Subcellular Localization
min:
: max
Winner_takes_all: peroxisome, extracellular, cytosol
Predictor Summary:
Predictor Summary:
- peroxisome 1
- mitochondrion 1
- extracellular 1
- cytosol 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| HORVU5Hr1G094280.1 | Barley | cytosol, peroxisome | 85.28 | 79.53 |
| TraesCS6B01G006200.1 | Wheat | cytosol | 83.33 | 68.18 |
| Os06t0626700-00 | Rice | cytosol | 65.28 | 63.0 |
| Os01t0372500-00 | Rice | cytosol | 64.72 | 62.13 |
| EES04312 | Sorghum | cytosol | 65.83 | 59.4 |
| Zm00001d014914_P001 | Maize | cytosol | 64.44 | 58.73 |
| GSMUA_Achr5P04080_001 | Banana | cytosol, peroxisome, plastid | 48.61 | 48.61 |
| VIT_02s0025g04720.t01 | Wine grape | cytosol, peroxisome, plastid | 44.72 | 45.35 |
| KRH77456 | Soybean | cytosol | 43.89 | 44.89 |
| KRH27988 | Soybean | cytosol | 43.33 | 44.32 |
| AT4G22880.2 | Thale cress | cytosol | 43.61 | 44.1 |
| Bra019350.1-P | Field mustard | cytosol | 43.61 | 43.98 |
| Bra013652.1-P | Field mustard | cytosol | 43.06 | 43.3 |
| CDY41286 | Canola | cytosol | 43.06 | 43.3 |
| CDX94133 | Canola | cytosol | 43.06 | 43.3 |
| CDY10816 | Canola | cytosol | 42.22 | 42.46 |
| CDX98776 | Canola | cytosol | 43.06 | 39.44 |
| Solyc08g080040.2.1 | Tomato | cytosol | 44.72 | 38.52 |
| TraesCS4B01G344800.1 | Wheat | cytosol | 34.17 | 37.96 |
| TraesCS6B01G362100.1 | Wheat | cytosol | 34.44 | 37.13 |
| TraesCS4B01G344900.1 | Wheat | cytosol, plastid | 30.83 | 35.92 |
| PGSC0003DMT400058554 | Potato | cytosol | 45.0 | 35.6 |
| TraesCS1B01G088600.1 | Wheat | cytoskeleton, cytosol, peroxisome | 33.33 | 33.52 |
| TraesCS4B01G328300.1 | Wheat | cytosol | 23.89 | 32.09 |
| TraesCS3B01G383900.1 | Wheat | cytosol | 32.78 | 31.64 |
| TraesCS4B01G195000.1 | Wheat | cytosol | 31.94 | 31.25 |
| TraesCS4B01G346900.1 | Wheat | cytosol | 28.06 | 30.06 |
| TraesCS5B01G153100.1 | Wheat | cytosol, nucleus, peroxisome | 30.0 | 29.51 |
| TraesCS7B01G020000.1 | Wheat | plastid | 28.33 | 29.48 |
| TraesCS2B01G413000.1 | Wheat | cytosol, nucleus, peroxisome | 26.67 | 28.24 |
| TraesCS2B01G613300.1 | Wheat | cytosol, mitochondrion, peroxisome, plastid | 27.22 | 28.08 |
| TraesCS2B01G412900.1 | Wheat | plastid | 27.22 | 28.08 |
| TraesCS3B01G444500.1 | Wheat | cytosol | 26.11 | 27.41 |
| TraesCS1B01G052600.1 | Wheat | cytosol | 26.11 | 27.17 |
| TraesCS6B01G046800.1 | Wheat | plastid | 25.28 | 26.3 |
| TraesCS7B01G063700.1 | Wheat | plastid | 24.17 | 26.05 |
| TraesCS2B01G521500.1 | Wheat | golgi | 26.39 | 25.13 |
| TraesCS6B01G318000.1 | Wheat | plastid | 23.61 | 25.0 |
| TraesCS6B01G317900.1 | Wheat | cytosol | 18.61 | 24.81 |
| TraesCS6B01G318100.1 | Wheat | plastid | 23.61 | 24.78 |
| TraesCS3B01G479500.1 | Wheat | cytosol | 23.89 | 24.71 |
| TraesCS4B01G003300.1 | Wheat | plastid | 26.39 | 24.55 |
| TraesCS6B01G044600.1 | Wheat | cytosol | 23.61 | 24.43 |
| TraesCS6B01G048100.1 | Wheat | plastid | 22.5 | 24.32 |
| TraesCS2B01G568900.1 | Wheat | mitochondrion, plastid | 22.5 | 24.11 |
| TraesCS7B01G180300.1 | Wheat | cytosol, endoplasmic reticulum, extracellular, golgi, peroxisome, plasma membrane, plastid, vacuole | 26.94 | 24.01 |
| TraesCS3B01G486500.1 | Wheat | cytosol | 23.06 | 23.78 |
| TraesCS5B01G053400.2 | Wheat | cytosol | 25.56 | 23.29 |
| TraesCS6B01G047100.1 | Wheat | extracellular, vacuole | 22.5 | 23.28 |
| TraesCS2B01G568800.1 | Wheat | cytosol, nucleus, peroxisome | 21.11 | 23.17 |
| TraesCS2B01G514200.1 | Wheat | cytosol, nucleus, peroxisome | 20.83 | 22.94 |
| TraesCS3B01G351600.1 | Wheat | cytosol | 22.5 | 22.56 |
Protein Annotations
| EnsemblPlants:TraesCS2B01G613000.1 | EnsemblPlantsGene:TraesCS2B01G613000 | Gene3D:2.60.120.330 | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0008150 |
| GO:GO:0008152 | GO:GO:0016491 | GO:GO:0055114 | InterPro:DIOX_N | InterPro:IPNS-like | InterPro:IPR005123 |
| InterPro:IPR027443 | InterPro:Oxoglu/Fe-dep_dioxygenase | PANTHER:PTHR10209 | PANTHER:PTHR10209:SF190 | PFAM:PF03171 | PFAM:PF14226 |
| PFscan:PS51471 | SEG:seg | SUPFAM:SSF51197 | MapMan:9.2.2.9.2 | : | : |
Description
No Description!
