Factsheet for PGSC0003DMT400070302

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 2
cytosol 3
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, nucleus
BaCelLo:	nucleus
MultiLoc:	cytosol
Plant-mPloc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Solyc11g007890.1.1	Tomato	cytosol	95.94	94.65
VIT_00s0250g00090.t01	Wine grape	cytosol	69.65	68.72
AT2G36690.1	Thale cress	cytosol, nucleus, peroxisome	60.98	61.48
PGSC0003DMT400009900	Potato	cytosol	63.14	60.99
Bra017227.1-P	Field mustard	cytosol	60.43	60.76
CDX75020	Canola	cytosol	60.16	60.33
GSMUA_AchrUn_...	Banana	cytosol, nucleus, peroxisome	60.16	58.27
GSMUA_Achr9P23620_001	Banana	cytosol	57.99	56.61
GSMUA_Achr4P04450_001	Banana	cytosol, mitochondrion	47.97	54.46
TraesCS4A01G311000.1	Wheat	cytosol	50.95	50.81
TraesCS7D01G279500.1	Wheat	cytosol	51.49	49.74
TraesCS4D01G002800.1	Wheat	cytosol, plastid	51.22	48.34
TraesCS4B01G003300.1	Wheat	plastid	50.68	48.32
EER96378	Sorghum	cytosol	51.49	48.22
Zm00001d049926_P001	Maize	cytosol	51.76	47.39
EES15170	Sorghum	cytosol	52.85	47.33
EES08336	Sorghum	cytosol	50.68	47.22
Os09t0570800-01	Rice	cytosol	47.7	47.06
TraesCS7B01G180300.1	Wheat	cytosol, endoplasmic reticulum, extracellular, golgi, peroxisome, plasma membrane, plastid, vacuole	50.95	46.53
TraesCS7A01G280900.1	Wheat	cytosol, endoplasmic reticulum, extracellular, golgi, peroxisome, plasma membrane, plastid, vacuole	51.22	46.32
HORVU4Hr1G000050.3	Barley	plastid	50.68	46.29
HORVU7Hr1G060070.9	Barley	cytosol, peroxisome	49.86	46.0
Os08t0560000-01	Rice	cytosol, endoplasmic reticulum, extracellular, golgi, peroxisome, plasma membrane, vacuole	50.14	45.57
Zm00001d031926_P001	Maize	cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole	52.57	44.09
PGSC0003DMT400067044	Potato	cytosol	38.75	42.56
Zm00001d052999_P001	Maize	cytosol	49.32	41.08
PGSC0003DMT400049193	Potato	cytosol, mitochondrion, peroxisome	19.78	39.89
PGSC0003DMT400092726	Potato	cytosol, peroxisome, plastid	37.4	39.32
PGSC0003DMT400001570	Potato	cytosol	35.5	38.87
PGSC0003DMT400083733	Potato	cytosol	36.59	37.5
PGSC0003DMT400013913	Potato	cytoskeleton, cytosol, peroxisome	26.29	37.02
PGSC0003DMT400013920	Potato	cytoskeleton, cytosol, peroxisome	26.29	36.74
PGSC0003DMT400054579	Potato	cytosol	33.88	36.66
PGSC0003DMT400069218	Potato	cytosol	33.88	36.55
PGSC0003DMT400067586	Potato	cytosol, peroxisome, plastid	34.69	36.26
PGSC0003DMT400088016	Potato	cytosol	31.71	35.89
PGSC0003DMT400051681	Potato	cytosol	32.52	35.61
PGSC0003DMT400013924	Potato	cytosol	11.11	34.75
PGSC0003DMT400049192	Potato	cytosol	33.33	33.61
PGSC0003DMT400031149	Potato	cytosol	32.25	33.43
PGSC0003DMT400028828	Potato	cytosol	32.25	33.06
PGSC0003DMT400030676	Potato	mitochondrion	30.08	32.55
PGSC0003DMT400036565	Potato	cytosol	29.27	30.68
PGSC0003DMT400070444	Potato	cytosol, peroxisome, plastid	28.73	30.11
PGSC0003DMT400025150	Potato	cytosol	26.83	30.09
PGSC0003DMT400009175	Potato	cytosol	29.0	29.72
PGSC0003DMT400025148	Potato	cytosol	22.22	29.5
PGSC0003DMT400041798	Potato	cytosol	26.83	29.46
PGSC0003DMT400083728	Potato	cytosol	13.01	28.74
PGSC0003DMT400025139	Potato	cytosol	23.58	26.05
PGSC0003DMT400029386	Potato	cytosol, nucleus, peroxisome	25.47	25.07
PGSC0003DMT400058554	Potato	cytosol	28.46	23.08

