CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 4
plastid 1
peroxisome 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH27988	Soybean	cytosol	94.89	94.89
VIT_02s0025g04720.t01	Wine grape	cytosol, peroxisome, plastid	82.1	81.41
AT4G22880.2	Thale cress	cytosol	78.69	77.81
CDY10816	Canola	cytosol	78.98	77.65
Bra013652.1-P	Field mustard	cytosol	78.69	77.37
CDX94133	Canola	cytosol	78.41	77.09
CDY41286	Canola	cytosol	78.41	77.09
Bra019350.1-P	Field mustard	cytosol	78.12	77.03
CDX98776	Canola	cytosol	78.69	70.48
GSMUA_Achr5P04080_001	Banana	cytosol, peroxisome, plastid	69.03	67.5
Solyc08g080040.2.1	Tomato	cytosol	78.98	66.51
PGSC0003DMT400058554	Potato	cytosol	77.84	60.22
Zm00001d038073_P001	Maize	cytosol	30.68	49.77
Os01t0372500-00	Rice	cytosol	51.14	48.0
Zm00001d048800_P001	Maize	cytosol	26.7	47.96
Os06t0626700-00	Rice	cytosol	50.57	47.72
Zm00001d014914_P001	Maize	cytosol	52.56	46.84
EES04312	Sorghum	cytosol	51.7	45.61
KRH57850	Soybean	cytosol	41.48	44.11
TraesCS2B01G613000.1	Wheat	cytosol, extracellular, peroxisome	44.89	43.89
HORVU5Hr1G094280.1	Barley	cytosol, peroxisome	47.44	43.26
KRH53203	Soybean	cytosol	38.92	41.14
TraesCS6A01G041800.1	Wheat	cytosol	45.45	40.71
KRH18787	Soybean	cytosol	38.35	40.42
KRH16579	Soybean	cytosol, mitochondrion	34.38	40.07
KRH38051	Soybean	cytosol, peroxisome	21.31	38.66
TraesCS6B01G006200.1	Wheat	cytosol	46.59	37.27
TraesCS6D01G004300.1	Wheat	cytosol	46.31	37.21
TraesCS6A01G001500.1	Wheat	cytosol	46.31	37.21
KRH65721	Soybean	cytosol	35.23	33.24
KRH14938	Soybean	cytosol	34.09	33.24
KRH31155	Soybean	cytosol	33.52	32.69
KRG97722	Soybean	cytosol	33.52	32.69
KRH00254	Soybean	plastid	31.82	32.18
KRH73197	Soybean	cytosol	34.38	32.01
KRH49391	Soybean	cytosol	34.66	31.94
KRH64291	Soybean	cytosol	30.4	31.66
KRH53636	Soybean	cytosol	30.4	31.66
KRG98061	Soybean	mitochondrion, plastid	31.25	31.34
KRH47765	Soybean	cytosol	30.68	31.3
KRH68971	Soybean	cytosol	30.97	31.23
KRH06343	Soybean	cytosol	30.11	30.72
KRH76658	Soybean	cytosol	31.82	30.68
KRH16798	Soybean	cytosol	29.55	30.59
KRH72414	Soybean	cytosol	29.55	30.59
KRH16797	Soybean	cytosol	28.69	29.71
KRH30715	Soybean	cytosol	30.68	29.43
KRH69787	Soybean	nucleus	31.25	29.26
KRH69784	Soybean	cytosol	30.97	29.07
KRH08080	Soybean	cytosol	30.68	29.03
KRH32174	Soybean	cytosol	27.84	28.74
KRH49802	Soybean	cytosol	16.76	28.37
KRH53489	Soybean	cytosol	28.98	28.18
KRH76176	Soybean	cytosol	24.72	27.97
KRH32602	Soybean	cytosol	29.83	27.49
KRG96078	Soybean	cytosol	29.26	27.47
KRH74519	Soybean	cytosol	27.27	27.43
KRH19976	Soybean	cytosol	29.55	27.3
KRH67790	Soybean	cytosol	28.12	27.05
KRH42116	Soybean	plastid	27.84	27.0
KRH18340	Soybean	cytosol	25.57	26.71
KRG93692	Soybean	cytosol, nucleus, peroxisome	25.57	26.71
KRH07794	Soybean	cytosol	23.58	26.35
KRH01377	Soybean	cytosol, plastid	25.28	26.33
KRH40180	Soybean	plastid	25.85	25.85
KRH69638	Soybean	cytosol, nucleus, peroxisome, plastid	16.48	24.79
KRH18071	Soybean	cytosol	24.72	24.79
KRH45093	Soybean	cytosol, mitochondrion, nucleus, peroxisome	19.6	21.1

