CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: peroxisome, plastid, cytosol

Predictor Summary:

nucleus 1
plastid 3
peroxisome 1
cytosol 2

Predictors

GFP

MS/MS

Papers

PPI

Inferred distinct locusB in Crop

locusB	locations
EER91178
EES17386

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT4G10500.1	EER91178	AT2G34710.1	21798944
AT4G10500.1	EES17386	AT2G34710.1	21798944

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d002564_P001	Maize	cytosol, peroxisome, plastid	96.58	96.58
Os04t0581100-01	Rice	cytosol, peroxisome, plastid	90.31	90.06
TraesCS2A01G394900.1	Wheat	plastid	89.46	89.97
TraesCS2B01G412900.1	Wheat	plastid	89.17	89.68
HORVU2Hr1G093950.12	Barley	peroxisome, plastid	85.75	86.25
TraesCS2D01G392900.1	Wheat	plastid	89.46	80.51
VIT_15s0048g02430.t01	Wine grape	cytosol	62.68	63.95
VIT_02s0025g02960.t01	Wine grape	cytosol	60.4	60.92
VIT_02s0025g02970.t01	Wine grape	cytosol	60.11	60.63
KRH47765	Soybean	cytosol	59.54	60.58
GSMUA_AchrUn_...	Banana	mitochondrion, plastid	67.24	60.51
KRH06343	Soybean	cytosol	59.26	60.29
AT4G10500.1	Thale cress	plastid	58.4	58.74
AT4G10490.1	Thale cress	cytosol	56.98	57.47
Bra000712.1-P	Field mustard	cytosol, nucleus, peroxisome	57.27	57.27
CDX86858	Canola	cytosol	55.27	57.23
CDY05103	Canola	cytosol, nucleus, peroxisome	56.98	56.98
KRH68971	Soybean	cytosol	56.41	56.73
Bra037921.1-P	Field mustard	cytosol	56.41	56.41
CDX99548	Canola	cytosol	54.42	56.34
Bra000713.1-P	Field mustard	plastid	56.13	56.29
CDX90761	Canola	plastid	56.13	56.29
CDX99549	Canola	vacuole	33.62	55.4
EER94585	Sorghum	cytosol	52.99	55.36
CDX99550	Canola	cytosol	53.56	55.13
CDX90759	Canola	cytosol	46.72	54.3
KXG26978	Sorghum	cytosol	52.42	53.64
EER92960	Sorghum	cytosol	51.0	53.27
EER95911	Sorghum	cytosol	33.62	35.22
EES00073	Sorghum	cytosol	30.48	34.74
EES06032	Sorghum	cytosol	34.19	34.19
EES18946	Sorghum	cytosol	35.61	34.15
EER96378	Sorghum	cytosol	38.18	34.01
EES01705	Sorghum	cytosol	37.04	33.51
EES15170	Sorghum	cytosol	38.46	32.77
EES16044	Sorghum	cytosol	31.34	32.64
KXG23558	Sorghum	cytosol	31.62	32.46
KXG23555	Sorghum	cytosol	31.05	32.34
EES08336	Sorghum	cytosol	36.47	32.32
EES16047	Sorghum	cytosol	31.34	32.26
EES07584	Sorghum	cytosol	30.48	32.23
EER87904	Sorghum	plastid	31.62	32.17
EES13031	Sorghum	cytosol	34.19	32.09
KXG27374	Sorghum	plastid	30.2	31.83
EES15500	Sorghum	cytosol	24.22	31.48
EER92419	Sorghum	cytosol	33.33	30.55
OQU82532	Sorghum	cytosol	27.64	30.22
KXG27349	Sorghum	plastid	34.19	27.84
OQU80974	Sorghum	cytosol, mitochondrion, peroxisome, plastid	29.34	27.03
EES04312	Sorghum	cytosol	29.34	25.81

Protein Annotations

MapMan:11.8.3.4	Gene3D:2.60.120.330	EntrezGene:8060435	UniProt:C5YEI3	InterPro:DIOX_N	EnsemblPlants:EES12710
ProteinID:EES12710	ProteinID:EES12710.1	GO:GO:0003674	GO:GO:0003824	GO:GO:0005488	GO:GO:0008150
GO:GO:0008152	GO:GO:0016491	GO:GO:0046872	GO:GO:0055114	InterPro:IPNS-like	InterPro:IPR005123
InterPro:IPR027443	InterPro:Oxoglu/Fe-dep_dioxygenase	PFAM:PF03171	PFAM:PF14226	PFscan:PS51471	PANTHER:PTHR10209
PANTHER:PTHR10209:SF196	EnsemblPlantsGene:SORBI_3006G190100	SUPFAM:SSF51197	unigene:Sbi.1791	UniParc:UPI0001A8776A	RefSeq:XP_002448382.1
SEG:seg	:	:	:	:	:

Description

hypothetical protein

Coordinates

chr6:-:54424032..54426105

Molecular Weight (calculated)

39034.7 Da

IEP (calculated)

6.510

GRAVY (calculated)

-0.259

Length

351 amino acids

Sequence
(BLAST)

001: MAPAISKPLL SDLVAQIGKV PSSHIRPVGD RPDLANVDNE SGAGIPLIDL KMLNGPERRK VVEAIGRACE SDGFFMVTNH GIPAAVVEGM LRVAREFFHL
101: PESERLKCYS DDPKKAIRLS TSFNVRTEKV NNWRDFLRLH CYPLESFVDQ WPSNPPSFRQ VVGTYATEAR ALALRLLEAI SESLGLERSH MVRAMGRHAQ
201: HMAVNYYPPC PQPELTYGLP GHKDPNAITL LLQDGVSGLQ VQRGGRWVAV NPVPDALVIN IGDQMQALSN DRYKSVLHRV IVNSESERIS VPTFYCPSPD
301: GVIAPADALV DDAHPLAYRP FTYQEYYDEF WNMGLQSASC LDRFRPGGSI E

Best Arabidopsis Sequence Match ( AT4G10500.1 )
(BLAST)

001: MATSAISKLL VSDFASSVHI PSNYVRPISD RPNLSEVESS GDSIPLIDLR DLHGPNRAVI VQQLASACST YGFFQIKNHG VPDTTVNKMQ TVAREFFHQP
101: ESERVKHYSA DPTKTTRLST SFNVGADKVL NWRDFLRLHC FPIEDFIEEW PSSPISFREV TAEYATSVRA LVLRLLEAIS ESLGLESDHI SNILGKHAQH
201: MAFNYYPPCP EPELTYGLPG HKDPTVITVL LQDQVSGLQV FKDDKWVAVS PIPNTFIVNI GDQMQVISND KYKSVLHRAV VNTENERLSI PTFYFPSTDA
301: VIGPAHELVN EQDSLAIYRT YPFVEYWDKF WNRSLATASC LDAFKAPTT

Arabidopsis Description

DLO1Protein DMR6-LIKE OXYGENASE 1 [Source:UniProtKB/Swiss-Prot;Acc:Q9ZSA8]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.