Protein Annotations

MapMan:11.6.3.3	Gene3D:2.60.120.330	InterPro:DIOX_N	GO:GO:0003674	GO:GO:0003824	GO:GO:0005488
GO:GO:0008150	GO:GO:0008152	GO:GO:0016491	GO:GO:0046872	GO:GO:0055114	InterPro:IPNS-like
InterPro:IPR005123	InterPro:IPR027443	UniProt:M1CLY5	InterPro:Oxoglu/Fe-dep_dioxygenase	PFAM:PF03171	PFAM:PF14226
EnsemblPlantsGene:PGSC0003DMG400027333	PGSC:PGSC0003DMG400027333	EnsemblPlants:PGSC0003DMT400070302	PRINTS:PR00682	PFscan:PS51471	PANTHER:PTHR10209
PANTHER:PTHR10209:SF152	SUPFAM:SSF51197	UniParc:UPI0002967592	SEG:seg	:	:

Description

Leucoanthocyanidin dioxygenase [Source:PGSC_GENE;Acc:PGSC0003DMG400027333]

Coordinates

chr11:-:4269654..4272628

Molecular Weight (calculated)

41999.3 Da

IEP (calculated)

7.078

GRAVY (calculated)

-0.347

Length

369 amino acids

Sequence
(BLAST)

001: MNILATEKIK ENYEEKIECR YQKGVRHLCE SGITKIPRKY ILPISDRPLI VKKEENFNLP IIDFAQLQGP NRSQVLKSLA KACEEYGFFQ LVNHGIHSDT
101: IQHIIEVGKK FFELPFEERA KYMSIDMQAP VRVGTSFNQN KDGVFCWRDF LKLSCHSLSS DLLSLWPSSP VDLREAASNY SNQAKFLYQL LVGAILESLG
201: LVNNENNNDS QNLKEFEDGS QLLVLNCYPS CPEPDLTLGM PPHSDYGLLT LLLQDEVKGL QIQHQGKWLT VEPIPNSFVV NVGDHLEIFS NGRYKSVLHR
301: VLVNSSKSRI SVASLHSLPY SSKIQPSPNL INESNPKLYK DTDFTTFLQY LSSCEHKSKS FLESRKLVN

Best Arabidopsis Sequence Match ( AT2G36690.2 )
(BLAST)

001: MSPSMIAPVM EEENKKYQKG VKHLCENGLT KVPTKYIWPE PDRPILTKSD KLIKPNKNLK LPLIDFAELL GPNRPHVLRT IAEACKTYGF FQVVNHGMEG
101: DVSKNMIDVC KRFFELPYEE RSKYMSSDMS APVRYGTSFN QIKDNVFCWR DFLKLYAHPL PDYLPHWPSS PSDFRSSAAT YAKETKEMFE MMVKAILESL
201: EIDGSDEAAK ELEEGSQVVV VNCYPPCPEP ELTLGMPPHS DYGFLTLLLQ DEVEGLQILY RDEWVTVDPI PGSFVVNVGD HLEIFSNGRY KSVLHRVLVN
301: STKPRISVAS LHSFPLTSVV KPSPKLVDKH NPSQYMDTDF TTFLQYITSR EPKWKNFLES RKIHHV

Arabidopsis Description

2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein [Source:UniProtKB/TrEMBL;Acc:F4INZ9]
SUBAcon: [peroxisome,nucleus,cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.