Factsheet for TraesCS4B01G003300.1

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 6
peroxisome 1
cytosol 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS4A01G311000.1	Wheat	cytosol	91.21	95.41
TraesCS4D01G002800.1	Wheat	cytosol, plastid	93.54	92.58
HORVU4Hr1G000050.3	Barley	plastid	87.08	83.42
EER96378	Sorghum	cytosol	64.86	63.71
Os09t0570800-01	Rice	cytosol	58.14	60.16
TraesCS7B01G180300.1	Wheat	cytosol, endoplasmic reticulum, extracellular, golgi, peroxisome, plasma membrane, plastid, vacuole	59.95	57.43
AT2G36690.1	Thale cress	cytosol, nucleus, peroxisome	49.61	52.46
GSMUA_Achr9P23620_001	Banana	cytosol	50.39	51.59
PGSC0003DMT400070302	Potato	cytosol	48.32	50.68
Bra017227.1-P	Field mustard	cytosol	47.8	50.41
GSMUA_AchrUn_...	Banana	cytosol, nucleus, peroxisome	49.61	50.39
CDX75020	Canola	cytosol	47.55	50.0
Solyc11g007890.1.1	Tomato	cytosol	48.32	50.0
KRH67790	Soybean	cytosol	47.29	50.0
VIT_08s0007g04540.t01	Wine grape	cytosol	48.32	49.6
KRG96078	Soybean	cytosol	47.29	48.8
KRH19976	Soybean	cytosol	47.8	48.56
KRH32602	Soybean	cytosol	47.8	48.43
VIT_00s0250g00090.t01	Wine grape	cytosol	46.77	48.4
Solyc09g008560.2.1	Tomato	cytosol	47.03	48.15
GSMUA_Achr4P04450_001	Banana	cytosol, mitochondrion	40.31	48.0
PGSC0003DMT400009900	Potato	cytosol	47.29	47.91
KRH07794	Soybean	cytosol	37.73	46.35
TraesCS2B01G568800.1	Wheat	cytosol, nucleus, peroxisome	32.04	37.8
TraesCS4B01G346900.1	Wheat	cytosol	32.82	37.8
TraesCS2B01G514200.1	Wheat	cytosol, nucleus, peroxisome	31.27	37.0
TraesCS2B01G413000.1	Wheat	cytosol, nucleus, peroxisome	32.3	36.76
TraesCS2B01G568900.1	Wheat	mitochondrion, plastid	30.75	35.42
TraesCS2B01G412900.1	Wheat	plastid	31.52	34.96
TraesCS3B01G479500.1	Wheat	cytosol	31.27	34.77
TraesCS7B01G063700.1	Wheat	plastid	29.97	34.73
TraesCS1B01G088600.1	Wheat	cytoskeleton, cytosol, peroxisome	31.27	33.8
TraesCS4B01G344900.1	Wheat	cytosol, plastid	26.87	33.66
TraesCS1B01G052600.1	Wheat	cytosol	29.97	33.53
TraesCS4B01G344800.1	Wheat	cytosol	27.91	33.33
TraesCS6B01G362100.1	Wheat	cytosol	28.42	32.93
TraesCS3B01G486500.1	Wheat	cytosol	29.46	32.66
TraesCS3B01G383900.1	Wheat	cytosol	31.27	32.44
TraesCS3B01G444500.1	Wheat	cytosol	28.68	32.36
TraesCS5B01G153100.1	Wheat	cytosol, nucleus, peroxisome	30.49	32.24
TraesCS4B01G328300.1	Wheat	cytosol	22.22	32.09
TraesCS4B01G195000.1	Wheat	cytosol	30.49	32.07
TraesCS6B01G318100.1	Wheat	plastid	28.17	31.78
TraesCS6B01G318000.1	Wheat	plastid	27.91	31.76
TraesCS6B01G317900.1	Wheat	cytosol	21.96	31.48
TraesCS6B01G044600.1	Wheat	cytosol	28.17	31.32
TraesCS7B01G020000.1	Wheat	plastid	27.65	30.92
TraesCS6B01G046800.1	Wheat	plastid	27.39	30.64
TraesCS6B01G048100.1	Wheat	plastid	26.1	30.33
TraesCS2B01G613300.1	Wheat	cytosol, mitochondrion, peroxisome, plastid	26.61	29.51
TraesCS5B01G053400.2	Wheat	cytosol	29.46	28.86
TraesCS3B01G351600.1	Wheat	cytosol	26.36	28.41
TraesCS6B01G047100.1	Wheat	extracellular, vacuole	25.32	28.16
TraesCS2B01G521500.1	Wheat	golgi	26.36	26.98
TraesCS2B01G613000.1	Wheat	cytosol, extracellular, peroxisome	24.55	26.39
TraesCS6B01G006200.1	Wheat	cytosol	24.81	21.82

