CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 2
plastid 1
cytosol 2
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, nucleus, plastid
BaCelLo:	nucleus
iPSORT:	plastid
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS5A01G154900.1	Wheat	cytosol, nucleus, peroxisome	67.41	49.73
TraesCS5D01G159800.1	Wheat	plastid	67.04	49.45
TraesCS5B01G153100.1	Wheat	cytosol, nucleus, peroxisome	67.04	49.45
HORVU5Hr1G048180.23	Barley	cytosol, nucleus, peroxisome	66.3	46.25
EES18946	Sorghum	cytosol	49.26	36.34
EER92419	Sorghum	cytosol	45.19	31.85
EES01705	Sorghum	cytosol	44.81	31.19
EER94585	Sorghum	cytosol	32.22	25.89
EER87904	Sorghum	plastid	32.96	25.8
EES12710	Sorghum	cytosol, peroxisome, plastid	31.48	24.22
KXG26978	Sorghum	cytosol	30.74	24.2
EER92960	Sorghum	cytosol	30.0	24.11
EES07584	Sorghum	cytosol	28.15	22.89
KXG23558	Sorghum	cytosol	28.15	22.22
EER95911	Sorghum	cytosol	27.41	22.09
EES13031	Sorghum	cytosol	29.63	21.39
KXG23555	Sorghum	cytosol	26.67	21.36
EES16044	Sorghum	cytosol	26.67	21.36
EES06032	Sorghum	cytosol	27.41	21.08
OQU82532	Sorghum	cytosol	24.81	20.87
EES16047	Sorghum	cytosol	26.3	20.82
EES00073	Sorghum	cytosol	22.96	20.13
EER96378	Sorghum	cytosol	29.26	20.05
EES08336	Sorghum	cytosol	29.26	19.95
KXG27374	Sorghum	plastid	23.7	19.22
EES15170	Sorghum	cytosol	29.26	19.17
EES04312	Sorghum	cytosol	27.78	18.8
KXG27349	Sorghum	plastid	29.26	18.33
OQU80974	Sorghum	cytosol, mitochondrion, peroxisome, plastid	24.81	17.59

Protein Annotations

EnsemblPlants:EES15500	EnsemblPlantsGene:SORBI_3008G002600	Gene3D:2.60.120.330	InterPro:DIOX_N	InterPro:IPNS-like	InterPro:IPR027443
PANTHER:PTHR10209	PANTHER:PTHR10209:SF143	PFAM:PF14226	ProteinID:EES15500	ProteinID:EES15500.2	SUPFAM:SSF51197
UniParc:UPI00081ADBFB	UniProt:C5YQ07	MapMan:50.1.13	:	:	:

Description

hypothetical protein

Coordinates

chr8:+:239466..241554

Molecular Weight (calculated)

30211.0 Da

IEP (calculated)

6.505

GRAVY (calculated)

-0.407

Length

270 amino acids

Sequence
(BLAST)

001: MATMSDHCWP EPIVPVQTLS NSGVPTVPQQ YIKPPSERPC GSITSMNCPD LSIPIIDLAC FSDIPEHRKA VMEAIGDACK NWGFFQVVNH GVSIDSVKRM
101: REAWREFFDL PMEEKKFYAN SPVTYEGYGS RLGVEKGATL DWSDYYYLNL LPNDMKNLEK WPEMPRHLRD VTEKYASELK NLSEVLLKAM SSTLGLDEDY
201: LHLAFGGSNG ISASLRVNYY PKCPEPELTL GLSSHSDPGG ISLLTKMSRG HRYAKGTHGS RCSQSRAPLL

Best Arabidopsis Sequence Match ( AT2G38240.1 )
(BLAST)

001: MATCWPEPIV SVQSLSQTGV PTVPNRYVKP AHQRPVFNTT QSDAGIEIPV LDMNDVWGKP EGLRLVRSAC EEWGFFQMVN HGVTHSLMER VRGAWREFFE
101: LPLEEKRKYA NSPDTYEGYG SRLGVVKDAK LDWSDYFFLN YLPSSIRNPS KWPSQPPKIR ELIEKYGEEV RKLCERLTET LSESLGLKPN KLMQALGGGD
201: KVGASLRTNF YPKCPQPQLT LGLSSHSDPG GITILLPDEK VAGLQVRRGD GWVTIKSVPN ALIVNIGDQL QILSNGIYKS VEHQVIVNSG MERVSLAFFY
301: NPRSDIPVGP IEELVTANRP ALYKPIRFDE YRSLIRQKGP CGKNQVDSLL LTR

Arabidopsis Description

ANSProbable 2-oxoglutarate-dependent dioxygenase ANS [Source:UniProtKB/Swiss-Prot;Acc:O80449]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.