CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 1
cytosol 4
peroxisome 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

PPI

Inferred distinct locusB in Crop

locusB	locations
KRH16579
KRH18787
KRH53203

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT3G51240.1	KRH16579	AT5G08640.1	18467451
AT3G51240.1	KRH18787	AT5G08640.1	18467451
AT3G51240.1	KRH53203	AT5G08640.1	18467451

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH69787	Soybean	nucleus	96.53	96.28
KRH08080	Soybean	cytosol	85.07	85.75
CDX77983	Canola	cytosol	80.0	83.8
Bra036828.1-P	Field mustard	cytosol	79.73	83.52
CDX73739	Canola	cytosol	78.93	82.68
AT3G51240.1	Thale cress	cytosol	78.67	82.4
CDX90656	Canola	cytosol	75.47	80.86
CDY29008	Canola	cytosol	74.67	80.0
KRH76658	Soybean	cytosol	77.33	79.45
Bra012862.1-P	Field mustard	cytosol	74.13	79.43
GSMUA_Achr2P02770_001	Banana	cytosol	76.27	76.88
GSMUA_Achr7P16780_001	Banana	cytosol	75.73	76.14
Zm00001d001960_P001	Maize	plastid	69.6	71.31
EES13031	Sorghum	cytosol	70.67	70.86
TraesCS2B01G613300.1	Wheat	cytosol, mitochondrion, peroxisome, plastid	64.8	69.63
TraesCS2B01G521500.1	Wheat	golgi	70.13	69.58
TraesCS2A01G493500.1	Wheat	golgi	69.87	69.5
TraesCS2D01G493400.1	Wheat	golgi, nucleus	69.6	69.05
KXG27349	Sorghum	plastid	71.47	62.18
Bra014831.1-P	Field mustard	cytosol	51.73	60.25
CDX76765	Canola	cytosol	38.13	60.08
CDX76159	Canola	cytoskeleton, cytosol, peroxisome	46.13	59.04
HORVU2Hr1G110130.3	Barley	mitochondrion	69.07	58.33
Os04t0662600-00	Rice	mitochondrion, peroxisome	56.27	51.97
KRH38051	Soybean	cytosol, peroxisome	20.53	39.69
KRH53636	Soybean	cytosol	33.87	37.57
KRH64291	Soybean	cytosol	33.6	37.28
KRH06343	Soybean	cytosol	34.13	37.1
KRH47765	Soybean	cytosol	33.87	36.81
KRH68971	Soybean	cytosol	32.8	35.24
KRH14938	Soybean	cytosol	32.27	33.52
KRG93692	Soybean	cytosol, nucleus, peroxisome	29.33	32.64
KRH74519	Soybean	cytosol	30.4	32.57
KRG98061	Soybean	mitochondrion, plastid	30.13	32.19
KRH65721	Soybean	cytosol	32.0	32.17
KRH57850	Soybean	cytosol	28.27	32.02
KRH73197	Soybean	cytosol	32.27	32.01
KRH00254	Soybean	plastid	29.6	31.9
KRH18340	Soybean	cytosol	28.53	31.75
KRH30715	Soybean	cytosol	30.93	31.61
KRG97722	Soybean	cytosol	30.13	31.3
KRH32174	Soybean	cytosol	28.27	31.09
KRH27988	Soybean	cytosol	29.07	30.97
KRH77456	Soybean	cytosol	29.07	30.97
KRH53203	Soybean	cytosol	27.47	30.93
KRH49391	Soybean	cytosol	31.47	30.89
KRH31155	Soybean	cytosol	29.33	30.47
KRH67790	Soybean	cytosol	28.8	29.51
KRH32602	Soybean	cytosol	29.6	29.06
KRH18787	Soybean	cytosol	25.87	29.04
KRH01377	Soybean	cytosol, plastid	26.13	28.99
KRH19976	Soybean	cytosol	29.33	28.87
KRH40180	Soybean	plastid	26.93	28.69
KRG96078	Soybean	cytosol	28.27	28.27
KRH16579	Soybean	cytosol, mitochondrion	22.67	28.15
KRH72414	Soybean	cytosol	25.33	27.94
KRH07794	Soybean	cytosol	23.47	27.94
KRH16797	Soybean	cytosol	24.8	27.35
KRH69638	Soybean	cytosol, nucleus, peroxisome, plastid	17.07	27.35
KRH53489	Soybean	cytosol	26.13	27.07
Os08t0480200-01	Rice	cytosol	23.73	26.41
KRH16798	Soybean	cytosol	23.47	25.88
KRH76176	Soybean	cytosol	21.33	25.72
KRH45093	Soybean	cytosol, mitochondrion, nucleus, peroxisome	22.4	25.69
KRH49802	Soybean	cytosol	14.13	25.48
KRH42116	Soybean	plastid	23.73	24.52
KRH18071	Soybean	cytosol	20.8	22.22
Os08t0480100-01	Rice	cytosol, endoplasmic reticulum, plastid	0.53	0.32