Coordinates
chr2B:+:792389026..792390108
Molecular Weight (calculated)
39015.4 Da
IEP (calculated)
5.134
GRAVY (calculated)
-0.145
Length
360 amino acids
Sequence
(BLAST)
(BLAST)
001: MARVEALSMS GLSVIPVEYV RSMDERQSLG DAYDQAAASW STAGCQRIPI VNVAPFDGAD PSSPASAAVV DAVRAAAEDW GVMHVAGHGI QDDLIDALRG
101: AGMGFFGMPI ADKEAYANNP AAGILEGYGS RLAGSAGEDG KREWEDYLFH QLHPDARADH ARWPAHPPEY VPVTKSFGER VSELAARLLA ILSLGLGVPA
201: PTLERRLRLS DEEVAVEDDL LLKMKINYYP PCPQPELAVG VEAHTDVSAL SFILTNGVPG LQVLNSAGAW VTARDEPGTL VVHVGDALEI LSNGRYTSVL
301: HRGLVNRRTV RISWVVFAEP PPDSVRLRPL PELLVNGAEP RFEPRTFRQH LENKVLKKKD
101: AGMGFFGMPI ADKEAYANNP AAGILEGYGS RLAGSAGEDG KREWEDYLFH QLHPDARADH ARWPAHPPEY VPVTKSFGER VSELAARLLA ILSLGLGVPA
201: PTLERRLRLS DEEVAVEDDL LLKMKINYYP PCPQPELAVG VEAHTDVSAL SFILTNGVPG LQVLNSAGAW VTARDEPGTL VVHVGDALEI LSNGRYTSVL
301: HRGLVNRRTV RISWVVFAEP PPDSVRLRPL PELLVNGAEP RFEPRTFRQH LENKVLKKKD
001: MVAVERVESL AKSGIISIPK EYIRPKEELE SINDVFLEEK KEDGPQVPTI DLKNIESDDE KIRENCIEEL KKASLDWGVM HLINHGIPAD LMERVKKAGE
101: EFFSLSVEEK EKYANDQATG KIQGYGSKLA NNASGQLEWE DYFFHLAYPE EKRDLSIWPK TPSDYIEATS EYAKCLRLLA TKVFKALSVG LGLEPDRLEK
201: EVGGLEELLL QMKINYYPKC PQPELALGVE AHTDVSALTF ILHNMVPGLQ LFYEGKWVTA KCVPDSIVMH IGDTLEILSN GKYKSILHRG LVNKEKVRIS
301: WAVFCEPPKD KIVLKPLPEM VSVESPAKFP PRTFAQHIEH KLFGKEQEEL VSEKND
101: EFFSLSVEEK EKYANDQATG KIQGYGSKLA NNASGQLEWE DYFFHLAYPE EKRDLSIWPK TPSDYIEATS EYAKCLRLLA TKVFKALSVG LGLEPDRLEK
201: EVGGLEELLL QMKINYYPKC PQPELALGVE AHTDVSALTF ILHNMVPGLQ LFYEGKWVTA KCVPDSIVMH IGDTLEILSN GKYKSILHRG LVNKEKVRIS
301: WAVFCEPPKD KIVLKPLPEM VSVESPAKFP PRTFAQHIEH KLFGKEQEEL VSEKND
Arabidopsis Description
LDOXAT4G22880 protein [Source:UniProtKB/TrEMBL;Acc:Q0WWD6]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.