Subcellular Localization
min:
: max
Winner_takes_all: plasma membrane
Predictor Summary:
Predictor Summary:
- peroxisome 1
- cytosol 1
| Predictors | GFP | MS/MS | Papers | ||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
|
plasma membrane:
29385242
|
msms PMID:
29385242
doi
Biosystems Engineering, Fraunhofer Institute for Factory Operation and Automation, Joseph-von-Fraunhofer-Straße 1, 39106, Magdeburg, Germany., Institute of Biology/Applied Genetics, Dahlem Centre of Plant Sciences, Free University of Berlin, Albrecht-Thaer-Weg 6, 14195, Berlin, Germany., Leibniz Institute of Plant Genetics and Crop Plant Research, Corrensstraße 3, 06466, Stadt Seeland, Gatersleben, Germany., Leibniz Institute of Vegetable and Ornamental Crops, Theodor-Echtermeyer-Weg 1, 14979, Großbeeren, Germany., Technical University of Denmark, Søltofts Plads, Building 224, 2800, Kongens Lyngby, Denmark.
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| HORVU4Hr1G081500.1 | Barley | cytosol, peroxisome | 62.28 | 98.16 |
| HORVU4Hr1G081490.1 | Barley | cytosol, peroxisome | 100.0 | 95.53 |
| HORVU4Hr1G081550.2 | Barley | peroxisome, plastid | 79.24 | 95.42 |
| Zm00001d035308_P001 | Maize | extracellular | 69.01 | 68.8 |
| KXG23558 | Sorghum | cytosol | 68.13 | 68.13 |
| HORVU7Hr1G033360.11 | Barley | cytosol | 62.87 | 59.39 |
| HORVU7Hr1G122350.2 | Barley | cytosol, peroxisome, plastid | 54.09 | 54.73 |
| HORVU4Hr1G089480.1 | Barley | cytosol | 40.94 | 39.77 |
| VIT_07s0005g03150.t01 | Wine grape | cytosol, peroxisome, plastid | 37.72 | 37.83 |
| HORVU6Hr1G010980.1 | Barley | cytosol | 38.01 | 37.57 |
| HORVU1Hr1G071670.2 | Barley | cytosol | 44.74 | 37.05 |
| KRH32174 | Soybean | cytosol | 36.55 | 36.66 |
| KRG93692 | Soybean | cytosol, nucleus, peroxisome | 35.09 | 35.61 |
| KRH01377 | Soybean | cytosol, plastid | 34.8 | 35.21 |
| PGSC0003DMT400030676 | Potato | mitochondrion | 34.8 | 34.9 |
| KRH18340 | Soybean | cytosol | 34.21 | 34.72 |
| PGSC0003DMT400051681 | Potato | cytosol | 34.21 | 34.72 |
| Solyc06g083910.2.1 | Tomato | cytosol | 34.21 | 34.72 |
| Solyc07g043420.2.1 | Tomato | cytosol | 34.5 | 34.5 |
| Solyc09g066320.1.1 | Tomato | cytosol, nucleus, peroxisome | 30.99 | 34.42 |
| PGSC0003DMT400054579 | Potato | cytosol | 34.21 | 34.31 |
| PGSC0003DMT400025150 | Potato | cytosol | 32.75 | 34.04 |
| Solyc09g066310.2.1 | Tomato | cytosol | 32.46 | 33.74 |
| Solyc02g070080.2.1 | Tomato | cytosol | 33.63 | 33.33 |
| HORVU4Hr1G084810.2 | Barley | cytosol, peroxisome, plastid | 32.46 | 33.04 |
| Solyc11g010410.1.1 | Tomato | cytosol | 32.46 | 33.04 |
| PGSC0003DMT400025139 | Potato | cytosol | 32.16 | 32.93 |
| Solyc10g018190.1.1 | Tomato | cytosol | 30.99 | 32.42 |
| HORVU0Hr1G005300.1 | Barley | cytosol | 32.16 | 32.35 |
| PGSC0003DMT400041798 | Potato | cytosol | 30.99 | 31.55 |
| PGSC0003DMT400025148 | Potato | cytosol | 25.44 | 31.3 |
| Solyc11g010400.1.1 | Tomato | cytosol | 30.7 | 31.25 |
| PGSC0003DMT400070444 | Potato | cytosol, peroxisome, plastid | 31.87 | 30.97 |
| Solyc11g072200.1.1 | Tomato | cytosol, peroxisome, plastid | 31.87 | 30.97 |
| Solyc10g018170.1.1 | Tomato | cytosol | 18.71 | 30.05 |
| Solyc06g073580.2.1 | Tomato | cytosol | 30.7 | 29.75 |
| HORVU2Hr1G108800.1 | Barley | cytosol | 16.96 | 28.86 |
| HORVU2Hr1G108680.1 | Barley | cytosol | 16.96 | 28.86 |
| HORVU2Hr1G117810.43 | Barley | cytosol, nucleus, peroxisome | 27.19 | 28.62 |
| HORVU7Hr1G025650.1 | Barley | cytosol | 28.95 | 28.53 |
| HORVU7Hr1G060070.9 | Barley | cytosol, peroxisome | 33.04 | 28.25 |
