Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- mitochondrion 2
- peroxisome 1
- cytosol 2
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS5A01G048400.1 | Wheat | cytosol | 79.58 | 88.24 |
| TraesCS5B01G053400.2 | Wheat | cytosol | 87.53 | 83.54 |
| HORVU5Hr1G011540.3 | Barley | cytosol | 82.23 | 80.94 |
| OQU80974 | Sorghum | cytosol, mitochondrion, peroxisome, plastid | 61.54 | 60.89 |
| TraesCS3D01G316200.1 | Wheat | cytosol | 59.42 | 55.58 |
| GSMUA_Achr9P15020_001 | Banana | cytosol | 46.15 | 49.57 |
| KRH53489 | Soybean | cytosol | 38.99 | 40.61 |
| VIT_18s0001g06690.t01 | Wine grape | cytosol | 36.07 | 40.48 |
| Solyc01g105650.2.1 | Tomato | cytosol | 35.28 | 37.36 |
| TraesCS4D01G341800.1 | Wheat | cytosol | 31.3 | 35.12 |
| TraesCS6D01G038500.1 | Wheat | plastid | 31.03 | 33.81 |
| TraesCS2D01G392800.1 | Wheat | cytosol | 30.24 | 33.53 |
| PGSC0003DMT400083728 | Potato | cytosol | 14.59 | 32.93 |
| TraesCS4D01G002800.1 | Wheat | cytosol, plastid | 32.63 | 31.46 |
| TraesCS7D01G119600.1 | Wheat | plastid | 28.38 | 31.1 |
| TraesCS6D01G035200.1 | Wheat | cytosol | 28.65 | 31.03 |
| TraesCS7D01G279500.1 | Wheat | cytosol | 31.3 | 30.89 |
| TraesCS3D01G405500.1 | Wheat | cytosol | 28.38 | 30.66 |
| TraesCS6D01G038900.1 | Wheat | cytosol | 25.99 | 30.53 |
| TraesCS2D01G392900.1 | Wheat | plastid | 31.03 | 30.0 |
| TraesCS6D01G310700.1 | Wheat | plastid | 26.53 | 29.94 |
| TraesCS4D01G339800.1 | Wheat | cytosol, plastid | 26.53 | 29.76 |
| TraesCS7D01G160100.2 | Wheat | plastid | 26.26 | 29.73 |
| TraesCS2D01G487400.1 | Wheat | cytosol, nucleus, peroxisome | 14.32 | 28.88 |
| TraesCS2D01G539600.1 | Wheat | mitochondrion, plastid | 25.99 | 28.82 |
| TraesCS2D01G539400.1 | Wheat | cytosol, nucleus, peroxisome | 24.93 | 28.66 |
| TraesCS3D01G437500.2 | Wheat | cytosol | 26.26 | 28.45 |
| TraesCS3D01G411700.1 | Wheat | cytosol | 22.55 | 28.15 |
| TraesCS6D01G270600.1 | Wheat | plastid | 25.2 | 27.94 |
| TraesCS6D01G270500.1 | Wheat | plastid | 24.93 | 27.41 |
| TraesCS3D01G345600.1 | Wheat | cytosol | 27.32 | 27.25 |
| TraesCS6D01G270700.1 | Wheat | cytosol, peroxisome, plastid | 24.4 | 27.06 |
| TraesCS5D01G159800.1 | Wheat | plastid | 25.73 | 26.5 |
| TraesCS1D01G072700.1 | Wheat | cytoskeleton, cytosol, peroxisome | 24.93 | 26.26 |
| TraesCS2D01G493400.1 | Wheat | golgi, nucleus | 25.99 | 25.93 |
| TraesCS4D01G195700.1 | Wheat | cytosol | 25.2 | 25.82 |
| TraesCS6D01G004300.1 | Wheat | cytosol | 26.26 | 22.6 |
| TraesCS6D01G000600.1 | Wheat | mitochondrion | 14.32 | 21.18 |
| Zm00001d042655_P001 | Maize | cytosol | 1.33 | 4.42 |
Protein Annotations
| EnsemblPlants:TraesCS5D01G058700.2 | EnsemblPlantsGene:TraesCS5D01G058700 | Gene3D:2.60.120.330 | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0008150 |
| GO:GO:0008152 | GO:GO:0016491 | GO:GO:0055114 | InterPro:DIOX_N | InterPro:IPNS-like | InterPro:IPR005123 |
| InterPro:IPR027443 | InterPro:Oxoglu/Fe-dep_dioxygenase | PANTHER:PTHR10209 | PANTHER:PTHR10209:SF369 | PFAM:PF03171 | PFAM:PF14226 |
| PFscan:PS51471 | SEG:seg | SUPFAM:SSF51197 | MapMan:50.1.13 | : | : |
Description
No Description!
