Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 1
- peroxisome 1
- mitochondrion 1
- cytosol 2
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS6D01G004300.1 | Wheat | cytosol | 96.8 | 96.8 |
| HORVU5Hr1G094280.1 | Barley | cytosol, peroxisome | 81.74 | 92.75 |
| TraesCS6A01G041800.1 | Wheat | cytosol | 80.82 | 90.08 |
| Os06t0626700-00 | Rice | cytosol | 56.62 | 66.49 |
| Os01t0372500-00 | Rice | cytosol | 56.39 | 65.87 |
| Zm00001d014914_P001 | Maize | cytosol | 56.85 | 63.04 |
| EES04312 | Sorghum | cytosol | 56.39 | 61.9 |
| GSMUA_Achr5P04080_001 | Banana | cytosol, peroxisome, plastid | 42.24 | 51.39 |
| VIT_02s0025g04720.t01 | Wine grape | cytosol, peroxisome, plastid | 38.36 | 47.32 |
| KRH77456 | Soybean | cytosol | 37.21 | 46.31 |
| AT4G22880.2 | Thale cress | cytosol | 37.44 | 46.07 |
| Bra019350.1-P | Field mustard | cytosol | 37.44 | 45.94 |
| CDX94133 | Canola | cytosol | 36.99 | 45.25 |
| Bra013652.1-P | Field mustard | cytosol | 36.76 | 44.97 |
| CDY41286 | Canola | cytosol | 36.76 | 44.97 |
| KRH27988 | Soybean | cytosol | 36.07 | 44.89 |
| CDY10816 | Canola | cytosol | 36.53 | 44.69 |
| CDX98776 | Canola | cytosol | 37.44 | 41.73 |
| TraesCS6A01G331400.1 | Wheat | plastid | 31.28 | 41.02 |
| Solyc08g080040.2.1 | Tomato | cytosol | 38.58 | 40.43 |
| PGSC0003DMT400058554 | Potato | cytosol | 39.5 | 38.02 |
| TraesCS5A01G513700.1 | Wheat | cytosol, plastid | 28.54 | 37.2 |
| TraesCS1A01G070200.1 | Wheat | cytoskeleton, cytosol, peroxisome | 28.54 | 34.92 |
| TraesCS3A01G351400.2 | Wheat | cytosol | 27.85 | 32.19 |
| TraesCS4A01G109200.1 | Wheat | cytosol | 26.48 | 31.52 |
| TraesCS7A01G121400.1 | Wheat | cytosol, peroxisome, plastid | 23.97 | 30.35 |
| TraesCS5A01G154900.1 | Wheat | cytosol, nucleus, peroxisome | 25.34 | 30.33 |
| TraesCS2A01G395000.1 | Wheat | cytosol | 23.52 | 30.29 |
| TraesCS2A01G394900.1 | Wheat | plastid | 22.83 | 28.65 |
| TraesCS5A01G048400.1 | Wheat | cytosol | 22.15 | 28.53 |
| TraesCS5A01G515600.2 | Wheat | cytosol | 24.66 | 28.12 |
| TraesCS7A01G159200.1 | Wheat | plastid | 21.0 | 27.63 |
| TraesCS6A01G033300.1 | Wheat | plastid | 21.0 | 26.59 |
| TraesCS6A01G288300.1 | Wheat | plastid | 20.55 | 26.47 |
| TraesCS3A01G445000.1 | Wheat | cytosol | 20.32 | 25.43 |
| TraesCS4A01G311000.1 | Wheat | cytosol | 21.46 | 25.41 |
| TraesCS7A01G037700.1 | Wheat | cytosol | 15.98 | 25.36 |
| TraesCS2A01G493500.1 | Wheat | golgi | 21.69 | 25.2 |
| TraesCS2A01G487100.1 | Wheat | cytosol | 15.53 | 24.64 |
| TraesCS7A01G026100.1 | Wheat | cytosol | 17.58 | 24.6 |
| TraesCS6A01G055700.1 | Wheat | cytosol | 19.18 | 24.28 |
| TraesCS6A01G288400.1 | Wheat | cytosol | 19.63 | 24.09 |
| TraesCS6A01G030500.1 | Wheat | plastid | 16.21 | 23.99 |
| TraesCS2A01G538700.1 | Wheat | cytosol, mitochondrion, peroxisome, plastid | 17.58 | 23.62 |
| TraesCS6A01G034100.1 | Wheat | cytosol, peroxisome, plastid | 16.67 | 23.55 |
| TraesCS7A01G280900.1 | Wheat | cytosol, endoplasmic reticulum, extracellular, golgi, peroxisome, plasma membrane, plastid, vacuole | 21.92 | 23.53 |
| TraesCS3A01G315300.1 | Wheat | cytosol, peroxisome, plastid | 19.18 | 23.4 |
| TraesCS1A01G008400.1 | Wheat | mitochondrion | 17.35 | 23.31 |
| TraesCS6A01G031500.1 | Wheat | cytosol | 13.47 | 23.23 |
| TraesCS2A01G538600.1 | Wheat | cytosol | 16.67 | 22.26 |
Protein Annotations
| EnsemblPlants:TraesCS6A01G001500.1 | EnsemblPlantsGene:TraesCS6A01G001500 | Gene3D:2.60.120.330 | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0008150 |
| GO:GO:0008152 | GO:GO:0016491 | GO:GO:0055114 | InterPro:DIOX_N | InterPro:IPNS-like | InterPro:IPR005123 |
| InterPro:IPR027443 | InterPro:Oxoglu/Fe-dep_dioxygenase | PANTHER:PTHR10209 | PANTHER:PTHR10209:SF190 | PFAM:PF03171 | PFAM:PF14226 |
| PFscan:PS51471 | SEG:seg | SUPFAM:SSF51197 | MapMan:9.2.2.9.2 | : | : |
Description
No Description!
