Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- cytosol 3
- peroxisome 1
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred from Arabidopsis experimental PPI
| Ath locusA | locusB | Ath locusB | Paper |
|---|---|---|---|
| AT3G51240.1 | CDX69931 | AT5G08640.1 | 18467451 |
| AT3G51240.1 | CDY21556 | AT5G08640.1 | 18467451 |
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra012862.1-P | Field mustard | cytosol | 96.57 | 96.57 |
| CDY29008 | Canola | cytosol | 96.57 | 96.57 |
| CDX73739 | Canola | cytosol | 92.29 | 90.22 |
| CDX77983 | Canola | cytosol | 92.29 | 90.22 |
| AT3G51240.1 | Thale cress | cytosol | 90.86 | 88.83 |
| VIT_18s0001g14310.t01 | Wine grape | cytosol | 82.29 | 80.45 |
| VIT_04s0023g03370.t01 | Wine grape | cytosol | 83.43 | 80.44 |
| Solyc02g083860.2.1 | Tomato | cytosol | 81.14 | 78.45 |
| PGSC0003DMT400009175 | Potato | cytosol | 80.57 | 78.33 |
| GSMUA_Achr2P02770_001 | Banana | cytosol | 80.29 | 75.54 |
| KRH69784 | Soybean | cytosol | 80.86 | 75.47 |
| KRH69787 | Soybean | nucleus | 80.29 | 74.73 |
| KRH08080 | Soybean | cytosol | 78.57 | 73.92 |
| GSMUA_Achr7P16780_001 | Banana | cytosol | 78.57 | 73.73 |
| Zm00001d001960_P001 | Maize | plastid | 74.57 | 71.31 |
| TraesCS2B01G613300.1 | Wheat | cytosol, mitochondrion, peroxisome, plastid | 70.86 | 71.06 |
| EES13031 | Sorghum | cytosol | 74.29 | 69.52 |
| TraesCS2B01G521500.1 | Wheat | golgi | 74.0 | 68.52 |
| TraesCS2A01G493500.1 | Wheat | golgi | 73.43 | 68.17 |
| TraesCS2D01G493400.1 | Wheat | golgi, nucleus | 73.14 | 67.72 |
| CDX76765 | Canola | cytosol | 44.0 | 64.71 |
| CDX76159 | Canola | cytoskeleton, cytosol, peroxisome | 53.14 | 63.48 |
| KXG27349 | Sorghum | plastid | 75.14 | 61.02 |
| HORVU2Hr1G110130.3 | Barley | mitochondrion | 72.29 | 56.98 |
| Os04t0662600-00 | Rice | mitochondrion, peroxisome | 57.71 | 49.75 |
| CDX99549 | Canola | vacuole | 23.71 | 38.97 |
| CDY05412 | Canola | mitochondrion | 34.57 | 35.48 |
| CDX88109 | Canola | mitochondrion | 34.29 | 35.19 |
| CDX80450 | Canola | mitochondrion | 34.29 | 35.19 |
| CDY05445 | Canola | plastid | 34.29 | 35.19 |
| CDX99548 | Canola | cytosol | 33.43 | 34.51 |
| CDX86858 | Canola | cytosol | 33.43 | 34.51 |
| CDX99550 | Canola | cytosol | 33.43 | 34.31 |
| CDY05103 | Canola | cytosol, nucleus, peroxisome | 34.29 | 34.19 |
| CDX90761 | Canola | plastid | 33.71 | 33.71 |
| CDY34450 | Canola | cytosol | 32.57 | 33.33 |
| CDY32234 | Canola | cytosol, nucleus, peroxisome | 32.57 | 33.33 |
| CDY18399 | Canola | plastid | 33.14 | 32.77 |
| CDY68873 | Canola | plastid | 32.57 | 32.29 |
| CDX93319 | Canola | plastid | 32.57 | 32.29 |
| CDY07746 | Canola | plastid | 32.29 | 32.01 |
| CDY14476 | Canola | plastid | 31.71 | 31.44 |
| CDX69931 | Canola | cytoskeleton, cytosol, peroxisome | 29.71 | 30.95 |
| CDY21556 | Canola | cytoskeleton, cytosol, peroxisome | 29.71 | 30.95 |
| CDX90759 | Canola | cytosol | 26.0 | 30.13 |
| CDY41286 | Canola | cytosol | 30.29 | 29.61 |
| CDX80966 | Canola | cytosol | 31.43 | 29.57 |
| CDX76068 | Canola | cytosol | 30.86 | 29.51 |
| CDY04960 | Canola | cytosol | 31.14 | 29.3 |
| CDY11329 | Canola | cytosol | 31.14 | 29.3 |
| CDY02966 | Canola | cytosol | 30.29 | 29.12 |
| CDY10816 | Canola | cytosol | 29.71 | 29.05 |
| CDY69013 | Canola | cytosol | 25.14 | 28.66 |
| CDY14105 | Canola | cytosol, nucleus, peroxisome | 31.43 | 28.65 |
| CDY41520 | Canola | cytosol | 20.0 | 28.34 |
| CDY48154 | Canola | cytosol | 24.57 | 28.2 |
| CDY39565 | Canola | cytosol | 24.57 | 28.2 |
| CDY01001 | Canola | cytosol | 32.57 | 28.15 |
