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Sorghum
Subcellular Localization
min:
: max

 
Winner_takes_all: cytosol

Predictor Summary:
  • nucleus 1
  • peroxisome 1
  • cytosol 3
  • mitochondrion 1
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
Zm00001d001927_P001 Maize cytosol 88.78 87.16
HORVU2Hr1G117810.43 Barley cytosol, nucleus, peroxisome 78.5 77.54
Os04t0667200-01 Rice cytosol 77.88 76.69
TraesCS2D01G539400.1 Wheat cytosol, nucleus, peroxisome 76.95 75.3
TraesCS2A01G538600.1 Wheat cytosol 76.64 75.0
TraesCS2B01G568800.1 Wheat cytosol, nucleus, peroxisome 76.32 74.7
TraesCS2A01G487100.1 Wheat cytosol 60.44 70.29
HORVU2Hr1G108680.1 Barley cytosol 43.61 69.65
HORVU2Hr1G108800.1 Barley cytosol 43.61 69.65
TraesCS2D01G487400.1 Wheat cytosol, nucleus, peroxisome 40.5 69.52
TraesCS2B01G514200.1 Wheat cytosol, nucleus, peroxisome 69.47 68.2
VIT_16s0013g00730.t01 Wine grape cytosol 33.02 53.0
KXG27374 Sorghum plastid 53.89 51.95
VIT_16s0013g00740.t01 Wine grape cytosol, nucleus, peroxisome, plastid 47.66 43.1
AT5G07480.1 Thale cress cytosol 44.55 40.17
CDY65238 Canola cytosol, nucleus, peroxisome 44.24 39.34
CDX70044 Canola cytosol, nucleus, peroxisome 43.93 39.06
Bra028696.1-P Field mustard cytosol 42.99 38.23
Bra009258.1-P Field mustard cytosol, nucleus, peroxisome 28.66 33.33
EER94585 Sorghum cytosol 33.02 31.55
EER92960 Sorghum cytosol 32.71 31.25
EER96378 Sorghum cytosol 37.38 30.46
EES08336 Sorghum cytosol 36.14 29.29
KXG26978 Sorghum cytosol 30.53 28.57
EES07584 Sorghum cytosol 29.28 28.31
EER95911 Sorghum cytosol 28.97 27.76
EES12710 Sorghum cytosol, peroxisome, plastid 30.22 27.64
EES15170 Sorghum cytosol 35.2 27.43
EES00073 Sorghum cytosol 26.17 27.27
EES06032 Sorghum cytosol 28.66 26.21
KXG23558 Sorghum cytosol 27.73 26.02
EES13031 Sorghum cytosol 29.91 25.67
KXG23555 Sorghum cytosol 26.79 25.52
EES16044 Sorghum cytosol 26.79 25.52
EES01705 Sorghum cytosol 30.53 25.26
EER87904 Sorghum plastid 26.79 24.93
EES18946 Sorghum cytosol 28.35 24.86
EES15500 Sorghum cytosol 20.87 24.81
EES16047 Sorghum cytosol 25.86 24.34
EER92419 Sorghum cytosol 27.41 22.98
KXG27349 Sorghum plastid 29.59 22.04
OQU80974 Sorghum cytosol, mitochondrion, peroxisome, plastid 25.86 21.78
EES04312 Sorghum cytosol 23.05 18.55
Protein Annotations
Gene3D:2.60.120.330MapMan:50.1.13EntrezGene:8082569UniProt:C5YA08InterPro:DIOX_NProteinID:EES11613.1
GO:GO:0003674GO:GO:0003824GO:GO:0005488GO:GO:0008150GO:GO:0008152GO:GO:0016491
GO:GO:0046872GO:GO:0055114InterPro:IPNS-likeInterPro:IPR005123InterPro:IPR027443EnsemblPlants:OQU82532
ProteinID:OQU82532ProteinID:OQU82532.1InterPro:Oxoglu/Fe-dep_dioxygenasePFAM:PF03171PFAM:PF14226PFscan:PS51471
PANTHER:PTHR10209PANTHER:PTHR10209:SF201EnsemblPlantsGene:SORBI_3006G257400SUPFAM:SSF51197UniParc:UPI0001A8727CRefSeq:XP_002447285.1
SEG:seg:::::
Description
hypothetical protein
Coordinates
chr6:+:59380745..59384053
Molecular Weight (calculated)
36056.8 Da
IEP (calculated)
5.692
GRAVY (calculated)
-0.286
Length
321 amino acids
Sequence
(BLAST)
001: MSDLSMTVAQ EQLVHLSPTP VINLGHLNLD SVTRSGVIDE IAKACRDLGY FQVINHGISQ SVMDCAVEAA SDFFKLSSEA KEEFASEDLR QPVRYDTSSK
101: DSISMSRAFL KHYAHPLSDW IQYWPEKPTI YREYMGKYAV EVRSVALQLI EAILEGLGLG KEYLNEQFQE GSQLLSVNCY PKAPQDPVTI GLAPHSDYGF
201: LTILLTSCQG LEVVDRSSNS WKTVQQLPHA LHVHVGDHME VLSNGQIKTA MHRAVLNPEE SRISIASIQG FELHEKVACA KELVDKQNPA KYKESSFSDF
301: LDHLTANMDN KHRNFLESLR M
Best Arabidopsis Sequence Match ( AT5G07480.1 )
(BLAST)
001: MEKGEDSSTF KMGNSAQERS LPYVPDCYVV PPSSKPCDSN SGIVPTIDVS RLKGGDDERR GVIQELSLAC QHLGFFQIVN HGINQNILDD ALEVANSFFE
101: LPAKEKKQFM SNDVYAPVRY STSLKDGLDT IQFWRIFLKH YAHPLHRWIH LWPENPPGYR EKMGKFCEEV RKLSIELMGA ITESLGLGRD YLSSRMDENG
201: MQVMTVNCYP PCPDPETALG LPPHSDYSCI TLLLQNLDGL KIFDPMAHGG SGRWVGVPQV TGVLKVHIGD HVEVLSNGLY KSIVHKVTLN EEKTRISLAS
301: LHSLGMDDKM SVPRELVNDE NPVRYKESSF NDFLDFLVKN DISQGDRFID TLRIKD
Arabidopsis Description
KUOX1KAR-UP oxidoreductase 1 [Source:TAIR;Acc:AT5G07480]
SUBAcon: [cytosol]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.