Coordinates
chr6A:+:786778..788094
Molecular Weight (calculated)
47579.2 Da
IEP (calculated)
4.524
GRAVY (calculated)
-0.316
Length
438 amino acids
Sequence
(BLAST)
(BLAST)
001: MARVEALSMS GATAIPAEYV RPQEERQGLG DAYDEAAASW SAAGSPRIPV VDVAAFDAAD PGSPSSLAVV DAVRAAAEGW GVMHVAGHGI PEDLIDALRG
101: AGTGFFRMPI EDKEAYANDP AAGRLEGYGS RLAGSAGEDG KREWEDYLFH MLHPDARADH ALWPAHPPEY VPVTKTFGEH VSALSSRLLA ILSLGLGVPA
201: DTLERRLRLT SGGETQEVED DLLLKLKINY YPRCPQPELA VGVEAHTDVS ALSFILTNGV PGLQVLLPGD GQTWVTARDE PGTLVVHVGD ALEILSNGRY
301: TSVLHRGLVN RQAVRVSWVV FAEPPPNSVL LRPLPELLVD ETPRFEPRTF RQHLERKVLK KTNDQQEEEV VKMPPVVAQE EEKEVIKKPP VAGEEEEKEE
401: ATEPLVAGEE EHKVVKKEQS EQEDAKMAPV AANLVEVN
101: AGTGFFRMPI EDKEAYANDP AAGRLEGYGS RLAGSAGEDG KREWEDYLFH MLHPDARADH ALWPAHPPEY VPVTKTFGEH VSALSSRLLA ILSLGLGVPA
201: DTLERRLRLT SGGETQEVED DLLLKLKINY YPRCPQPELA VGVEAHTDVS ALSFILTNGV PGLQVLLPGD GQTWVTARDE PGTLVVHVGD ALEILSNGRY
301: TSVLHRGLVN RQAVRVSWVV FAEPPPNSVL LRPLPELLVD ETPRFEPRTF RQHLERKVLK KTNDQQEEEV VKMPPVVAQE EEKEVIKKPP VAGEEEEKEE
401: ATEPLVAGEE EHKVVKKEQS EQEDAKMAPV AANLVEVN
001: MVAVERVESL AKSGIISIPK EYIRPKEELE SINDVFLEEK KEDGPQVPTI DLKNIESDDE KIRENCIEEL KKASLDWGVM HLINHGIPAD LMERVKKAGE
101: EFFSLSVEEK EKYANDQATG KIQGYGSKLA NNASGQLEWE DYFFHLAYPE EKRDLSIWPK TPSDYIEATS EYAKCLRLLA TKVFKALSVG LGLEPDRLEK
201: EVGGLEELLL QMKINYYPKC PQPELALGVE AHTDVSALTF ILHNMVPGLQ LFYEGKWVTA KCVPDSIVMH IGDTLEILSN GKYKSILHRG LVNKEKVRIS
301: WAVFCEPPKD KIVLKPLPEM VSVESPAKFP PRTFAQHIEH KLFGKEQEEL VSEKND
101: EFFSLSVEEK EKYANDQATG KIQGYGSKLA NNASGQLEWE DYFFHLAYPE EKRDLSIWPK TPSDYIEATS EYAKCLRLLA TKVFKALSVG LGLEPDRLEK
201: EVGGLEELLL QMKINYYPKC PQPELALGVE AHTDVSALTF ILHNMVPGLQ LFYEGKWVTA KCVPDSIVMH IGDTLEILSN GKYKSILHRG LVNKEKVRIS
301: WAVFCEPPKD KIVLKPLPEM VSVESPAKFP PRTFAQHIEH KLFGKEQEEL VSEKND
Arabidopsis Description
LDOXAT4G22880 protein [Source:UniProtKB/TrEMBL;Acc:Q0WWD6]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.