| HORVU6Hr1G056710.2 | Barley | cytosol, peroxisome | 5.85 | 27.78 |
| HORVU2Hr1G117900.3 | Barley | cytosol, mitochondrion, peroxisome | 25.73 | 27.67 |
| KRH45093 | Soybean | cytosol, mitochondrion, nucleus, peroxisome | 26.32 | 27.52 |
| HORVU4Hr1G000050.3 | Barley | plastid | 31.29 | 26.49 |
| HORVU2Hr1G093950.12 | Barley | peroxisome, plastid | 26.9 | 26.36 |
| HORVU4Hr1G056500.2 | Barley | cytosol, peroxisome, plastid | 27.78 | 25.61 |
| HORVU1Hr1G015050.7 | Barley | cytosol, peroxisome | 26.9 | 25.34 |
| HORVU5Hr1G011540.3 | Barley | cytosol | 26.61 | 23.76 |
| HORVU3Hr1G087570.4 | Barley | cytosol, peroxisome, plastid | 27.19 | 22.74 |
| HORVU3Hr1G077080.2 | Barley | cytosol, peroxisome, plastid | 23.39 | 22.28 |
| HORVU5Hr1G094280.1 | Barley | cytosol, peroxisome | 24.27 | 21.5 |
| HORVU6Hr1G080360.1 | Barley | plastid | 21.93 | 21.43 |
| HORVU2Hr1G110130.3 | Barley | mitochondrion | 27.19 | 20.95 |
| HORVU5Hr1G048180.23 | Barley | cytosol, nucleus, peroxisome | 22.22 | 19.64 |
| HORVU4Hr1G089330.2 | Barley | plastid | 22.51 | 17.7 |
Protein Annotations
| Gene3D:2.60.120.330 | MapMan:25.4.3.1.4 | UniProt:A0A287PUN5 | InterPro:DIOX_N | GO:GO:0003674 | GO:GO:0003824 |
| GO:GO:0005488 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0016491 | GO:GO:0046872 | GO:GO:0055114 |
| EnsemblPlantsGene:HORVU4Hr1G081480 | EnsemblPlants:HORVU4Hr1G081480.3 | InterPro:IPNS-like | InterPro:IPR005123 | InterPro:IPR027443 | InterPro:Oxoglu/Fe-dep_dioxygenase |
| PFAM:PF03171 | PFAM:PF14226 | PFscan:PS51471 | PANTHER:PTHR10209 | PANTHER:PTHR10209:SF220 | SUPFAM:SSF51197 |
| UniParc:UPI000B46FE4B | : | : | : | : | : |
Description
No Description!
Coordinates
chrchr4H:-:619459117..619461396
Molecular Weight (calculated)
38097.7 Da
IEP (calculated)
6.106
GRAVY (calculated)
-0.240
Length
342 amino acids
Sequence
(BLAST)
(BLAST)
001: DFTMENILHA TPAHVSLPES FVFASDKVPP ATKAVVSLPI IDLSCGRDEV RRSILEAGKE LGFFQVVNHG VSKQVMRDME GMCEQFFHLP AADKASLYSE
101: ERHKPNRLFS GATYDTGGEK YWRDCLRLAC PFPVDDSINE WPDTPKGLRD VIEKFTSQTR DVGKELLRLL CEGMGIQADY FEGDLSGGNV ILNINHYPSC
201: PNPDKALGQP PHCDRNLITL LLPGAVNGLE VSYKGDWIKV DPAPNAFVVN FGQQLEVVTN GLLKSIEHRA MTNSALARTS VATFIMPTQE CLIGPAKEFL
301: SKENPPCYRT TMFRDFMRIY NVVKLGSSLN LTTNLKNVQK EI
101: ERHKPNRLFS GATYDTGGEK YWRDCLRLAC PFPVDDSINE WPDTPKGLRD VIEKFTSQTR DVGKELLRLL CEGMGIQADY FEGDLSGGNV ILNINHYPSC
201: PNPDKALGQP PHCDRNLITL LLPGAVNGLE VSYKGDWIKV DPAPNAFVVN FGQQLEVVTN GLLKSIEHRA MTNSALARTS VATFIMPTQE CLIGPAKEFL
301: SKENPPCYRT TMFRDFMRIY NVVKLGSSLN LTTNLKNVQK EI
001: MSPSMIAPVM EEENKKYQKG VKHLCENGLT KVPTKYIWPE PDRPILTKSD KLIKPNKNLK LPLIDFAELL GPNRPHVLRT IAEACKTYGF FQVVNHGMEG
101: DVSKNMIDVC KRFFELPYEE RSKYMSSDMS APVRYGTSFN QIKDNVFCWR DFLKLYAHPL PDYLPHWPSS PSDFRSSAAT YAKETKEMFE MMVKAILESL
201: EIDGSDEAAK ELEEGSQVVV VNCYPPCPEP ELTLGMPPHS DYGFLTLLLQ DEVEGLQILY RDEWVTVDPI PGSFVVNVGD HLEIFSNGRY KSVLHRVLVN
301: STKPRISVAS LHSFPLTSVV KPSPKLVDKH NPSQYMDTDF TTFLQYITSR EPKWKNFLES RKIHHV
101: DVSKNMIDVC KRFFELPYEE RSKYMSSDMS APVRYGTSFN QIKDNVFCWR DFLKLYAHPL PDYLPHWPSS PSDFRSSAAT YAKETKEMFE MMVKAILESL
201: EIDGSDEAAK ELEEGSQVVV VNCYPPCPEP ELTLGMPPHS DYGFLTLLLQ DEVEGLQILY RDEWVTVDPI PGSFVVNVGD HLEIFSNGRY KSVLHRVLVN
301: STKPRISVAS LHSFPLTSVV KPSPKLVDKH NPSQYMDTDF TTFLQYITSR EPKWKNFLES RKIHHV
Arabidopsis Description
2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein [Source:UniProtKB/TrEMBL;Acc:F4INZ9]
SUBAcon: [peroxisome,nucleus,cytosol]
SUBAcon: [peroxisome,nucleus,cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.