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Potato
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Potato
Subcellular Localization
min:
: max

 
Winner_takes_all: cytosol

Predictor Summary:
  • nucleus 1
  • peroxisome 1
  • cytosol 3
  • mitochondrion 1
Predictors GFP MS/MS Papers
Winner Takes All:cytosol
Any Predictor:cytosol, mitochondrion, nucleus, peroxisome
BaCelLo:nucleus
MultiLoc:peroxisome
Plant-mPloc:cytosol
PProwler:mitochondrion
WoLF PSORT:cytosol
YLoc:cytosol
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
Solyc03g080190.2.1 Tomato cytosol, peroxisome, plastid 95.85 95.85
PGSC0003DMT400069218 Potato cytosol 79.82 78.66
VIT_13s0047g00210.t01 Wine grape cytosol 76.26 76.26
KRH64291 Soybean cytosol 76.26 76.04
KRH53636 Soybean cytosol 75.37 75.15
GSMUA_Achr8P12320_001 Banana cytosol, nucleus, peroxisome 67.95 67.16
EER92960 Sorghum cytosol 66.77 66.96
TraesCS4D01G341800.1 Wheat cytosol 66.47 66.67
GSMUA_Achr2P10240_001 Banana cytosol, nucleus, peroxisome 66.77 66.37
AT5G24530.1 Thale cress mitochondrion 67.06 66.28
GSMUA_Achr1P03620_001 Banana cytosol, nucleus, peroxisome 66.17 66.17
Os03t0122300-01 Rice cytosol 67.06 66.08
TraesCS4B01G346900.1 Wheat cytosol 65.88 66.07
CDX88109 Canola mitochondrion 66.77 65.98
CDX80450 Canola mitochondrion 66.47 65.69
Os04t0581000-01 Rice cytosol 65.88 65.29
GSMUA_Achr4P30130_001 Banana cytosol, nucleus, peroxisome 65.28 65.28
GSMUA_Achr11P... Banana cytosol, nucleus, peroxisome 67.95 64.87
HORVU4Hr1G084810.2 Barley cytosol, peroxisome, plastid 64.39 64.58
CDY05412 Canola mitochondrion 64.99 64.22
TraesCS2A01G395000.1 Wheat cytosol 64.69 64.12
TraesCS2D01G392800.1 Wheat cytosol 64.69 64.12
EER94585 Sorghum cytosol 63.8 63.99
Bra029414.1-P Field mustard plastid 64.69 63.93
CDY05445 Canola plastid 64.69 63.93
KXG26978 Sorghum cytosol 64.69 63.56
GSMUA_Achr5P10230_001 Banana cytosol, nucleus, peroxisome 63.5 63.5
HORVU0Hr1G005300.1 Barley cytosol 63.8 63.24
TraesCS2B01G413000.1 Wheat cytosol, nucleus, peroxisome 63.2 62.65
GSMUA_Achr1P00770_001 Banana cytosol 62.61 62.61
GSMUA_Achr5P12830_001 Banana cytosol 62.61 62.24
Zm00001d029744_P001 Maize cytosol 60.83 61.01
Zm00001d027423_P002 Maize cytosol, nucleus, peroxisome 65.58 59.89
TraesCS5A01G515600.2 Wheat cytosol 65.88 57.81
Bra009771.1-P Field mustard mitochondrion 63.8 51.44
PGSC0003DMT400051681 Potato cytosol 41.84 41.84
PGSC0003DMT400054579 Potato cytosol 40.36 39.88
PGSC0003DMT400049193 Potato cytosol, mitochondrion, peroxisome 20.47 37.7
PGSC0003DMT400013913 Potato cytoskeleton, cytosol, peroxisome 29.08 37.4
PGSC0003DMT400009900 Potato cytosol 41.54 36.65
PGSC0003DMT400013920 Potato cytoskeleton, cytosol, peroxisome 28.49 36.36
PGSC0003DMT400067044 Potato cytosol 35.91 36.01
PGSC0003DMT400025150 Potato cytosol 35.01 35.87
PGSC0003DMT400070302 Potato cytosol 38.87 35.5
