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Barley
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Barley
Subcellular Localization
min:
: max

 
Winner_takes_all: peroxisome, plastid

Predictor Summary:
  • plastid 2
  • peroxisome 1
Predictors GFP MS/MS Papers
Winner Takes All:peroxisome, plastid
Any Predictor:peroxisome, plastid
iPSORT:plastid
MultiLoc:peroxisome
TargetP:plastid
PPI

Inferred distinct locusB in Crop

locusBlocations
HORVU0Hr1G010250.3
HORVU5Hr1G010650.1
HORVU5Hr1G093150.2

Inferred from Arabidopsis experimental PPI

Ath locusAlocusBAth locusBPaper
AT4G10500.1 HORVU0Hr1G010250.3 AT2G34710.1 21798944
AT4G10500.1 HORVU5Hr1G010650.1 AT2G34710.1 21798944
AT4G10500.1 HORVU5Hr1G093150.2 AT2G34710.1 21798944
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
TraesCS2A01G394900.1 Wheat plastid 93.98 93.98
TraesCS2B01G412900.1 Wheat plastid 93.12 93.12
Os04t0581100-01 Rice cytosol, peroxisome, plastid 86.82 86.08
EES12710 Sorghum cytosol, peroxisome, plastid 86.25 85.75
Zm00001d002564_P001 Maize cytosol, peroxisome, plastid 85.96 85.47
TraesCS2D01G392900.1 Wheat plastid 93.98 84.1
VIT_15s0048g02430.t01 Wine grape cytosol 61.6 62.5
KRH47765 Soybean cytosol 59.31 60.0
KRH06343 Soybean cytosol 59.31 60.0
VIT_02s0025g02970.t01 Wine grape cytosol 57.88 58.05
VIT_02s0025g02960.t01 Wine grape cytosol 57.59 57.76
GSMUA_AchrUn_... Banana mitochondrion, plastid 64.18 57.44
AT4G10500.1 Thale cress plastid 55.59 55.59
KRH68971 Soybean cytosol 55.01 55.01
Bra000712.1-P Field mustard cytosol, nucleus, peroxisome 55.3 54.99
CDY05103 Canola cytosol, nucleus, peroxisome 55.01 54.7
CDX90759 Canola cytosol 47.28 54.64
AT4G10490.1 Thale cress cytosol 54.44 54.6
CDX86858 Canola cytosol 52.44 53.98
CDX99548 Canola cytosol 52.44 53.98
Bra037921.1-P Field mustard cytosol 53.87 53.56
Bra000713.1-P Field mustard plastid 53.58 53.43
CDX90761 Canola plastid 53.58 53.43
CDX99550 Canola cytosol 51.58 52.79
CDX99549 Canola vacuole 31.52 51.64
HORVU4Hr1G084810.2 Barley cytosol, peroxisome, plastid 48.42 50.3
HORVU0Hr1G005300.1 Barley cytosol 49.0 50.29
HORVU6Hr1G010980.1 Barley cytosol 33.52 33.81
HORVU2Hr1G117900.3 Barley cytosol, mitochondrion, peroxisome 29.23 32.08
HORVU6Hr1G056710.2 Barley cytosol, peroxisome 6.59 31.94
HORVU4Hr1G089480.1 Barley cytosol 32.09 31.82
HORVU7Hr1G025650.1 Barley cytosol 31.52 31.7
HORVU7Hr1G060070.9 Barley cytosol, peroxisome 35.82 31.25
HORVU2Hr1G117810.43 Barley cytosol, nucleus, peroxisome 28.94 31.08
HORVU1Hr1G015050.7 Barley cytosol, peroxisome 32.09 30.85
HORVU7Hr1G122350.2 Barley cytosol, peroxisome, plastid 29.51 30.47
