Factsheet for TraesCS6D01G038500.1

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

peroxisome 1
mitochondrion 1
plastid 2
cytosol 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plastid
Any Predictor:	cytosol, peroxisome, plastid
MultiLoc:	peroxisome
Predotar:	plastid
PProwler:	mitochondrion
WoLF PSORT:	plastid
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS6A01G033300.1	Wheat	plastid	95.95	95.95
TraesCS6B01G046800.1	Wheat	plastid	94.51	94.51
TraesCS3D01G405500.1	Wheat	cytosol	77.75	77.08
HORVU1Hr1G071670.2	Barley	cytosol	90.75	76.03
TraesCS6D01G035200.1	Wheat	cytosol	71.68	71.26
TraesCS3D01G437500.2	Wheat	cytosol	58.96	58.62
TraesCS7D01G160100.2	Wheat	plastid	49.13	51.05
TraesCS6D01G038900.1	Wheat	cytosol	44.51	47.98
TraesCS6D01G000600.1	Wheat	mitochondrion	33.53	45.49
TraesCS6D01G270600.1	Wheat	plastid	43.35	44.12
TraesCS6D01G270500.1	Wheat	plastid	43.64	44.02
TraesCS6D01G270700.1	Wheat	cytosol, peroxisome, plastid	41.91	42.65
KRH32174	Soybean	cytosol	40.17	40.76
VIT_07s0005g03150.t01	Wine grape	cytosol, peroxisome, plastid	40.17	40.76
TraesCS3D01G411700.1	Wheat	cytosol	34.1	39.07
TraesCS4D01G341800.1	Wheat	cytosol	35.55	36.61
KRG93692	Soybean	cytosol, nucleus, peroxisome	35.55	36.5
KRH18340	Soybean	cytosol	35.55	36.5
PGSC0003DMT400054579	Potato	cytosol	35.55	36.07
PGSC0003DMT400025139	Potato	cytosol	34.68	35.93
Solyc06g083910.2.1	Tomato	cytosol	34.68	35.61
PGSC0003DMT400030676	Potato	mitochondrion	34.97	35.48
PGSC0003DMT400051681	Potato	cytosol	34.39	35.31
KRH01377	Soybean	cytosol, plastid	34.39	35.21
Solyc02g070080.2.1	Tomato	cytosol	34.97	35.07
TraesCS2D01G392800.1	Wheat	cytosol	34.1	34.71
PGSC0003DMT400025148	Potato	cytosol	27.75	34.53
Solyc10g018190.1.1	Tomato	cytosol	32.37	34.25
Solyc07g043420.2.1	Tomato	cytosol	33.81	34.21
Solyc09g066320.1.1	Tomato	cytosol, nucleus, peroxisome	30.35	34.09
Solyc11g010410.1.1	Tomato	cytosol	32.95	33.93
Solyc09g066310.2.1	Tomato	cytosol	32.08	33.74
PGSC0003DMT400025150	Potato	cytosol	32.08	33.74
PGSC0003DMT400041798	Potato	cytosol	32.37	33.33
Solyc11g010400.1.1	Tomato	cytosol	32.08	33.04
Solyc10g018170.1.1	Tomato	cytosol	19.65	31.92
TraesCS7D01G119600.1	Wheat	plastid	31.5	31.69
TraesCS2D01G487400.1	Wheat	cytosol, nucleus, peroxisome	17.05	31.55
Solyc11g072200.1.1	Tomato	cytosol, peroxisome, plastid	31.79	31.25
TraesCS4D01G339800.1	Wheat	cytosol, plastid	30.35	31.25
PGSC0003DMT400070444	Potato	cytosol, peroxisome, plastid	31.79	31.25
TraesCS2D01G539400.1	Wheat	cytosol, nucleus, peroxisome	29.48	31.1
TraesCS5D01G058700.2	Wheat	cytosol	33.81	31.03
TraesCS2D01G392900.1	Wheat	plastid	34.68	30.77
Solyc06g073580.2.1	Tomato	cytosol	31.21	30.59
TraesCS1D01G072700.1	Wheat	cytoskeleton, cytosol, peroxisome	30.92	29.89
TraesCS3D01G345600.1	Wheat	cytosol	32.37	29.63
TraesCS5D01G159800.1	Wheat	plastid	31.21	29.51
TraesCS7D01G279500.1	Wheat	cytosol	32.37	29.32
TraesCS2D01G539600.1	Wheat	mitochondrion, plastid	28.61	29.12
KRH45093	Soybean	cytosol, mitochondrion, nucleus, peroxisome	27.46	29.05
TraesCS6D01G310700.1	Wheat	plastid	27.46	28.44
TraesCS4D01G195700.1	Wheat	cytosol	29.48	27.72
TraesCS4D01G002800.1	Wheat	cytosol, plastid	30.92	27.37
TraesCS2D01G493400.1	Wheat	golgi, nucleus	29.19	26.72
TraesCS3D01G316200.1	Wheat	cytosol	28.32	24.32
TraesCS6D01G004300.1	Wheat	cytosol	27.17	21.46

