Factsheet for PGSC0003DMT400049192

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 5
plastid 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, plastid
BaCelLo:	cytosol
EpiLoc:	plastid
MultiLoc:	cytosol
Plant-mPloc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Solyc10g076660.1.1	Tomato	cytosol	95.08	95.34
PGSC0003DMT400049193	Potato	cytosol, mitochondrion, peroxisome	45.63	91.26
KRH38051	Soybean	cytosol, peroxisome	40.16	75.77
PGSC0003DMT400028828	Potato	cytosol	72.95	74.17
VIT_08s0105g00380.t01	Wine grape	cytosol	64.21	65.64
KRH65721	Soybean	cytosol	65.3	64.08
KRH00254	Soybean	plastid	60.38	63.51
KRH49391	Soybean	cytosol	65.3	62.57
PGSC0003DMT400031149	Potato	cytosol	60.66	62.36
GSMUA_Achr6P15610_001	Banana	cytosol	58.47	60.8
AT2G38240.1	Thale cress	plastid	58.2	60.34
Bra017132.1-P	Field mustard	plastid	57.38	59.32
CDY18399	Canola	plastid	57.38	59.32
Bra000045.1-P	Field mustard	plastid	56.83	58.92
GSMUA_Achr7P15540_001	Banana	cytosol	56.83	58.76
CDY68873	Canola	plastid	56.56	58.64
CDY07746	Canola	plastid	56.56	58.64
CDX93319	Canola	plastid	56.56	58.64
CDY14476	Canola	plastid	56.28	58.36
TraesCS1B01G088600.1	Wheat	cytoskeleton, cytosol, peroxisome	55.46	56.7
TraesCS1D01G072700.1	Wheat	cytoskeleton, cytosol, peroxisome	54.92	56.15
TraesCS1A01G070200.1	Wheat	cytoskeleton, cytosol, peroxisome	54.64	55.87
EES18946	Sorghum	cytosol	55.74	55.74
TraesCS4B01G195000.1	Wheat	cytosol	55.46	55.16
TraesCS4A01G109200.1	Wheat	cytosol	55.19	54.89
HORVU1Hr1G015050.7	Barley	cytosol, peroxisome	54.37	54.82
TraesCS3B01G383900.1	Wheat	cytosol	55.74	54.69
HORVU4Hr1G056500.2	Barley	cytosol, peroxisome, plastid	55.19	54.45
Os01t0832600-01	Rice	cytosol	54.37	54.37
TraesCS3A01G351400.2	Wheat	cytosol	56.28	54.35
TraesCS4D01G195700.1	Wheat	cytosol	54.64	54.35
TraesCS3D01G345600.1	Wheat	cytosol	56.01	54.23
Zm00001d035462_P001	Maize	cytosol	55.46	53.14
Zm00001d042980_P002	Maize	cytosol	54.1	52.94
Os05t0127500-01	Rice	cytosol	53.01	52.72
Zm00001d028744_P001	Maize	cytosol	54.1	52.66
EES01705	Sorghum	cytosol	55.19	52.06
EER92419	Sorghum	cytosol	53.01	50.65
Os03t0289800-01	Rice	cytosol	53.55	50.65
HORVU3Hr1G087570.4	Barley	cytosol, peroxisome, plastid	55.74	49.88
TraesCS4B01G328300.1	Wheat	cytosol	36.34	49.63
Zm00001d047744_P001	Maize	mitochondrion	53.83	48.4
Zm00001d012456_P004	Maize	plastid	55.46	43.01
PGSC0003DMT400001570	Potato	cytosol	33.06	35.91
PGSC0003DMT400013924	Potato	cytosol	11.48	35.59
PGSC0003DMT400069218	Potato	cytosol	33.06	35.38
PGSC0003DMT400013913	Potato	cytoskeleton, cytosol, peroxisome	25.14	35.11
PGSC0003DMT400013920	Potato	cytoskeleton, cytosol, peroxisome	25.14	34.85
PGSC0003DMT400067044	Potato	cytosol	31.42	34.23
PGSC0003DMT400067586	Potato	cytosol, peroxisome, plastid	32.51	33.71
PGSC0003DMT400009900	Potato	cytosol	34.97	33.51
PGSC0003DMT400054579	Potato	cytosol	31.15	33.43
PGSC0003DMT400070302	Potato	cytosol	33.61	33.33
PGSC0003DMT400009175	Potato	cytosol	32.79	33.33
PGSC0003DMT400036565	Potato	cytosol	31.97	33.24
PGSC0003DMT400051681	Potato	cytosol	30.6	33.23
PGSC0003DMT400083733	Potato	cytosol	32.24	32.78
PGSC0003DMT400092726	Potato	cytosol, peroxisome, plastid	31.15	32.48
PGSC0003DMT400030676	Potato	mitochondrion	29.51	31.67
PGSC0003DMT400041798	Potato	cytosol	28.96	31.55
PGSC0003DMT400088016	Potato	cytosol	27.05	30.37
PGSC0003DMT400025139	Potato	cytosol	27.6	30.24
PGSC0003DMT400025148	Potato	cytosol	22.68	29.86
PGSC0003DMT400025150	Potato	cytosol	26.78	29.79
PGSC0003DMT400029386	Potato	cytosol, nucleus, peroxisome	30.33	29.6
PGSC0003DMT400058554	Potato	cytosol	36.07	29.01
PGSC0003DMT400070444	Potato	cytosol, peroxisome, plastid	26.5	27.56
PGSC0003DMT400083728	Potato	cytosol	11.48	25.15

