Factsheet for PGSC0003DMT400092726

Subcellular Localization

min:

: max

Winner_takes_all: cytosol, peroxisome, plastid

Predictor Summary:

nucleus 1
peroxisome 1
cytosol 2
mitochondrion 1
plastid 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
PGSC0003DMT400067044	Potato	cytosol	81.48	85.12
PGSC0003DMT400088016	Potato	cytosol	66.38	71.47
CDY30486	Canola	cytosol, nucleus, peroxisome	57.55	56.74
CDY23457	Canola	cytosol, nucleus, peroxisome	56.7	55.9
AT2G44800.1	Thale cress	cytosol, nucleus, peroxisome, plastid	56.7	55.74
AT3G60290.1	Thale cress	cytosol, nucleus, peroxisome	56.13	55.18
CDX74687	Canola	cytosol	55.84	54.6
Bra004867.1-P	Field mustard	cytosol	55.84	54.6
CDY56988	Canola	peroxisome	54.7	53.78
Bra014500.1-P	Field mustard	cytosol	54.7	53.78
KRH40180	Soybean	plastid	53.85	53.69
CDY42687	Canola	peroxisome	54.13	53.07
PGSC0003DMT400013913	Potato	cytoskeleton, cytosol, peroxisome	29.06	38.93
PGSC0003DMT400013920	Potato	cytoskeleton, cytosol, peroxisome	28.77	38.26
PGSC0003DMT400070302	Potato	cytosol	39.32	37.4
PGSC0003DMT400013924	Potato	cytosol	12.25	36.44
PGSC0003DMT400009900	Potato	cytosol	39.32	36.13
PGSC0003DMT400083733	Potato	cytosol	36.18	35.28
PGSC0003DMT400049193	Potato	cytosol, mitochondrion, peroxisome	17.95	34.43
PGSC0003DMT400001570	Potato	cytosol	32.48	33.83
PGSC0003DMT400069218	Potato	cytosol	32.76	33.63
PGSC0003DMT400067586	Potato	cytosol, peroxisome, plastid	33.33	33.14
PGSC0003DMT400049192	Potato	cytosol	32.48	31.15
PGSC0003DMT400028828	Potato	cytosol	31.34	30.56
PGSC0003DMT400025150	Potato	cytosol	28.49	30.4
PGSC0003DMT400036565	Potato	cytosol	29.63	29.55
PGSC0003DMT400051681	Potato	cytosol	28.21	29.38
PGSC0003DMT400030676	Potato	mitochondrion	28.49	29.33
PGSC0003DMT400054579	Potato	cytosol	28.49	29.33
PGSC0003DMT400031149	Potato	cytosol	29.63	29.21
PGSC0003DMT400083728	Potato	cytosol	13.39	28.14
PGSC0003DMT400041798	Potato	cytosol	26.78	27.98
PGSC0003DMT400070444	Potato	cytosol, peroxisome, plastid	27.35	27.27
PGSC0003DMT400025148	Potato	cytosol	21.37	26.98
PGSC0003DMT400025139	Potato	cytosol	25.64	26.95
PGSC0003DMT400009175	Potato	cytosol	27.64	26.94
PGSC0003DMT400029386	Potato	cytosol, nucleus, peroxisome	24.5	22.93
PGSC0003DMT400058554	Potato	cytosol	26.21	20.22

Protein Annotations

Gene3D:2.60.120.330	MapMan:50.1.13	InterPro:DIOX_N	GO:GO:0003674	GO:GO:0003824	GO:GO:0005488
GO:GO:0008150	GO:GO:0008152	GO:GO:0016491	GO:GO:0046872	GO:GO:0055114	InterPro:IPNS-like
InterPro:IPR005123	InterPro:IPR027443	UniProt:M1DQE8	InterPro:Oxoglu/Fe-dep_dioxygenase	PFAM:PF03171	PFAM:PF14226
EnsemblPlantsGene:PGSC0003DMG400042297	PGSC:PGSC0003DMG400042297	EnsemblPlants:PGSC0003DMT400092726	PFscan:PS51471	PANTHER:PTHR10209	PANTHER:PTHR10209:SF224
SUPFAM:SSF51197	UniParc:UPI0002958A2C	:	:	:	:

Description

Flavonol synthase/flavanone 3-hydroxylase [Source:PGSC_GENE;Acc:PGSC0003DMG400042297]

Coordinates

chr1:+:69155411..69156957

Molecular Weight (calculated)

39354.4 Da

IEP (calculated)

6.789

GRAVY (calculated)

-0.169

Length

351 amino acids

Sequence
(BLAST)

001: MRESSASANG SFTSAMTLIE EGLTYVPKRY VLPPSLRPDG TLCNTCLPIV DLSNRQHPLL RSQIIQDVHL ACKKFGFFQV VNHGIPLSVM DNAIHAASEF
101: FDLPTQDKRH LLTSNVCDPV RYGTSLNHVK DKVHFWRDFL KHYANPTSTW IDLWPSNPKC YKKKMVNYTM AAQKLQEGLM EVIFESLGLN TNYLHEDIAE
201: GSQVMAVNCY PACPEPDLTL GLPPHTDYGM ISIILQNHQG LQIMGQDEKW HSVPLIEGAL TVLLGDHMEV LTNGIYKSVV HRATVNSEKK RISIVSLHSL
301: TLGKKVRPAS ALVNEQNILS YKEGGFSDFL DFISGEDIVE AKYIDTLKIN T

Best Arabidopsis Sequence Match ( AT2G44800.1 )
(BLAST)

001: MEETKMSLLD DSFTSAMTLT NSGVPQVPDR YVLPPSQRPA LGSSLGTSET TLPVIDLSLL HQPFLRSLAI HEISMACKEF GFFQVINHGI PSSVVNDALD
101: AATQFFDLPV EEKMLLVSAN VHEPVRYGTS LNHSTDRVHY WRDFIKHYSH PLSKWIDMWP SNPPCYKDKV GKYAEATHLL HKQLIEAISE SLGLEKNYLQ
201: EEIEEGSQVM AVNCYPACPE PEMALGMPPH SDFSSLTILL QSSKGLQIMD CNKNWVCVPY IEGALIVQLG DQVEVMSNGI YKSVIHRVTV NKEVKRLSFA
301: SLHSLPLHKK ISPAPKLVNP NNAPAYGEFS FNDFLNYISS NDFIQERFID TIKKSSS

Arabidopsis Description

2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein [Source:UniProtKB/TrEMBL;Acc:F4IV21]
SUBAcon: [cytosol,nucleus,peroxisome,plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.