Factsheet for TraesCS6D01G004300.1

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

peroxisome 1
mitochondrion 1
cytosol 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, peroxisome
MultiLoc:	peroxisome
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS6A01G001500.1	Wheat	cytosol	96.8	96.8
HORVU5Hr1G094280.1	Barley	cytosol, peroxisome	80.82	91.71
TraesCS6B01G006200.1	Wheat	cytosol	91.32	90.91
TraesCS6A01G041800.1	Wheat	cytosol	80.59	89.82
Os06t0626700-00	Rice	cytosol	57.53	67.56
Os01t0372500-00	Rice	cytosol	57.31	66.93
Zm00001d014914_P001	Maize	cytosol	57.53	63.8
EES04312	Sorghum	cytosol	56.85	62.41
GSMUA_Achr5P04080_001	Banana	cytosol, peroxisome, plastid	43.15	52.5
VIT_02s0025g04720.t01	Wine grape	cytosol, peroxisome, plastid	37.9	46.76
KRH77456	Soybean	cytosol	37.21	46.31
AT4G22880.2	Thale cress	cytosol	36.99	45.51
Bra019350.1-P	Field mustard	cytosol	36.99	45.38
Bra013652.1-P	Field mustard	cytosol	36.76	44.97
CDY41286	Canola	cytosol	36.76	44.97
KRH27988	Soybean	cytosol	36.07	44.89
CDX94133	Canola	cytosol	36.53	44.69
CDY10816	Canola	cytosol	36.3	44.41
CDX98776	Canola	cytosol	36.99	41.22
TraesCS6D01G310700.1	Wheat	plastid	31.28	41.02
Solyc08g080040.2.1	Tomato	cytosol	38.58	40.43
PGSC0003DMT400058554	Potato	cytosol	39.73	38.24
TraesCS4D01G339800.1	Wheat	cytosol, plastid	29.0	37.8
TraesCS1D01G072700.1	Wheat	cytoskeleton, cytosol, peroxisome	29.45	36.03
TraesCS4D01G195700.1	Wheat	cytosol	27.4	32.61
TraesCS3D01G345600.1	Wheat	cytosol	28.08	32.54
TraesCS4D01G341800.1	Wheat	cytosol	24.2	31.55
TraesCS2D01G392800.1	Wheat	cytosol	23.97	30.88
TraesCS5D01G159800.1	Wheat	plastid	25.8	30.87
TraesCS7D01G119600.1	Wheat	plastid	24.2	30.81
TraesCS6D01G038900.1	Wheat	cytosol	20.78	28.35
TraesCS7D01G160100.2	Wheat	plastid	21.0	27.63
TraesCS3D01G405500.1	Wheat	cytosol	21.69	27.22
TraesCS6D01G038500.1	Wheat	plastid	21.46	27.17
TraesCS6D01G270600.1	Wheat	plastid	20.55	26.47
TraesCS5D01G058700.2	Wheat	cytosol	22.6	26.26
TraesCS7D01G279500.1	Wheat	cytosol	22.6	25.92
TraesCS2D01G392900.1	Wheat	plastid	23.06	25.9
TraesCS6D01G270500.1	Wheat	plastid	19.86	25.36
TraesCS6D01G270700.1	Wheat	cytosol, peroxisome, plastid	19.63	25.29
TraesCS6D01G035200.1	Wheat	cytosol	19.86	25.0
TraesCS2D01G493400.1	Wheat	golgi, nucleus	21.46	24.87
TraesCS3D01G437500.2	Wheat	cytosol	19.63	24.71
TraesCS2D01G487400.1	Wheat	cytosol, nucleus, peroxisome	10.5	24.6
TraesCS4D01G002800.1	Wheat	cytosol, plastid	21.46	24.04
TraesCS3D01G411700.1	Wheat	cytosol	15.75	22.85
TraesCS2D01G539600.1	Wheat	mitochondrion, plastid	17.58	22.65
TraesCS2D01G539400.1	Wheat	cytosol, nucleus, peroxisome	16.44	21.95
TraesCS3D01G316200.1	Wheat	cytosol	20.09	21.84
TraesCS6D01G000600.1	Wheat	mitochondrion	9.82	16.86

Protein Annotations

Gene3D:2.60.120.330	MapMan:9.2.2.9.2	InterPro:DIOX_N	GO:GO:0003674	GO:GO:0003824	GO:GO:0006950
GO:GO:0007033	GO:GO:0008150	GO:GO:0008152	GO:GO:0009058	GO:GO:0009611	GO:GO:0009719
GO:GO:0009753	GO:GO:0009987	GO:GO:0010023	GO:GO:0016043	GO:GO:0016491	GO:GO:0019748
GO:GO:0055114	InterPro:IPNS-like	InterPro:IPR005123	InterPro:IPR027443	InterPro:Oxoglu/Fe-dep_dioxygenase	PFAM:PF03171
PFAM:PF14226	PFscan:PS51471	PANTHER:PTHR10209	PANTHER:PTHR10209:SF190	SUPFAM:SSF51197	EnsemblPlantsGene:TraesCS6D01G004300
EnsemblPlants:TraesCS6D01G004300.1	SEG:seg	:	:	:	:

Description

No Description!

Coordinates

chr6D:-:2106938..2108254

Molecular Weight (calculated)

47491.1 Da

IEP (calculated)

4.592

GRAVY (calculated)

-0.325

Length

438 amino acids

Sequence
(BLAST)

001: MARVEALSMS GATAIPAEYV RPQEERQGLG DAYDEAAASW SAAGSPRIPV VDVAAFDAAD PGSPSSLAVV DAVRAAAEEW GVMHVAGHGI PEELIDSLRG
101: AGTGFFRMPI ADKEAYANDP AAGRLEGYGS RLAGSAGEDG KREWEDYLFH MLHPDARADH ALWPAHPPEY VPVTKTFGEH VSALSSRLLA ILSLGLGVPA
201: DTLERRLRLT SGETQVEDDL LLKLKINYYP RCPQPELAVG VEAHTDVSAL SFILTNGVPG LQVLLPGDGQ TWVTARDEPG TLVVHVGDAL EILSNGRYTS
301: VLHRGLVNRQ AVRVSWVVFA EPPPDSVLLR PLPELLADGA EKPRFEPRTF RQHLERKVLK KTNDQEEEEV VKKPPVVAQE EEKEVVKKPP VAGEEEEKGE
401: ATEPLVAGEE EHKVVKKEQS EQEEAKMAPV AANLVEVN

Best Arabidopsis Sequence Match ( AT4G22880.1 )
(BLAST)

001: MVAVERVESL AKSGIISIPK EYIRPKEELE SINDVFLEEK KEDGPQVPTI DLKNIESDDE KIRENCIEEL KKASLDWGVM HLINHGIPAD LMERVKKAGE
101: EFFSLSVEEK EKYANDQATG KIQGYGSKLA NNASGQLEWE DYFFHLAYPE EKRDLSIWPK TPSDYIEATS EYAKCLRLLA TKVFKALSVG LGLEPDRLEK
201: EVGGLEELLL QMKINYYPKC PQPELALGVE AHTDVSALTF ILHNMVPGLQ LFYEGKWVTA KCVPDSIVMH IGDTLEILSN GKYKSILHRG LVNKEKVRIS
301: WAVFCEPPKD KIVLKPLPEM VSVESPAKFP PRTFAQHIEH KLFGKEQEEL VSEKND

Arabidopsis Description

LDOXAT4G22880 protein [Source:UniProtKB/TrEMBL;Acc:Q0WWD6]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.