Protein Annotations

Gene3D:2.60.120.330	EntrezGene:732548	MapMan:9.2.2.4.3	ProteinID:AAU06217.1	ProteinID:AAY82085.1	EMBL:ACUP02000729
EMBL:AY595420	EMBL:AY669324	EMBL:BT096691	ncoils:Coil	InterPro:DIOX_N	EMBL:FJ770474
EnsemblPlantsGene:GLYMA_02G048400	GO:GO:0003674	GO:GO:0003824	GO:GO:0005488	GO:GO:0008150	GO:GO:0008152
GO:GO:0009058	GO:GO:0009416	GO:GO:0009628	GO:GO:0009813	GO:GO:0016491	GO:GO:0045486
GO:GO:0046872	GO:GO:0055114	InterPro:IPNS-like	InterPro:IPR005123	InterPro:IPR027443	EnsemblPlants:KRH69784
ProteinID:KRH69784	ProteinID:KRH69784.1	ProteinID:KRH69785.1	InterPro:Oxoglu/Fe-dep_dioxygenase	PFAM:PF03171	PFAM:PF14226
PFscan:PS51471	PANTHER:PTHR10209	PANTHER:PTHR10209:SF137	UniProt:Q53B69	SUPFAM:SSF51197	UniParc:UPI000011E2A8

Description

hypothetical protein

Coordinates

chr2:-:4440520..4444078

Molecular Weight (calculated)

42674.9 Da

IEP (calculated)

5.534

GRAVY (calculated)

-0.553

Length

375 amino acids

Sequence
(BLAST)

001: MAPTAKTLTY LAQEKTLESS FVRDEEERPK VAYNEFSDEI PVISLAGIDE VDGRRREICE KIVEACENWG IFQVVDHGVD QQLVAEMTRL AKEFFALPPD
101: EKLRFDMSGA KKGGFIVSSH LQGESVQDWR EIVTYFSYPK RERDYSRWPD TPEGWRSVTE EYSDKVMGLA CKLMEVLSEA MGLEKEGLSK ACVDMDQKVV
201: VNYYPKCPQP DLTLGLKRHT DPGTITLLLQ DQVGGLQATR DNGKTWITVQ PVEAAFVVNL GDHAHYLSNG RFKNADHQAV VNSNHSRLSI ATFQNPAPNA
301: TVYPLKIREG EKPVMEEPIT FAEMYRRKMS KDIEIARMKK LAKEKHLQDL ENEKHLQELD QKAKLEAKPL KEILA

Best Arabidopsis Sequence Match ( AT3G51240.1 )
(BLAST)

001: MAPGTLTELA GESKLNSKFV RDEDERPKVA YNVFSDEIPV ISLAGIDDVD GKRGEICRQI VEACENWGIF QVVDHGVDTN LVADMTRLAR DFFALPPEDK
101: LRFDMSGGKK GGFIVSSHLQ GEAVQDWREI VTYFSYPVRN RDYSRWPDKP EGWVKVTEEY SERLMSLACK LLEVLSEAMG LEKESLTNAC VDMDQKIVVN
201: YYPKCPQPDL TLGLKRHTDP GTITLLLQDQ VGGLQATRDN GKTWITVQPV EGAFVVNLGD HGHFLSNGRF KNADHQAVVN SNSSRLSIAT FQNPAPDATV
301: YPLKVREGEK AILEEPITFA EMYKRKMGRD LELARLKKLA KEERDHKEVD KPVDQIFA

Arabidopsis Description

F3HNaringenin,2-oxoglutarate 3-dioxygenase [Source:UniProtKB/Swiss-Prot;Acc:Q9S818]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.