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Canola
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Canola
Subcellular Localization
min:
: max

 
Winner_takes_all: peroxisome

Predictor Summary:
  • nucleus 1
  • peroxisome 2
  • mitochondrion 1
  • cytosol 1
Predictors GFP MS/MS Papers
Winner Takes All:peroxisome
Any Predictor:cytosol, nucleus, peroxisome
BaCelLo:nucleus
MultiLoc:peroxisome
PProwler:mitochondrion
WoLF PSORT:peroxisome
YLoc:cytosol
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
Bra014500.1-P Field mustard cytosol 98.6 98.6
CDY42687 Canola peroxisome 95.24 94.97
AT3G60290.1 Thale cress cytosol, nucleus, peroxisome 85.99 85.99
CDX74687 Canola cytosol 79.55 79.11
CDY30486 Canola cytosol, nucleus, peroxisome 78.43 78.65
CDY23457 Canola cytosol, nucleus, peroxisome 76.19 76.4
KRH40180 Soybean plastid 58.26 59.09
PGSC0003DMT400067044 Potato cytosol 54.34 57.74
PGSC0003DMT400092726 Potato cytosol, peroxisome, plastid 53.78 54.7
Solyc01g090140.1.1 Tomato plastid 33.33 53.12
PGSC0003DMT400088016 Potato cytosol 45.94 50.31
CDX70044 Canola cytosol, nucleus, peroxisome 47.62 47.09
CDY65238 Canola cytosol, nucleus, peroxisome 47.34 46.81
CDY05445 Canola plastid 36.69 38.42
CDX75020 Canola cytosol 39.5 38.32
CDY05412 Canola mitochondrion 36.41 38.12
CDX80450 Canola mitochondrion 35.85 37.54
CDX88109 Canola mitochondrion 35.57 37.24
CDX90761 Canola plastid 35.29 36.0
CDY05103 Canola cytosol, nucleus, peroxisome 34.45 35.04
CDX86858 Canola cytosol 32.49 34.22
CDX99548 Canola cytosol 32.49 34.22
CDX90759 Canola cytosol 28.85 34.11
CDX99550 Canola cytosol 31.93 33.43
CDX69931 Canola cytoskeleton, cytosol, peroxisome 31.37 33.33
CDY21556 Canola cytoskeleton, cytosol, peroxisome 31.37 33.33
CDX99549 Canola vacuole 19.61 32.86
CDY14476 Canola plastid 31.93 32.29
CDY07746 Canola plastid 31.93 32.29
CDY18399 Canola plastid 31.93 32.2
CDY32234 Canola cytosol, nucleus, peroxisome 30.53 31.87
CDX76068 Canola cytosol 32.49 31.69
CDY02966 Canola cytosol 32.21 31.59
CDY34450 Canola cytosol 30.25 31.58
CDY11329 Canola cytosol 32.77 31.45
CDY68873 Canola plastid 31.09 31.44
CDX93319 Canola plastid 31.09 31.44
CDX80966 Canola cytosol 32.49 31.18
CDY04960 Canola cytosol 32.21 30.91
CDY39565 Canola cytosol 26.33 30.82
CDY69013 Canola cytosol 26.33 30.62
CDY48154 Canola cytosol 26.05 30.49
CDY41522 Canola cytosol 25.21 30.3
CDY01001 Canola cytosol 33.89 29.88
CDY14105 Canola cytosol, nucleus, peroxisome 31.93 29.69
CDY08545 Canola cytosol 33.61 29.63
CDY41520 Canola cytosol 19.61 28.34