Protein Annotations

EnsemblPlants:TraesCS6D01G038500.1	EnsemblPlantsGene:TraesCS6D01G038500	Gene3D:2.60.120.330	GO:GO:0003674	GO:GO:0003824	GO:GO:0008150
GO:GO:0008152	GO:GO:0016491	GO:GO:0055114	InterPro:DIOX_N	InterPro:IPNS-like	InterPro:IPR005123
InterPro:IPR027443	InterPro:Oxoglu/Fe-dep_dioxygenase	PANTHER:PTHR10209	PANTHER:PTHR10209:SF220	PFAM:PF03171	PFAM:PF14226
PFscan:PS51471	SEG:seg	SUPFAM:SSF51197	MapMan:25.4.3.1.4	:	:

Description

No Description!

Coordinates

chr6D:-:16138351..16139491

Molecular Weight (calculated)

38527.0 Da

IEP (calculated)

5.813

GRAVY (calculated)

-0.173

Length

346 amino acids

Sequence
(BLAST)

001: MELLSNRPAH ASVPDKYVFP PEKRAALLDD APSSDVALPV VDLKRATLSD AGRRRLVAEE IVKAGKEFGF FQVVNHGVAE DVVRAFREAS AEFFAMPAEE
101: KLPYCSDDQS KPFRVASSTS YDRNQTRYWR DYLKLRCHPV SDELVGHWPA RPESFRTSLA EFSEQVHELA QTLLLLIAEG LGLDGGFFAG DLSGGDTQMN
201: VNYYPPCPDP SVTLGLLPHC DRHLLTVLSQ GDVAGLQARY RGRWLLVRPV PGAFIINFGH QMEIVTNGVL ASVEHRALTN SAVARMSVAT LIMPKMDCLI
301: GPAPEMVSEA NPPKFREFVF REFMAAYDTA AASREDVLEY FRIQQH

Best Arabidopsis Sequence Match ( AT2G36690.1 )
(BLAST)

001: MSPSMIAPVM EEENKKYQKG VKHLCENGLT KVPTKYIWPE PDRPILTKSD KLIKPNKNLK LPLIDFAELL GPNRPHVLRT IAEACKTYGF FQVVNHGMEG
101: DVSKNMIDVC KRFFELPYEE RSKYMSSDMS APVRYGTSFN QIKDNVFCWR DFLKLYAHPL PDYLPHWPSS PSDFRSSAAT YAKETKEMFE MMVKAILESL
201: EIDGSDEAAK ELEEGSQVVV VNCYPPCPEP ELTLGMPPHS DYGFLTLLLQ DEVEGLQILY RDEWVTVDPI PGSFVVNVGD HLEIFSNGRY KSVLHRVLVN
301: STKPRISVAS LHSFPLTSVV KPSPKLVDKH NPSQYMDTDF TTFLQYITSR EPKWKNFLES RKIHHV

Arabidopsis Description

2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein [Source:UniProtKB/TrEMBL;Acc:F4INZ9]
SUBAcon: [peroxisome,nucleus,cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.