PGSC0003DMT400030676 Potato mitochondrion 35.61 35.19
PGSC0003DMT400025148 Potato cytosol 28.78 34.89
HORVU4Hr1G089330.2 Barley plastid 44.51 34.48
PGSC0003DMT400031149 Potato cytosol 36.2 34.27
PGSC0003DMT400009175 Potato cytosol 36.2 33.89
PGSC0003DMT400036565 Potato cytosol 35.31 33.81
PGSC0003DMT400025139 Potato cytosol 33.23 33.53
PGSC0003DMT400067586 Potato cytosol, peroxisome, plastid 35.01 33.43
PGSC0003DMT400083733 Potato cytosol 35.61 33.33
PGSC0003DMT400049192 Potato cytosol 35.91 33.06
PGSC0003DMT400028828 Potato cytosol 35.31 33.06
PGSC0003DMT400041798 Potato cytosol 32.94 33.04
PGSC0003DMT400092726 Potato cytosol, peroxisome, plastid 33.83 32.48
PGSC0003DMT400013924 Potato cytosol 11.28 32.2
PGSC0003DMT400070444 Potato cytosol, peroxisome, plastid 32.34 30.97
PGSC0003DMT400088016 Potato cytosol 28.78 29.75
PGSC0003DMT400083728 Potato cytosol 13.65 27.54
PGSC0003DMT400029386 Potato cytosol, nucleus, peroxisome 27.89 25.07
PGSC0003DMT400058554 Potato cytosol 27.89 20.66
Protein Annotations
EntrezGene:102590513Gene3D:2.60.120.330MapMan:9.2.2.3.1InterPro:DIOX_NGO:GO:0003674GO:GO:0003824
GO:GO:0005488GO:GO:0008150GO:GO:0008152GO:GO:0016491GO:GO:0046872GO:GO:0055114
InterPro:IPNS-likeInterPro:IPR005123InterPro:IPR027443UniProt:M0ZIQ1InterPro:Oxoglu/Fe-dep_dioxygenasePFAM:PF03171
PFAM:PF14226EnsemblPlantsGene:PGSC0003DMG400000582PGSC:PGSC0003DMG400000582EnsemblPlants:PGSC0003DMT400001570PFscan:PS51471PANTHER:PTHR10209
PANTHER:PTHR10209:SF371SUPFAM:SSF51197UniParc:UPI0002962B19RefSeq:XP_006347521.1::
Description
1-aminocyclopropane-1-carboxylate oxidase [Source:PGSC_GENE;Acc:PGSC0003DMG400000582]
Coordinates
chr3:-:47375813..47384509
Molecular Weight (calculated)
38225.6 Da
IEP (calculated)
5.808
GRAVY (calculated)
-0.356
Length
337 amino acids
Sequence
(BLAST)
001: METKVISSGI HHSTLPQSYI RPESDRPRLS DVVDCENVPI IDLGCGDQAQ IIRLIGEACQ TYGFFQVINH GVPKEVVEKM LGVAGEFFNL PVEEKLKLYS
101: DDPSKTMRLS TSFNVKKETV HNWRDYLRLH CHPLEKYAPE WPSNPSSFRD IVSRYCTEVR QLGFRLEEAI AESLGLEKEC IKDVLGEQGQ HMAINFYPPC
201: PQPELTYGLP AHTDPNSLTI LLQDLQVSGL QVLKDGKWLA VKPQPDAFVI NLGDQLQAVS NGKYKSVWHR AIVNSDQARM SVASFLCPCD SAKISAPKLL
301: TEDGSPVIYQ DFTYAEYYKK FWSRNLDQEH CLELFKN
Best Arabidopsis Sequence Match ( AT5G24530.1 )
(BLAST)
001: MAAKLISTGF RHTTLPENYV RPISDRPRLS EVSQLEDFPL IDLSSTDRSF LIQQIHQACA RFGFFQVINH GVNKQIIDEM VSVAREFFSM SMEEKMKLYS
101: DDPTKTTRLS TSFNVKKEEV NNWRDYLRLH CYPIHKYVNE WPSNPPSFKE IVSKYSREVR EVGFKIEELI SESLGLEKDY MKKVLGEQGQ HMAVNYYPPC
201: PEPELTYGLP AHTDPNALTI LLQDTTVCGL QILIDGQWFA VNPHPDAFVI NIGDQLQALS NGVYKSVWHR AVTNTENPRL SVASFLCPAD CAVMSPAKPL
301: WEAEDDETKP VYKDFTYAEY YKKFWSRNLD QEHCLENFLN N
Arabidopsis Description
DMR6Protein DOWNY MILDEW RESISTANCE 6 [Source:UniProtKB/Swiss-Prot;Acc:Q9FLV0]
SUBAcon: [mitochondrion]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.