Factsheet for PGSC0003DMT400051681

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 4
plastid 1
peroxisome 2
mitochondrion 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Solyc06g083910.2.1	Tomato	cytosol	95.85	95.85
PGSC0003DMT400054579	Potato	cytosol	86.94	85.92
VIT_07s0005g03150.t01	Wine grape	cytosol, peroxisome, plastid	54.3	53.67
KRH32174	Soybean	cytosol	52.52	51.91
PGSC0003DMT400025139	Potato	cytosol	48.07	48.5
PGSC0003DMT400041798	Potato	cytosol	46.88	47.02
KRG93692	Soybean	cytosol, nucleus, peroxisome	46.59	46.59
KRH18340	Soybean	cytosol	46.59	46.59
KRH01377	Soybean	cytosol, plastid	45.99	45.86
PGSC0003DMT400070444	Potato	cytosol, peroxisome, plastid	45.99	44.03
PGSC0003DMT400025150	Potato	cytosol	42.14	43.16
PGSC0003DMT400001570	Potato	cytosol	41.84	41.84
PGSC0003DMT400030676	Potato	mitochondrion	42.14	41.64
PGSC0003DMT400025148	Potato	cytosol	33.23	40.29
TraesCS7D01G160100.2	Wheat	plastid	39.76	40.24
TraesCS7A01G159200.1	Wheat	plastid	39.17	39.64
TraesCS7B01G063700.1	Wheat	plastid	39.17	39.52
PGSC0003DMT400069218	Potato	cytosol	39.17	38.6
EER95911	Sorghum	cytosol	37.98	38.21
TraesCS1B01G052600.1	Wheat	cytosol	38.87	37.86
Os07t0169600-01	Rice	plastid	37.69	37.35
Zm00001d035308_P001	Maize	extracellular	37.69	37.03
HORVU7Hr1G033360.11	Barley	cytosol	39.76	37.02
TraesCS7A01G037700.1	Wheat	cytosol	30.27	36.96
HORVU4Hr1G089480.1	Barley	cytosol	38.58	36.93
KXG23558	Sorghum	cytosol	37.39	36.84
TraesCS6B01G044600.1	Wheat	cytosol	37.98	36.78
TraesCS6D01G035200.1	Wheat	cytosol	37.69	36.49
TraesCS6D01G038900.1	Wheat	cytosol	34.72	36.45
KRH45093	Soybean	cytosol, mitochondrion, nucleus, peroxisome	35.31	36.39
TraesCS3B01G444500.1	Wheat	cytosol	36.8	36.15
TraesCS1A01G008400.1	Wheat	mitochondrion	34.72	35.89
TraesCS6A01G031500.1	Wheat	cytosol	26.71	35.43
TraesCS6D01G270600.1	Wheat	plastid	35.61	35.29
TraesCS6B01G046800.1	Wheat	plastid	36.2	35.26
TraesCS3D01G405500.1	Wheat	cytosol	36.5	35.24
Zm00001d020163_P001	Maize	cytosol	27.89	35.21
TraesCS6B01G318000.1	Wheat	plastid	35.31	35.0
TraesCS6A01G033300.1	Wheat	plastid	35.91	34.97
TraesCS3B01G486500.1	Wheat	cytosol	36.2	34.96
TraesCS3B01G479500.1	Wheat	cytosol	35.91	34.77
KXG23555	Sorghum	cytosol	34.72	34.72
EES16044	Sorghum	cytosol	34.72	34.72
PGSC0003DMT400036565	Potato	cytosol	36.2	34.66
EES16047	Sorghum	cytosol	35.01	34.6
HORVU4Hr1G081500.1	Barley	cytosol, peroxisome	22.26	34.56
TraesCS6B01G317900.1	Wheat	cytosol	27.6	34.44
PGSC0003DMT400049193	Potato	cytosol, mitochondrion, peroxisome	18.69	34.43
TraesCS6A01G055700.1	Wheat	cytosol	35.31	34.39
TraesCS6D01G038500.1	Wheat	plastid	35.31	34.39
TraesCS6B01G048100.1	Wheat	plastid	33.83	34.23
HORVU4Hr1G081480.3	Barley	plasma membrane	34.72	34.21
TraesCS3D01G437500.2	Wheat	cytosol	35.31	34.2
HORVU6Hr1G010980.1	Barley	cytosol	35.01	34.1
HORVU7Hr1G122350.2	Barley	cytosol, peroxisome, plastid	34.12	34.02
TraesCS3A01G445000.1	Wheat	cytosol	35.31	34.0
PGSC0003DMT400013913	Potato	cytoskeleton, cytosol, peroxisome	26.41	33.97
TraesCS6B01G318100.1	Wheat	plastid	34.12	33.53
HORVU4Hr1G081550.2	Barley	peroxisome, plastid	28.19	33.45
TraesCS6D01G270500.1	Wheat	plastid	33.83	33.24
TraesCS6D01G270700.1	Wheat	cytosol, peroxisome, plastid	33.53	33.24
TraesCS6A01G288300.1	Wheat	plastid	33.53	33.24
Zm00001d051896_P001	Maize	cytosol	34.42	33.14
TraesCS3D01G411700.1	Wheat	cytosol	29.67	33.11
PGSC0003DMT400083733	Potato	cytosol	35.31	33.06
EES06032	Sorghum	cytosol	34.42	33.05
PGSC0003DMT400013920	Potato	cytoskeleton, cytosol, peroxisome	25.82	32.95
Zm00001d041726_P001	Maize	plastid	33.83	32.95
HORVU4Hr1G081490.1	Barley	cytosol, peroxisome	34.72	32.68
PGSC0003DMT400070302	Potato	cytosol	35.61	32.52
PGSC0003DMT400031149	Potato	cytosol	34.12	32.3
TraesCS6A01G288400.1	Wheat	cytosol	33.83	31.93
PGSC0003DMT400067044	Potato	cytosol	31.75	31.85
PGSC0003DMT400009900	Potato	cytosol	35.91	31.68
PGSC0003DMT400013924	Potato	cytosol	10.98	31.36
TraesCS6B01G047100.1	Wheat	extracellular, vacuole	32.34	31.32
TraesCS7A01G026100.1	Wheat	cytosol	29.08	31.31
PGSC0003DMT400067586	Potato	cytosol, peroxisome, plastid	32.64	31.16
TraesCS6A01G034100.1	Wheat	cytosol, peroxisome, plastid	28.49	30.97
PGSC0003DMT400049192	Potato	cytosol	33.23	30.6
TraesCS6A01G030500.1	Wheat	plastid	26.71	30.41
HORVU1Hr1G071670.2	Barley	cytosol	37.09	30.27
PGSC0003DMT400009175	Potato	cytosol	32.05	30.0
PGSC0003DMT400028828	Potato	cytosol	31.16	29.17
PGSC0003DMT400092726	Potato	cytosol, peroxisome, plastid	29.38	28.21
PGSC0003DMT400083728	Potato	cytosol	13.35	26.95
PGSC0003DMT400088016	Potato	cytosol	25.82	26.69
TraesCS6D01G000600.1	Wheat	mitochondrion	18.1	23.92
PGSC0003DMT400029386	Potato	cytosol, nucleus, peroxisome	25.82	23.2
PGSC0003DMT400058554	Potato	cytosol	28.19	20.88