Protein Annotations

Gene3D:2.60.120.330	EntrezGene:547615	MapMan:9.2.2.9.2	EMBL:ACUP02000673	EMBL:BT095278	UniProt:C6TCJ0
InterPro:DIOX_N	EnsemblPlantsGene:GLYMA_01G214200	GO:GO:0003674	GO:GO:0003824	GO:GO:0005488	GO:GO:0008150
GO:GO:0008152	GO:GO:0016491	GO:GO:0046872	GO:GO:0055114	InterPro:IPNS-like	InterPro:IPR005123
InterPro:IPR027443	EnsemblPlants:KRH77456	ProteinID:KRH77456	ProteinID:KRH77456.1	InterPro:Oxoglu/Fe-dep_dioxygenase	PFAM:PF03171
PFAM:PF14226	PFscan:PS51471	PANTHER:PTHR10209	PANTHER:PTHR10209:SF190	SUPFAM:SSF51197	UniParc:UPI0001B161A6

Description

hypothetical protein

Coordinates

chr1:-:54530306..54532393

Molecular Weight (calculated)

39945.2 Da

IEP (calculated)

5.861

GRAVY (calculated)

-0.398

Length

352 amino acids

Sequence
(BLAST)

001: MGTVAPRVES LASSGIKCIP KEYVRPQEEL KSIGNVFEEE KKEGLQVPTI DLREIDSEDE VVRGKCREKL KKAAEEWGVM HLVNHGIPDE LIERVKKAGE
101: TFFGLAVEEK EKYANDLESG KIQGYGSKLA NNASGQLEWE DYFFHLAFPE DKRDLSFWPK KPADYIEVTS EYAKRLRGLA TKILEALSIG LGLEGRRLEK
201: EVGGMEELLL QLKINYYPIC PQPELALGVE AHTDVSSLTF LLHNMVPGLQ LFYEGQWVTA KCVPDSILMH IGDTIEILSN GKYKSILHRG LVNKEKVRIS
301: WAVFCEPPKE KIILQPLPEL VTETEPARFP PRTFAQHIHH KLFRKDQEGL PN

Best Arabidopsis Sequence Match ( AT4G22880.1 )
(BLAST)

001: MVAVERVESL AKSGIISIPK EYIRPKEELE SINDVFLEEK KEDGPQVPTI DLKNIESDDE KIRENCIEEL KKASLDWGVM HLINHGIPAD LMERVKKAGE
101: EFFSLSVEEK EKYANDQATG KIQGYGSKLA NNASGQLEWE DYFFHLAYPE EKRDLSIWPK TPSDYIEATS EYAKCLRLLA TKVFKALSVG LGLEPDRLEK
201: EVGGLEELLL QMKINYYPKC PQPELALGVE AHTDVSALTF ILHNMVPGLQ LFYEGKWVTA KCVPDSIVMH IGDTLEILSN GKYKSILHRG LVNKEKVRIS
301: WAVFCEPPKD KIVLKPLPEM VSVESPAKFP PRTFAQHIEH KLFGKEQEEL VSEKND

Arabidopsis Description

LDOXAT4G22880 protein [Source:UniProtKB/TrEMBL;Acc:Q0WWD6]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.