CDY39860 Canola cytosol 24.37 28.16
CDY31361 Canola cytosol 24.09 27.74
CDX77983 Canola cytosol 27.73 27.65
CDX73739 Canola cytosol 27.45 27.37
CDX81188 Canola cytosol 24.37 27.19
CDX97750 Canola cytosol 16.81 27.15
CDX90656 Canola cytosol 26.61 27.14
CDX94133 Canola cytosol 26.89 26.82
CDY29008 Canola cytosol 26.05 26.57
CDY10816 Canola cytosol 26.61 26.54
CDY41286 Canola cytosol 26.61 26.54
CDX98776 Canola cytosol 26.89 24.43
CDX76765 Canola cytosol 16.25 24.37
CDX76159 Canola cytoskeleton, cytosol, peroxisome 19.61 23.89
CDX72185 Canola nucleus 31.93 22.62
CDY31363 Canola cytosol 24.09 20.38
CDY41521 Canola cytosol, mitochondrion 1.12 19.05
CDY27251 Canola nucleus 31.65 18.2
Protein Annotations
Gene3D:2.60.120.330MapMan:50.1.13GO:A0A078IY65UniProt:A0A078IY65EnsemblPlants:CDY56988ProteinID:CDY56988
ProteinID:CDY56988.1InterPro:DIOX_NGO:GO:0003674GO:GO:0003824GO:GO:0005488GO:GO:0008150
GO:GO:0008152GO:GO:0016491GO:GO:0046872GO:GO:0055114EnsemblPlantsGene:GSBRNA2T00020406001InterPro:IPNS-like
InterPro:IPR005123InterPro:IPR027443InterPro:Oxoglu/Fe-dep_dioxygenasePFAM:PF03171PFAM:PF14226PFscan:PS51471
PANTHER:PTHR10209PANTHER:PTHR10209:SF224SUPFAM:SSF51197UniParc:UPI0004EED540::
Description
BnaA04g27300DBnaA04g27300D protein [Source:UniProtKB/TrEMBL;Acc:A0A078IY65]
Coordinates
chrLK033540:+:2887..4763
Molecular Weight (calculated)
40096.9 Da
IEP (calculated)
6.227
GRAVY (calculated)
-0.248
Length
357 amino acids
Sequence
(BLAST)
001: MEETNKNVLG DCFTSAMALT ESGVPHVPTR YILPPSQRPV LSPSIGTGSI NLPVIDLSFL HDPLLRPSVI HEIEMACKEF GFFQVTNHGI SSPVVKDALH
101: AATRFFDLPA DEKMLLVSDD VHTPVRYGTS INHSTDSVHY WRDFIKHYSH PLSKWIDLWP SNPPCYKEKV GRYAEATHVL HKQLMEAISE SLGLEKSYLQ
201: EEIEEGSQVM AVNCYPACPE PEIALGMPPH SDFSSLTILL QSSQGLQIKD KNNNWVCVPY IEGALIVQLG DQVEVMSNGV YKSVVHRVTV NKDVNRLSFA
301: SLHSLPMNKK ISPAPQLVNE DKPAAYGDFS FNDFLEYISR NDLTKQRFID TVKKNKF
Best Arabidopsis Sequence Match ( AT3G60290.1 )
(BLAST)
001: MEETNKSVVN DYFTSAMELT ESGDPHVPTR YILPPSQRPM LGPSIGTSTI NLPVIDLSFL HDPLLRLCVI HEIELACKGF GFFQVINHGI SSAVVKDAQD
101: SATRFFDLPA DEKMHLVSDN FQEPVRYGTS INHSTDRVHY WRDFIKHYSH PLSNWINLWP SNPPCYKEKV GKYAEATHVL HKQLIEAISE SLGLEKNYLQ
201: EEIEEGSQVM AVNCYPACPE PEIALGMPPH SDYGSLTILL QSSEGLQIKD CNNNWVCVPY IEGALIVQLG DQVEVMSNGI YKSVVHRVTV NKDYKRLSFA
301: SLHSLPMHKK ISPATQLVNE NKPAAYGEFS FNDFLDYISR NDITQKRFID TLRKKNL
Arabidopsis Description
2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein [Source:UniProtKB/TrEMBL;Acc:F4JAP7]
SUBAcon: [peroxisome,nucleus,cytosol]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.