| CDX75020 | Canola | cytosol | 29.14 | 27.72 |
| CDY08545 | Canola | cytosol | 32.0 | 27.65 |
| CDX94133 | Canola | cytosol | 28.29 | 27.65 |
| CDY41522 | Canola | cytosol | 23.43 | 27.61 |
| CDY30486 | Canola | cytosol, nucleus, peroxisome | 28.0 | 27.53 |
| CDX74687 | Canola | cytosol | 28.0 | 27.3 |
| CDY23457 | Canola | cytosol, nucleus, peroxisome | 27.43 | 26.97 |
| CDY39860 | Canola | cytosol | 23.71 | 26.86 |
| CDY56988 | Canola | peroxisome | 27.14 | 26.61 |
| CDY42687 | Canola | peroxisome | 27.14 | 26.54 |
| CDY31361 | Canola | cytosol | 23.43 | 26.45 |
| Os08t0480200-01 | Rice | cytosol | 25.43 | 26.41 |
| CDX98776 | Canola | cytosol | 28.86 | 25.7 |
| CDX81188 | Canola | cytosol | 23.14 | 25.31 |
| CDX97750 | Canola | cytosol | 15.43 | 24.43 |
| CDY41521 | Canola | cytosol, mitochondrion | 1.43 | 23.81 |
| CDY65238 | Canola | cytosol, nucleus, peroxisome | 22.57 | 21.88 |
| CDX70044 | Canola | cytosol, nucleus, peroxisome | 22.57 | 21.88 |
| CDX72185 | Canola | nucleus | 31.43 | 21.83 |
| CDY31363 | Canola | cytosol | 23.43 | 19.43 |
| CDY27251 | Canola | nucleus | 30.86 | 17.39 |
| Os08t0480100-01 | Rice | cytosol, endoplasmic reticulum, plastid | 0.57 | 0.32 |
Protein Annotations
| Gene3D:2.60.120.330 | MapMan:9.2.2.4.3 | GO:A0A078DN12 | EnsemblPlants:CDX90656 | ProteinID:CDX90656 | ProteinID:CDX90656.1 |
| InterPro:DIOX_N | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0016491 |
| GO:GO:0055114 | EnsemblPlantsGene:GSBRNA2T00151310001 | InterPro:IPNS-like | InterPro:IPR005123 | InterPro:IPR027443 | InterPro:Oxoglu/Fe-dep_dioxygenase |
| PFAM:PF03171 | PFAM:PF14226 | PFscan:PS51471 | PANTHER:PTHR10209 | PANTHER:PTHR10209:SF137 | SUPFAM:SSF51197 |
| UniParc:UPI0004EF0B95 | SEG:seg | : | : | : | : |
Description
BnaA03g41250D
Coordinates
chrLK031863:-:1371426..1372769
Molecular Weight (calculated)
39167.7 Da
IEP (calculated)
5.199
GRAVY (calculated)
-0.424
Length
350 amino acids
Sequence
(BLAST)
(BLAST)
001: MAPATLTELA GESELNSKFV RDVDERPKVA YNEFSNEIPV ISLAGIDHVG GKRGDICRQI VEACEDWGVF QVVDHGVDTK LVADMTRLAS DFFSLPPEDK
101: LKFDMSGGKK GGFIVSSHLQ GEVVQDWREI VTYFSYPVRN RNYSRWPNKP EGWVKVTEEY SEKLMELACK LLEILSEAMG LEKEALTNAC VDMDQKIVVN
201: YYPKCPQPDL TLGLKRHTDP GTITLLLQDQ VGGLQATRDD GKTWITVQPV EGAFVVNLGD HGHYLSNGRF KNADHQAVVN SNSSRLSIAT FQNPAPEATV
301: YPLKVREGEK PILEEPITFA EMYKRKMGRD LELARLKKLA KEKQGDCEAS
101: LKFDMSGGKK GGFIVSSHLQ GEVVQDWREI VTYFSYPVRN RNYSRWPNKP EGWVKVTEEY SEKLMELACK LLEILSEAMG LEKEALTNAC VDMDQKIVVN
201: YYPKCPQPDL TLGLKRHTDP GTITLLLQDQ VGGLQATRDD GKTWITVQPV EGAFVVNLGD HGHYLSNGRF KNADHQAVVN SNSSRLSIAT FQNPAPEATV
301: YPLKVREGEK PILEEPITFA EMYKRKMGRD LELARLKKLA KEKQGDCEAS
001: MAPGTLTELA GESKLNSKFV RDEDERPKVA YNVFSDEIPV ISLAGIDDVD GKRGEICRQI VEACENWGIF QVVDHGVDTN LVADMTRLAR DFFALPPEDK
101: LRFDMSGGKK GGFIVSSHLQ GEAVQDWREI VTYFSYPVRN RDYSRWPDKP EGWVKVTEEY SERLMSLACK LLEVLSEAMG LEKESLTNAC VDMDQKIVVN
201: YYPKCPQPDL TLGLKRHTDP GTITLLLQDQ VGGLQATRDN GKTWITVQPV EGAFVVNLGD HGHFLSNGRF KNADHQAVVN SNSSRLSIAT FQNPAPDATV
301: YPLKVREGEK AILEEPITFA EMYKRKMGRD LELARLKKLA KEERDHKEVD KPVDQIFA
101: LRFDMSGGKK GGFIVSSHLQ GEAVQDWREI VTYFSYPVRN RDYSRWPDKP EGWVKVTEEY SERLMSLACK LLEVLSEAMG LEKESLTNAC VDMDQKIVVN
201: YYPKCPQPDL TLGLKRHTDP GTITLLLQDQ VGGLQATRDN GKTWITVQPV EGAFVVNLGD HGHFLSNGRF KNADHQAVVN SNSSRLSIAT FQNPAPDATV
301: YPLKVREGEK AILEEPITFA EMYKRKMGRD LELARLKKLA KEERDHKEVD KPVDQIFA
Arabidopsis Description
F3HNaringenin,2-oxoglutarate 3-dioxygenase [Source:UniProtKB/Swiss-Prot;Acc:Q9S818]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.