Protein Annotations

EntrezGene:102586726	Gene3D:2.60.120.330	MapMan:50.1.13	InterPro:DIOX_N	GO:GO:0003674	GO:GO:0003824
GO:GO:0005488	GO:GO:0008150	GO:GO:0008152	GO:GO:0016491	GO:GO:0046872	GO:GO:0055114
InterPro:IPNS-like	InterPro:IPR005123	InterPro:IPR027443	UniProt:M1BS17	InterPro:Oxoglu/Fe-dep_dioxygenase	PFAM:PF03171
PFAM:PF14226	EnsemblPlantsGene:PGSC0003DMG400020070	PGSC:PGSC0003DMG400020070	EnsemblPlants:PGSC0003DMT400051681	PFscan:PS51471	PANTHER:PTHR10209
PANTHER:PTHR10209:SF124	SUPFAM:SSF51197	UniParc:UPI000296AF61	RefSeq:XP_006352743.1	:	:

Description

1-aminocyclopropane-1-carboxylate oxidase [Source:PGSC_GENE;Acc:PGSC0003DMG400020070]

Coordinates

chr6:-:58772076..58773812

Molecular Weight (calculated)

38443.9 Da

IEP (calculated)

6.559

GRAVY (calculated)

-0.313

Length

337 amino acids

Sequence
(BLAST)

001: MENNLVSSWC KNVKTLPESY IFPEDQRPGE PIVPLSGSSP IIDLTIHEHD QAQQIIKASQ DFGYFQVINH GISETLLEET VDVLKEFFNM PAKEKAKYYS
101: VDPNSKCKLY TSTINYSNED KHYWRDALAH HCHPLQHYLP FWPEKPTRYR EVISAYSIET RKLITKISDV ISEGLGLEKG YFGGELSKVQ MLLVNYYPPC
201: PDPNLALGMH SHCDPNLFTI LLQDNVHGLQ IFKDGKWIAV EPIPNAFVVI IGCQLQIISN NKLKSVIHRA VTNSKETRIC VGNFVIPSSD CHIEPASDLV
301: KNTTNIPAYK PYQYKEFLHT YAINHGDFEA VLQSYKL

Best Arabidopsis Sequence Match ( AT4G10500.1 )
(BLAST)

001: MATSAISKLL VSDFASSVHI PSNYVRPISD RPNLSEVESS GDSIPLIDLR DLHGPNRAVI VQQLASACST YGFFQIKNHG VPDTTVNKMQ TVAREFFHQP
101: ESERVKHYSA DPTKTTRLST SFNVGADKVL NWRDFLRLHC FPIEDFIEEW PSSPISFREV TAEYATSVRA LVLRLLEAIS ESLGLESDHI SNILGKHAQH
201: MAFNYYPPCP EPELTYGLPG HKDPTVITVL LQDQVSGLQV FKDDKWVAVS PIPNTFIVNI GDQMQVISND KYKSVLHRAV VNTENERLSI PTFYFPSTDA
301: VIGPAHELVN EQDSLAIYRT YPFVEYWDKF WNRSLATASC LDAFKAPTT

Arabidopsis Description

DLO1Protein DMR6-LIKE OXYGENASE 1 [Source:UniProtKB/Swiss-Prot;Acc:Q9ZSA8]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.