | 29.61 | 30.46 |
| CDY27251 | Canola | nucleus | 52.51 | 30.27 |
| TraesCS2D01G392900.1 | Wheat | plastid | 32.96 | 30.26 |
| TraesCS4D01G002800.1 | Wheat | cytosol, plastid | 32.4 | 29.67 |
| TraesCS6D01G004300.1 | Wheat | cytosol | 36.03 | 29.45 |
| TraesCS2D01G493400.1 | Wheat | golgi, nucleus | 31.01 | 29.37 |
| TraesCS3D01G411700.1 | Wheat | cytosol | 23.74 | 28.15 |
| TraesCS2D01G539400.1 | Wheat | cytosol, nucleus, peroxisome | 24.86 | 27.13 |
| TraesCS2D01G539600.1 | Wheat | mitochondrion, plastid | 25.42 | 26.76 |
| TraesCS5D01G058700.2 | Wheat | cytosol | 26.26 | 24.93 |
| TraesCS6D01G000600.1 | Wheat | mitochondrion | 16.48 | 23.14 |
| TraesCS3D01G316200.1 | Wheat | cytosol | 23.74 | 21.09 |
Protein Annotations
| EnsemblPlants:TraesCS1D01G072700.1 | EnsemblPlantsGene:TraesCS1D01G072700 | Gene3D:2.60.120.330 | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0008150 |
| GO:GO:0008152 | GO:GO:0016491 | GO:GO:0055114 | InterPro:DIOX_N | InterPro:IPNS-like | InterPro:IPR005123 |
| InterPro:IPR027443 | InterPro:Oxoglu/Fe-dep_dioxygenase | PANTHER:PTHR10209 | PANTHER:PTHR10209:SF92 | PFAM:PF03171 | PFAM:PF14226 |
| PFscan:PS51471 | PRINTS:PR00682 | SEG:seg | SUPFAM:SSF51197 | MapMan:50.1.13 | : |
Description
No Description!
Coordinates
chr1D:+:53230932..53235414
Molecular Weight (calculated)
39137.4 Da
IEP (calculated)
7.574
GRAVY (calculated)
-0.344
Length
358 amino acids
Sequence
(BLAST)
(BLAST)
001: MEAAGWPEPV VRVQSLSESG AATIPDRYVK PVHDRPSVHN GTTSGSVSIP VVDLSSPDGS AATARAVSEA CREWGFFQAV NHGVPRELLR RARAAWRGFF
101: RLPVEAKQRY ANSPATYEGY GSRLGVERGA VLDWGDYYFL HLRPPSSLSA ADKWPRLPPD LRDATEEYGR EVASLCERLM AAMSAGLGVG PGRLQEEFGG
201: AEGAGVCVRV NYYPRCPQPE LTLGLSSHSD PGGMTVLLAD ERVRGLQVRG RGGEWVTVDP IADAFIVNVG DQIQVLTNAT YRSVEHRVMV NADAERLSVA
301: MFYNPRSDLP LAPMAELVSP GAPALYKPMT FDEYRLYIRR KGPRGKSQVE SLKAHGDR
101: RLPVEAKQRY ANSPATYEGY GSRLGVERGA VLDWGDYYFL HLRPPSSLSA ADKWPRLPPD LRDATEEYGR EVASLCERLM AAMSAGLGVG PGRLQEEFGG
201: AEGAGVCVRV NYYPRCPQPE LTLGLSSHSD PGGMTVLLAD ERVRGLQVRG RGGEWVTVDP IADAFIVNVG DQIQVLTNAT YRSVEHRVMV NADAERLSVA
301: MFYNPRSDLP LAPMAELVSP GAPALYKPMT FDEYRLYIRR KGPRGKSQVE SLKAHGDR
001: MNNLDEIKIE SKTCLNDQEQ EVKIDNMHMS DQDKNKIEIK NKSGLGEKWP EPIVRVQSLA ESNLTSLPDR YIKPPSQRPQ TTIIDHQPEV ADINIPIIDL
101: DSLFSGNEDD KKRISEACRE WGFFQVINHG VKPELMDAAR ETWKSFFNLP VEAKEVYSNS PRTYEGYGSR LGVEKGAILD WNDYYYLHFL PLALKDFNKW
201: PSLPSNIREM NDEYGKELVK LGGRLMTILS SNLGLRAEQL QEAFGGEDVG ACLRVNYYPK CPQPELALGL SPHSDPGGMT ILLPDDQVVG LQVRHGDTWI
301: TVNPLRHAFI VNIGDQIQIL SNSKYKSVEH RVIVNSEKER VSLAFFYNPK SDIPIQPMQQ LVTSTMPPLY PPMTFDQYRL FIRTQGPRGK SHVESHISPR
101: DSLFSGNEDD KKRISEACRE WGFFQVINHG VKPELMDAAR ETWKSFFNLP VEAKEVYSNS PRTYEGYGSR LGVEKGAILD WNDYYYLHFL PLALKDFNKW
201: PSLPSNIREM NDEYGKELVK LGGRLMTILS SNLGLRAEQL QEAFGGEDVG ACLRVNYYPK CPQPELALGL SPHSDPGGMT ILLPDDQVVG LQVRHGDTWI
301: TVNPLRHAFI VNIGDQIQIL SNSKYKSVEH RVIVNSEKER VSLAFFYNPK SDIPIQPMQQ LVTSTMPPLY PPMTFDQYRL FIRTQGPRGK SHVESHISPR
Arabidopsis Description
2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein [Source:UniProtKB/TrEMBL;Acc:F4J670]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.