Protein Annotations

EnsemblPlants:TraesCS4B01G003300.1	EnsemblPlantsGene:TraesCS4B01G003300	Gene3D:2.60.120.330	GO:GO:0003674	GO:GO:0003824	GO:GO:0008150
GO:GO:0008152	GO:GO:0016491	GO:GO:0055114	InterPro:DIOX_N	InterPro:IPNS-like	InterPro:IPR005123
InterPro:IPR027443	InterPro:Oxoglu/Fe-dep_dioxygenase	PANTHER:PTHR10209	PANTHER:PTHR10209:SF207	PFAM:PF03171	PFAM:PF14226
PFscan:PS51471	SEG:seg	SUPFAM:SSF51197	MapMan:11.6.3.3	:	:

Description

No Description!

Coordinates

chr4B:+:1851738..1855440

Molecular Weight (calculated)

42239.6 Da

IEP (calculated)

6.579

GRAVY (calculated)

-0.203

Length

387 amino acids

Sequence
(BLAST)

001: MAILAAAAET SSSSSHAGHS QQQQLASTTC KAPASSSSSS EEPNKGVRHL CERGVTALPP RYVLPPSDRP APPAAPRGIP VIDMARLRST APSERAAELA
101: RVDAACRDLG FFQAVNHGAG DKARAMLDVA ARFFALPFEE RAAHMSPDIR APVRYGTSFN QLNDGVLCWR DFLKLLCNPA RLDDVLPSWP HNPSDLREVM
201: SVYARANQGL FRELMKAALE AMGITGQGVL EELDCGTQMM MVNCFPACPE PELTLGMPPH SDYGFLTLLL QDQVNGLEVC QGDDDWLLVD PLPGALIVNV
301: GDHLEIFSNG RYKSVLHRVR VNSTQLRISV ASLHSLPPER VIGPAPELLA DGTQRRYMDT DLTTFLKYLA SSEGKHKTFL QSRRITT

Best Arabidopsis Sequence Match ( AT2G44800.1 )
(BLAST)

001: MEETKMSLLD DSFTSAMTLT NSGVPQVPDR YVLPPSQRPA LGSSLGTSET TLPVIDLSLL HQPFLRSLAI HEISMACKEF GFFQVINHGI PSSVVNDALD
101: AATQFFDLPV EEKMLLVSAN VHEPVRYGTS LNHSTDRVHY WRDFIKHYSH PLSKWIDMWP SNPPCYKDKV GKYAEATHLL HKQLIEAISE SLGLEKNYLQ
201: EEIEEGSQVM AVNCYPACPE PEMALGMPPH SDFSSLTILL QSSKGLQIMD CNKNWVCVPY IEGALIVQLG DQVEVMSNGI YKSVIHRVTV NKEVKRLSFA
301: SLHSLPLHKK ISPAPKLVNP NNAPAYGEFS FNDFLNYISS NDFIQERFID TIKKSSS

Arabidopsis Description

2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein [Source:UniProtKB/TrEMBL;Acc:F4IV21]
SUBAcon: [peroxisome,plastid,nucleus,cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.