Factsheet for PGSC0003DMT400029386

Subcellular Localization

min:

: max

Winner_takes_all: peroxisome, nucleus, cytosol

Predictor Summary:

nucleus 2
peroxisome 1
cytosol 2
mitochondrion 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Solyc10g005120.1.1	Tomato	cytosol	69.33	77.84
VIT_03s0017g02350.t01	Wine grape	cytosol	49.07	51.83
CDY32234	Canola	cytosol, nucleus, peroxisome	45.07	49.42
CDY34450	Canola	cytosol	45.07	49.42
KRG98061	Soybean	mitochondrion, plastid	46.13	49.29
Bra038447.1-P	Field mustard	cytosol, nucleus, peroxisome	44.53	48.83
GSMUA_Achr2P19210_001	Banana	cytosol	44.53	47.85
Os06t0162500-01	Rice	cytosol	44.0	46.88
KRH30715	Soybean	cytosol	45.33	46.32
TraesCS7B01G020000.1	Wheat	plastid	42.67	46.24
EER87904	Sorghum	plastid	42.4	46.09
HORVU7Hr1G025650.1	Barley	cytosol	42.4	45.82
TraesCS7A01G121400.1	Wheat	cytosol, peroxisome, plastid	42.13	45.66
TraesCS7D01G119600.1	Wheat	plastid	41.87	45.64
AT4G16330.2	Thale cress	plastid	42.93	44.23
Zm00001d045233_P002	Maize	plastid	42.13	40.62
PGSC0003DMT400031149	Potato	cytosol	29.07	30.62
PGSC0003DMT400049192	Potato	cytosol	29.6	30.33
PGSC0003DMT400028828	Potato	cytosol	28.27	29.44
PGSC0003DMT400069218	Potato	cytosol	26.4	28.95
PGSC0003DMT400013913	Potato	cytoskeleton, cytosol, peroxisome	19.73	28.24
PGSC0003DMT400013920	Potato	cytoskeleton, cytosol, peroxisome	19.73	28.03
PGSC0003DMT400001570	Potato	cytosol	25.07	27.89
PGSC0003DMT400036565	Potato	cytosol	25.87	27.56
PGSC0003DMT400041798	Potato	cytosol	24.27	27.08
PGSC0003DMT400025148	Potato	cytosol	20.0	26.98
PGSC0003DMT400067044	Potato	cytosol	23.47	26.19
PGSC0003DMT400054579	Potato	cytosol	23.73	26.1
PGSC0003DMT400083733	Potato	cytosol	24.8	25.83
PGSC0003DMT400051681	Potato	cytosol	23.2	25.82
PGSC0003DMT400009900	Potato	cytosol	26.13	25.65
PGSC0003DMT400009175	Potato	cytosol	24.53	25.56
PGSC0003DMT400070302	Potato	cytosol	25.07	25.47
PGSC0003DMT400025139	Potato	cytosol	22.67	25.45
PGSC0003DMT400049193	Potato	cytosol, mitochondrion, peroxisome	12.27	25.14
PGSC0003DMT400067586	Potato	cytosol, peroxisome, plastid	23.47	24.93
PGSC0003DMT400030676	Potato	mitochondrion	22.4	24.63
PGSC0003DMT400092726	Potato	cytosol, peroxisome, plastid	22.93	24.5
PGSC0003DMT400025150	Potato	cytosol	21.33	24.32
PGSC0003DMT400083728	Potato	cytosol	10.67	23.95
PGSC0003DMT400070444	Potato	cytosol, peroxisome, plastid	22.13	23.58
PGSC0003DMT400058554	Potato	cytosol	27.73	22.86
PGSC0003DMT400088016	Potato	cytosol	18.67	21.47
PGSC0003DMT400013924	Potato	cytosol	4.8	15.25

Protein Annotations

Gene3D:2.60.120.330	MapMan:50.1.13	ncoils:Coil	InterPro:DIOX_N	GO:GO:0003674	GO:GO:0003824
GO:GO:0008150	GO:GO:0008152	GO:GO:0016491	GO:GO:0055114	InterPro:IPNS-like	InterPro:IPR005123
InterPro:IPR027443	UniProt:M1ASQ7	InterPro:Oxoglu/Fe-dep_dioxygenase	PFAM:PF03171	PFAM:PF14226	EnsemblPlantsGene:PGSC0003DMG401011292
PGSC:PGSC0003DMG401011292	EnsemblPlants:PGSC0003DMT400029386	PANTHER:PTHR10209	PANTHER:PTHR10209:SF226	SUPFAM:SSF51197	UniParc:UPI00029657D2

Description

Strong similarity to naringenin 3-dioxygenase [Source:PGSC_GENE;Acc:PGSC0003DMG401011292]

Coordinates

chr10:+:197250..201574

Molecular Weight (calculated)

42284.9 Da

IEP (calculated)

4.394

GRAVY (calculated)

-0.315

Length

375 amino acids

Sequence
(BLAST)

001: METLRVQLLA EKGEISVPSQ YVQPPETRPQ IEKTNVKAAV PVIDLSSRTN LLDELKKACK EWGAFQVINH KVPISLLDDM RRVGRTFFEG RTMEEKLKYS
101: CDSASPASEG YGSRMLVASN DTVLDWRDYF DHHTLPSSRR NPSHWPESPA DYRKVVAEYS DHMKALAQEL LGLVSESLDL TCQCIENVVG EFYQNITISY
201: YPPCPQPELT LGLQSHSDFG AITLLIQDDV GGLEVFNNGE WVSVNPMSNA ICVILADQTE RVNPNPVDVQ IKKFMVLDQN LEERRRCEWT PTFTDTPEIL
301: DDKTITSVLE SACDDNDTEI ADTVKSHLDS QLPILDVGYA IQKTISPFVL FSAFFDTTEL EFSSLSFSVK ELTRT

Best Arabidopsis Sequence Match ( AT4G16330.2 )
(BLAST)

001: MYLMSSFSSS LPPYPFHSKI STIKTSSLGE LESKTTSDSH KSGFLLSTSS HRKLDLISHY PGDAASIPTV DLSSSDSARE AIGDACRDWG AFHVINHGVP
101: IHLLDRMRSL GLSFFQDSPM EEKLRYACDS TSAASEGYGS RMLLGAKDDV VLDWRDYFDH HTFPPSRRNP SHWPIHPSDY RQVVGEYGDE MKKLAQMLLG
201: LISESLGLPC SSIEEAVGEI YQNITVTYYP PCPQPELTLG LQSHSDFGAI TLLIQDDVEG LQLYKDAQWL TVPPISDAIL ILIADQTEII TNGRYKSAQH
301: RAVTNANRAR LSVATFHDPS KTARIAPVSQ LSPPSYKEVV YGQYVSSWYS KGPEGKRNLD ALLY

Arabidopsis Description

2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein [Source:UniProtKB/TrEMBL;Acc:F4JLS2]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.