HORVU4Hr1G056500.2 Barley cytosol, peroxisome, plastid 32.38 30.46
HORVU2Hr1G108680.1 Barley cytosol 17.48 30.35
HORVU2Hr1G108800.1 Barley cytosol 17.48 30.35
HORVU3Hr1G087570.4 Barley cytosol, peroxisome, plastid 35.53 30.32
HORVU5Hr1G011540.3 Barley cytosol 33.24 30.29
HORVU7Hr1G033360.11 Barley cytosol 30.95 29.83
HORVU4Hr1G000050.3 Barley plastid 33.81 29.21
HORVU3Hr1G077080.2 Barley cytosol, peroxisome, plastid 29.51 28.69
HORVU1Hr1G071670.2 Barley cytosol 33.24 28.09
HORVU4Hr1G089330.2 Barley plastid 34.67 27.82
HORVU4Hr1G081480.3 Barley plasma membrane 26.36 26.9
HORVU5Hr1G094280.1 Barley cytosol, peroxisome 28.65 25.91
HORVU4Hr1G081550.2 Barley peroxisome, plastid 20.92 25.7
HORVU4Hr1G081490.1 Barley cytosol, peroxisome 26.36 25.7
HORVU2Hr1G110130.3 Barley mitochondrion 32.38 25.45
HORVU4Hr1G081500.1 Barley cytosol, peroxisome 15.76 25.35
HORVU6Hr1G080360.1 Barley plastid 25.21 25.14
HORVU5Hr1G048180.23 Barley cytosol, nucleus, peroxisome 27.22 24.55
Protein Annotations
EnsemblPlants:HORVU2Hr1G093950.12EnsemblPlantsGene:HORVU2Hr1G093950Gene3D:2.60.120.330GO:GO:0003674GO:GO:0003824GO:GO:0008150
GO:GO:0008152GO:GO:0016491GO:GO:0055114InterPro:DIOX_NInterPro:IPNS-likeInterPro:IPR005123
InterPro:IPR027443InterPro:Oxoglu/Fe-dep_dioxygenasePANTHER:PTHR10209PANTHER:PTHR10209:SF196PFAM:PF03171PFAM:PF14226
PFscan:PS51471SEG:segSUPFAM:SSF51197MapMan:11.8.3.4::
Description
No Description!
Coordinates
chrchr2H:+:661233226..661243995
Molecular Weight (calculated)
38067.4 Da
IEP (calculated)
6.646
GRAVY (calculated)
-0.230
Length
349 amino acids
Sequence
(BLAST)
001: MAPAIAAKPL LSDLVAQTRR VPSSHIRAVG DRPDLANVDH ESGAGIPLID LKHLDGPGRR RVVEAIGSAC ENDGFFMVTN HGIPEAVVDG MLRVAREFFH
101: LPESERLKCY SDDPKKAIRL STSFNVRTEK VSNWRDFLRL HCYPLESFID QWPSNPPAFR EAVGTYSTEA RALALRLLEA ISESLGLERG HMVKAMGRHA
201: QHMAVNYYPP CPQPELTYGL PGHXDVDAAV XXXXXGVSGL QVRRDGRWVA VNPVPGALVI NIGDQLQALS NDRYKSVLHR VIVNSESERI SVPTFYCPSP
301: DAVVAPAEAL VDGGHRLAYR PFTYQEYYEE FWNMGLEAAS CLDRFRPIA
Best Arabidopsis Sequence Match ( AT4G10500.1 )
(BLAST)
001: MATSAISKLL VSDFASSVHI PSNYVRPISD RPNLSEVESS GDSIPLIDLR DLHGPNRAVI VQQLASACST YGFFQIKNHG VPDTTVNKMQ TVAREFFHQP
101: ESERVKHYSA DPTKTTRLST SFNVGADKVL NWRDFLRLHC FPIEDFIEEW PSSPISFREV TAEYATSVRA LVLRLLEAIS ESLGLESDHI SNILGKHAQH
201: MAFNYYPPCP EPELTYGLPG HKDPTVITVL LQDQVSGLQV FKDDKWVAVS PIPNTFIVNI GDQMQVISND KYKSVLHRAV VNTENERLSI PTFYFPSTDA
301: VIGPAHELVN EQDSLAIYRT YPFVEYWDKF WNRSLATASC LDAFKAPTT
Arabidopsis Description
DLO1Protein DMR6-LIKE OXYGENASE 1 [Source:UniProtKB/Swiss-Prot;Acc:Q9ZSA8]
SUBAcon: [plastid]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.