Protein Annotations

EntrezGene:102582752	Gene3D:2.60.120.330	MapMan:50.1.13	InterPro:DIOX_N	GO:GO:0003674	GO:GO:0003824
GO:GO:0005488	GO:GO:0008150	GO:GO:0008152	GO:GO:0016491	GO:GO:0046872	GO:GO:0055114
InterPro:IPNS-like	InterPro:IPR005123	InterPro:IPR027443	UniProt:M1BND4	InterPro:Oxoglu/Fe-dep_dioxygenase	PFAM:PF03171
PFAM:PF14226	EnsemblPlantsGene:PGSC0003DMG400019119	PGSC:PGSC0003DMG400019119	EnsemblPlants:PGSC0003DMT400049192	PRINTS:PR00682	PFscan:PS51471
PANTHER:PTHR10209	PANTHER:PTHR10209:SF134	SUPFAM:SSF51197	UniParc:UPI000294CBC1	RefSeq:XP_006349452.1	:

Description

Oxidoreductase [Source:PGSC_GENE;Acc:PGSC0003DMG400019119]

Coordinates

chr10:+:50170880..50174359

Molecular Weight (calculated)

41402.4 Da

IEP (calculated)

6.713

GRAVY (calculated)

-0.407

Length

366 amino acids

Sequence
(BLAST)

001: MSNCLQSWPE PIVRVQGLSE SGIREIPDRY VKRPADRPCF KETTTLSSSS HVLDNIPLIN LENLKSLDES IRDETIELIS KACREWGFFQ VVNHGVSHEL
101: MANARGVWQE FFHLPPEEKQ KFANSPVTYE GYGSRLGVEK GGKLDWSDYF FLHYLPEPLR DDKKWPSLPI TCRKIIAEYG QEVVKLCRKI TNILSINLGL
201: NENYLHTKFG GDNERGACLR VNFYPKCPQP DLTLGLSSHS DPGGMTLLLP DTDVPGLQVR RGDDWITVKP VPNAFIVNIG DQIQVLSNAI YKSIEHRVIV
301: NSGKERVSLA FFYNPGGDIL IKPADELVTE DQPALYLPTT FNEYRAFIRT NGPRGKSQVE SLKSPR

Best Arabidopsis Sequence Match ( AT5G05600.1 )
(BLAST)

001: MNKNKIDVKI ETKKGSMDEW PEPIVRVQSL AESNLSSLPD RYIKPASLRP TTTEDAPTAT NIPIIDLEGL FSEEGLSDDV IMARISEACR GWGFFQVVNH
101: GVKPELMDAA RENWREFFHM PVNAKETYSN SPRTYEGYGS RLGVEKGASL DWSDYYFLHL LPHHLKDFNK WPSFPPTIRE VIDEYGEELV KLSGRIMRVL
201: STNLGLKEDK FQEAFGGENI GACLRVNYYP KCPRPELALG LSPHSDPGGM TILLPDDQVF GLQVRKDDTW ITVKPHPHAF IVNIGDQIQI LSNSTYKSVE
301: HRVIVNSDKE RVSLAFFYNP KSDIPIQPLQ ELVSTHNPPL YPPMTFDQYR LFIRTQGPQG KSHVESHISP R

Arabidopsis Description

Probable 2-oxoglutarate-dependent dioxygenase At5g05600 [Source:UniProtKB/Swiss-Prot;Acc:Q9FFF6]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.