CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 1
plastid 1
peroxisome 1
cytosol 3
mitochondrion 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d014914_P001	Maize	cytosol	83.21	84.05
Os01t0372500-00	Rice	cytosol	63.16	67.2
Os06t0626700-00	Rice	cytosol	62.66	67.02
TraesCS2B01G613000.1	Wheat	cytosol, extracellular, peroxisome	59.4	65.83
HORVU5Hr1G094280.1	Barley	cytosol, peroxisome	61.9	63.99
TraesCS6A01G041800.1	Wheat	cytosol	59.65	60.56
TraesCS6D01G004300.1	Wheat	cytosol	62.41	56.85
TraesCS6A01G001500.1	Wheat	cytosol	61.9	56.39
GSMUA_Achr5P04080_001	Banana	cytosol, peroxisome, plastid	50.63	56.11
TraesCS6B01G006200.1	Wheat	cytosol	61.65	55.91
AT4G22880.2	Thale cress	cytosol	47.12	52.81
Bra013652.1-P	Field mustard	cytosol	47.12	52.51
Bra019350.1-P	Field mustard	cytosol	46.87	52.38
CDY41286	Canola	cytosol	46.87	52.23
VIT_02s0025g04720.t01	Wine grape	cytosol, peroxisome, plastid	46.37	52.11
CDX94133	Canola	cytosol	46.62	51.96
KRH77456	Soybean	cytosol	45.61	51.7
CDY10816	Canola	cytosol	45.86	51.12
KRH27988	Soybean	cytosol	44.61	50.57
CDX98776	Canola	cytosol	46.37	47.07
Solyc08g080040.2.1	Tomato	cytosol	46.12	44.02
PGSC0003DMT400058554	Potato	cytosol	46.87	41.1
EES07584	Sorghum	cytosol	32.33	38.86
EES00073	Sorghum	cytosol	28.32	36.69
EES18946	Sorghum	cytosol	32.08	34.97
EER94585	Sorghum	cytosol	28.57	33.93
EES01705	Sorghum	cytosol	32.83	33.76
EER92960	Sorghum	cytosol	27.57	32.74
EER92419	Sorghum	cytosol	30.08	31.33
EER87904	Sorghum	plastid	27.07	31.3
EES12710	Sorghum	cytosol, peroxisome, plastid	25.81	29.34
EER95911	Sorghum	cytosol	23.56	28.06
EES15500	Sorghum	cytosol	18.8	27.78
KXG26978	Sorghum	cytosol	23.81	27.7
EES08336	Sorghum	cytosol	26.82	27.02
EES13031	Sorghum	cytosol	25.06	26.74
EES15170	Sorghum	cytosol	27.57	26.7
OQU80974	Sorghum	cytosol, mitochondrion, peroxisome, plastid	23.81	24.93
KXG23558	Sorghum	cytosol	21.3	24.85
EES06032	Sorghum	cytosol	21.8	24.79
EER96378	Sorghum	cytosol	23.31	23.6
EES16047	Sorghum	cytosol	20.05	23.46
KXG23555	Sorghum	cytosol	19.8	23.44
EES16044	Sorghum	cytosol	19.8	23.44
KXG27349	Sorghum	plastid	25.06	23.2
OQU82532	Sorghum	cytosol	18.55	23.05
KXG27374	Sorghum	plastid	19.05	22.82

Protein Annotations

Gene3D:2.60.120.330	EntrezGene:8074150	MapMan:9.2.2.9.2	UniProt:C5XRG4	InterPro:DIOX_N	EnsemblPlants:EES04312
ProteinID:EES04312	ProteinID:EES04312.1	GO:GO:0003674	GO:GO:0003824	GO:GO:0005488	GO:GO:0006950
GO:GO:0007033	GO:GO:0008150	GO:GO:0008152	GO:GO:0009058	GO:GO:0009611	GO:GO:0009719
GO:GO:0009753	GO:GO:0009987	GO:GO:0010023	GO:GO:0016043	GO:GO:0016491	GO:GO:0019748
GO:GO:0046872	GO:GO:0055114	InterPro:IPNS-like	InterPro:IPR005123	InterPro:IPR027443	InterPro:Oxoglu/Fe-dep_dioxygenase
PFAM:PF03171	PFAM:PF14226	PFscan:PS51471	PANTHER:PTHR10209	PANTHER:PTHR10209:SF190	EnsemblPlantsGene:SORBI_3004G000700
SUPFAM:SSF51197	unigene:Sbi.2849	UniParc:UPI0001A85894	RefSeq:XP_002451336.1	SEG:seg	:

Description

hypothetical protein

Coordinates

chr4:+:71139..72677

Molecular Weight (calculated)

43815.6 Da

IEP (calculated)

6.049

GRAVY (calculated)

-0.415

Length

399 amino acids

Sequence
(BLAST)

001: MARVEALSGL SSIPLEYVRP ADERAGLGDA FDLARTHAND HTAPRIPVVD ISPFLDASSS SSQQQRDACV EAVRAAAVDW GVMHIAGHGI PAELMDRLRA
101: AGAAFFALPI QEKEAYANDP AAGRLQGYGS RLATNASGQR EWEDYLFHLL QPDGLADHAL WPAHPPDYVP ATRDFGRRTR ELTTTLLAIL SMGLLGPERG
201: DALEKALITR SQAAAEAAAE QQQQQQQDLD LLLQFKINYY PRCPQPELAV GVETHTDVSA LSFILHNGVP GLQVLHGGRW VTARDEPGTI IVHVGDALEI
301: LSNGRYTSVL HRGLVNREAV RISWVVFAEP PPDAVVLRPL PELVTPDHPA RFTPRTFKQH LDSKLFKKKQ QEQQKADKDG NNNGDHHHDE PPPPQTQTN

Best Arabidopsis Sequence Match ( AT4G22880.1 )
(BLAST)

001: MVAVERVESL AKSGIISIPK EYIRPKEELE SINDVFLEEK KEDGPQVPTI DLKNIESDDE KIRENCIEEL KKASLDWGVM HLINHGIPAD LMERVKKAGE
101: EFFSLSVEEK EKYANDQATG KIQGYGSKLA NNASGQLEWE DYFFHLAYPE EKRDLSIWPK TPSDYIEATS EYAKCLRLLA TKVFKALSVG LGLEPDRLEK
201: EVGGLEELLL QMKINYYPKC PQPELALGVE AHTDVSALTF ILHNMVPGLQ LFYEGKWVTA KCVPDSIVMH IGDTLEILSN GKYKSILHRG LVNKEKVRIS
301: WAVFCEPPKD KIVLKPLPEM VSVESPAKFP PRTFAQHIEH KLFGKEQEEL VSEKND

Arabidopsis Description

LDOXAT4G22880 protein [Source:UniProtKB/TrEMBL;Acc:Q0WWD6]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.