Coordinates
chr5D:-:55557796..55559115
Molecular Weight (calculated)
41129.6 Da
IEP (calculated)
6.636
GRAVY (calculated)
-0.189
Length
377 amino acids
Sequence
(BLAST)
(BLAST)
001: MSSTEPLYNV QRVDQQIKPR QPPARPPQIF PLLCLHCTIM ASPPRSPGQP NRPCSEDGIP VVDLAVLVNG DARERSQAVR HLGRACQDWG FFMVTNHGVP
101: EDLQSAMMDA CKELFGLPPE QKAEFMDAGP MDPVRVGTGF NSAVDGARYW RDYVKMFAHP ELHCPAKPDG LRGVAAEYAA RTRGLLLELT AAISESLGLP
201: AGRIAERLDL GSCFQILVGN HYPPCAAGPD DDDGAVGLPA HSDHGLLTLL FQNGVDGLQV KHDGRWLLAK PIPGSFFVIA GDQLEIVSNG RYKGVLHRAL
301: VDRAQARMSC VSLLGPCLDA VVKPVPELAV PPLGLEFRGV KYRDYMEHQQ SNKLNEKGAL DLVRVQRHIL TDTLCSS
101: EDLQSAMMDA CKELFGLPPE QKAEFMDAGP MDPVRVGTGF NSAVDGARYW RDYVKMFAHP ELHCPAKPDG LRGVAAEYAA RTRGLLLELT AAISESLGLP
201: AGRIAERLDL GSCFQILVGN HYPPCAAGPD DDDGAVGLPA HSDHGLLTLL FQNGVDGLQV KHDGRWLLAK PIPGSFFVIA GDQLEIVSNG RYKGVLHRAL
301: VDRAQARMSC VSLLGPCLDA VVKPVPELAV PPLGLEFRGV KYRDYMEHQQ SNKLNEKGAL DLVRVQRHIL TDTLCSS
001: MSPSMIAPVM EEENKKYQKG VKHLCENGLT KVPTKYIWPE PDRPILTKSD KLIKPNKNLK LPLIDFAELL GPNRPHVLRT IAEACKTYGF FQVVNHGMEG
101: DVSKNMIDVC KRFFELPYEE RSKYMSSDMS APVRYGTSFN QIKDNVFCWR DFLKLYAHPL PDYLPHWPSS PSDFRSSAAT YAKETKEMFE MMVKAILESL
201: EIDGSDEAAK ELEEGSQVVV VNCYPPCPEP ELTLGMPPHS DYGFLTLLLQ DEVEGLQILY RDEWVTVDPI PGSFVVNVGD HLEIFSNGRY KSVLHRVLVN
301: STKPRISVAS LHSFPLTSVV KPSPKLVDKH NPSQYMDTDF TTFLQYITSR EPKWKNFLES RKIHHV
101: DVSKNMIDVC KRFFELPYEE RSKYMSSDMS APVRYGTSFN QIKDNVFCWR DFLKLYAHPL PDYLPHWPSS PSDFRSSAAT YAKETKEMFE MMVKAILESL
201: EIDGSDEAAK ELEEGSQVVV VNCYPPCPEP ELTLGMPPHS DYGFLTLLLQ DEVEGLQILY RDEWVTVDPI PGSFVVNVGD HLEIFSNGRY KSVLHRVLVN
301: STKPRISVAS LHSFPLTSVV KPSPKLVDKH NPSQYMDTDF TTFLQYITSR EPKWKNFLES RKIHHV
Arabidopsis Description
2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein [Source:UniProtKB/TrEMBL;Acc:F4INZ9]
SUBAcon: [peroxisome,nucleus,cytosol]
SUBAcon: [peroxisome,nucleus,cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.