Factsheet for PGSC0003DMT400083728

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 2
cytosol 3
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, nucleus
BaCelLo:	nucleus
MultiLoc:	cytosol
Plant-mPloc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Solyc01g105650.2.1	Tomato	cytosol	92.81	43.54
KRH72414	Soybean	cytosol	43.71	21.47
PGSC0003DMT400067586	Potato	cytosol, peroxisome, plastid	44.91	21.25
KRH16797	Soybean	cytosol	42.52	20.88
KRH16798	Soybean	cytosol	42.52	20.88
PGSC0003DMT400083733	Potato	cytosol	43.11	20.0
GSMUA_Achr9P15020_001	Banana	cytosol	38.92	18.52
VIT_18s0001g06690.t01	Wine grape	cytosol	34.73	17.26
TraesCS5A01G048400.1	Wheat	cytosol	31.74	15.59
TraesCS3B01G351600.1	Wheat	cytosol	32.93	15.32
HORVU5Hr1G011540.3	Barley	cytosol	33.53	14.62
TraesCS5D01G058700.2	Wheat	cytosol	32.93	14.59
TraesCS3A01G315300.1	Wheat	cytosol, peroxisome, plastid	31.14	14.48
PGSC0003DMT400067044	Potato	cytosol	28.14	13.99
PGSC0003DMT400041798	Potato	cytosol	28.14	13.99
TraesCS5B01G053400.2	Wheat	cytosol	32.93	13.92
PGSC0003DMT400069218	Potato	cytosol	28.14	13.74
PGSC0003DMT400001570	Potato	cytosol	27.54	13.65
HORVU3Hr1G077080.2	Barley	cytosol, peroxisome, plastid	29.34	13.65
PGSC0003DMT400009900	Potato	cytosol	31.14	13.61
PGSC0003DMT400054579	Potato	cytosol	27.54	13.49
TraesCS3D01G316200.1	Wheat	cytosol	32.34	13.4
PGSC0003DMT400092726	Potato	cytosol, peroxisome, plastid	28.14	13.39
PGSC0003DMT400051681	Potato	cytosol	26.95	13.35
PGSC0003DMT400070302	Potato	cytosol	28.74	13.01
PGSC0003DMT400025148	Potato	cytosol	21.56	12.95
OQU80974	Sorghum	cytosol, mitochondrion, peroxisome, plastid	28.74	12.6
PGSC0003DMT400030676	Potato	mitochondrion	25.15	12.32
PGSC0003DMT400049192	Potato	cytosol	25.15	11.48
PGSC0003DMT400070444	Potato	cytosol, peroxisome, plastid	23.35	11.08
PGSC0003DMT400025139	Potato	cytosol	22.16	11.08
PGSC0003DMT400088016	Potato	cytosol	21.56	11.04
PGSC0003DMT400031149	Potato	cytosol	23.35	10.96
PGSC0003DMT400025150	Potato	cytosol	21.56	10.94
PGSC0003DMT400029386	Potato	cytosol, nucleus, peroxisome	23.95	10.67
PGSC0003DMT400036565	Potato	cytosol	22.16	10.51
PGSC0003DMT400013913	Potato	cytoskeleton, cytosol, peroxisome	16.17	10.31
PGSC0003DMT400028828	Potato	cytosol	22.16	10.28
PGSC0003DMT400013920	Potato	cytoskeleton, cytosol, peroxisome	16.17	10.23
PGSC0003DMT400009175	Potato	cytosol	18.56	8.61
PGSC0003DMT400058554	Potato	cytosol	18.56	6.81
PGSC0003DMT400049193	Potato	cytosol, mitochondrion, peroxisome	0.0	0.0
PGSC0003DMT400013924	Potato	cytosol	0.0	0.0
Zm00001d042655_P001	Maize	cytosol	0.0	0.0

Protein Annotations

EnsemblPlants:PGSC0003DMT400083728	EnsemblPlantsGene:PGSC0003DMG400033566	Gene3D:2.60.120.330	InterPro:DIOX_N	InterPro:IPNS-like	InterPro:IPR027443
PANTHER:PTHR10209	PANTHER:PTHR10209:SF369	PFAM:PF14226	PGSC:PGSC0003DMG400033566	SUPFAM:SSF51197	UniParc:UPI00029649C8
UniProt:M1D716	MapMan:35.2	:	:	:	:

Description

Flavonol synthase/flavanone 3-hydroxylase [Source:PGSC_GENE;Acc:PGSC0003DMG400033566]

Coordinates

chr1:+:82300860..82302867

Molecular Weight (calculated)

19597.5 Da

IEP (calculated)

7.232

GRAVY (calculated)

-0.390

Length

167 amino acids

Sequence
(BLAST)

001: MRSVKLVSEL PNLKAVPCNY YVDNHHKYSS PAIIDTNHDD SLIPIIDFSL LSSKDPHQHS KVIQQLGRAC QQWGFFMVVN HGIEESLMKE LIGVIKEFFL
101: MGEEDKWRYK GEKMFDPIKY GTSFNYTSKD ITTYWRDYLK LSLHPQLHCP DQPNNFRYFL SLNLCAF

Best Arabidopsis Sequence Match ( AT2G36690.1 )
(BLAST)

001: MSPSMIAPVM EEENKKYQKG VKHLCENGLT KVPTKYIWPE PDRPILTKSD KLIKPNKNLK LPLIDFAELL GPNRPHVLRT IAEACKTYGF FQVVNHGMEG
101: DVSKNMIDVC KRFFELPYEE RSKYMSSDMS APVRYGTSFN QIKDNVFCWR DFLKLYAHPL PDYLPHWPSS PSDFRSSAAT YAKETKEMFE MMVKAILESL
201: EIDGSDEAAK ELEEGSQVVV VNCYPPCPEP ELTLGMPPHS DYGFLTLLLQ DEVEGLQILY RDEWVTVDPI PGSFVVNVGD HLEIFSNGRY KSVLHRVLVN
301: STKPRISVAS LHSFPLTSVV KPSPKLVDKH NPSQYMDTDF TTFLQYITSR EPKWKNFLES RKIHHV

Arabidopsis Description

2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein [Source:UniProtKB/TrEMBL;Acc:F4INZ9]
SUBAcon: [peroxisome,nucleus,cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.