Subcellular Localization
min:
: max
Winner_takes_all: peroxisome, cytoskeleton, cytosol
Predictor Summary:
Predictor Summary:
- peroxisome 1
- mitochondrion 1
- cytoskeleton 1
- cytosol 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS1D01G072700.1 | Wheat | cytoskeleton, cytosol, peroxisome | 96.65 | 96.65 |
| TraesCS1B01G088600.1 | Wheat | cytoskeleton, cytosol, peroxisome | 95.53 | 95.53 |
| HORVU1Hr1G015050.7 | Barley | cytosol, peroxisome | 92.46 | 91.18 |
| EES18946 | Sorghum | cytosol | 80.17 | 78.42 |
| Zm00001d035462_P001 | Maize | cytosol | 79.33 | 74.35 |
| Os05t0127500-01 | Rice | cytosol | 73.46 | 71.47 |
| GSMUA_Achr6P15610_001 | Banana | cytosol | 63.69 | 64.77 |
| GSMUA_Achr7P15540_001 | Banana | cytosol | 62.85 | 63.56 |
| TraesCS4A01G109200.1 | Wheat | cytosol | 65.08 | 63.32 |
| PGSC0003DMT400049193 | Potato | cytosol, mitochondrion, peroxisome | 30.45 | 59.56 |
| Bra034168.1-P | Field mustard | cytosol | 47.49 | 58.82 |
| VIT_13s0067g01020.t01 | Wine grape | cytosol | 58.94 | 58.77 |
| KRH38051 | Soybean | cytosol, peroxisome | 31.84 | 58.76 |
| KRG97722 | Soybean | cytosol | 58.66 | 58.17 |
| KRH14938 | Soybean | cytosol | 58.66 | 58.17 |
| TraesCS3A01G351400.2 | Wheat | cytosol | 61.45 | 58.05 |
| KRH31155 | Soybean | cytosol | 58.1 | 57.62 |
| PGSC0003DMT400031149 | Potato | cytosol | 55.87 | 56.18 |
| VIT_08s0105g00380.t01 | Wine grape | cytosol | 56.15 | 56.15 |
| Solyc10g076660.1.1 | Tomato | cytosol | 56.98 | 55.89 |
| Solyc03g096050.2.1 | Tomato | cytosol | 55.59 | 55.74 |
| CDY04960 | Canola | cytosol | 57.54 | 55.38 |
| KRH73197 | Soybean | cytosol | 58.38 | 55.29 |
| KRH00254 | Soybean | plastid | 53.63 | 55.17 |
| Bra028752.1-P | Field mustard | cytosol | 57.26 | 55.11 |
| AT2G38240.1 | Thale cress | plastid | 54.19 | 54.96 |
| KRH65721 | Soybean | cytosol | 56.98 | 54.69 |
| TraesCS5A01G154900.1 | Wheat | cytosol, nucleus, peroxisome | 55.87 | 54.64 |
| PGSC0003DMT400049192 | Potato | cytosol | 55.87 | 54.64 |
| Bra000045.1-P | Field mustard | plastid | 53.63 | 54.39 |
| CDY07746 | Canola | plastid | 53.63 | 54.39 |
| CDY18399 | Canola | plastid | 53.63 | 54.24 |
| Bra017132.1-P | Field mustard | plastid | 53.63 | 54.24 |
| AT5G05600.1 | Thale cress | cytosol | 56.15 | 54.18 |
| CDY11329 | Canola | cytosol | 56.15 | 54.03 |
| Bra005860.1-P | Field mustard | cytosol | 56.15 | 54.03 |
| CDY14105 | Canola | cytosol, nucleus, peroxisome | 57.82 | 53.91 |
| CDY68873 | Canola | plastid | 53.07 | 53.82 |
| CDY14476 | Canola | plastid | 53.07 | 53.82 |
| CDX93319 | Canola | plastid | 53.07 | 53.82 |
| CDX80966 | Canola | cytosol | 55.59 | 53.49 |
| AT3G55970.1 | Thale cress | cytosol | 54.19 | 53.44 |
| CDY02966 | Canola | cytosol | 53.63 | 52.75 |
| Bra014716.1-P | Field mustard | cytosol | 53.91 | 52.73 |
| KRH49391 | Soybean | cytosol | 56.15 | 52.62 |
| CDX76068 | Canola | cytosol | 53.63 | 52.46 |
| PGSC0003DMT400028828 | Potato | cytosol | 51.4 | 51.11 |
| Solyc10g085190.1.1 | Tomato | cytosol | 50.84 | 50.42 |
| Solyc10g076670.1.1 | Tomato | cytosol | 30.17 | 48.43 |
| Bra034861.1-P | Field mustard | cytosol | 54.19 | 47.9 |
| CDY08545 | Canola | cytosol | 54.19 | 47.9 |
| CDY01001 | Canola | cytosol | 54.19 | 47.9 |
| AT3G11180.2 | Thale cress | cytosol | 53.91 | 47.89 |
| TraesCS7A01G121400.1 | Wheat | cytosol, peroxisome, plastid | 39.39 | 40.75 |
| TraesCS5A01G513700.1 | Wheat | cytosol, plastid | 37.99 | 40.48 |
| TraesCS6A01G331400.1 | Wheat | plastid | 35.75 | 38.32 |
| CDX72185 | Canola | nucleus | 52.23 | 37.1 |
| TraesCS2A01G395000.1 | Wheat | cytosol | 34.36 | 36.18 |
| TraesCS7A01G159200.1 | Wheat | plastid | 32.4 | 34.83 |
| TraesCS6A01G288300.1 | Wheat | plastid | 32.68 | 34.41 |
| TraesCS2A01G394900.1 | Wheat | plastid | 32.68 | 33.52 |
| TraesCS6A01G041800.1 | Wheat | cytosol | 36.31 | 33.08 |
| TraesCS5A01G515600.2 | Wheat | cytosol | 34.36 | 32.03 |
| TraesCS4A01G311000.1 | Wheat | cytosol | 32.96 | 31.89 |
| TraesCS3A01G445000.1 | Wheat | cytosol | 31.01 | 31.71 |
| TraesCS6A01G033300.1 | Wheat | plastid | 30.45 | 31.5 |
| TraesCS7A01G280900.1 | Wheat | cytosol, endoplasmic reticulum, extracellular, golgi, peroxisome, plasma membrane, plastid, vacuole | 35.75 | 31.37 |
| TraesCS6A01G288400.1 | Wheat | cytosol | 31.01 | 31.09 |
| TraesCS6A01G055700.1 | Wheat | cytosol | 29.33 | 30.35 |
| Bra007204.1-P | Field mustard | cytosol | 52.51 | 30.27 |
| CDY27251 | Canola | nucleus | 51.96 | 29.95 |
| TraesCS7A01G037700.1 | Wheat | cytosol | 22.91 | 29.71 |
| TraesCS2A01G493500.1 | Wheat | golgi | 31.01 | 29.44 |
| TraesCS7A01G026100.1 | Wheat | cytosol | 25.7 | 29.39 |
| TraesCS2A01G487100.1 | Wheat | cytosol | 22.63 | 29.35 |
| TraesCS6A01G034100.1 | Wheat | cytosol, peroxisome, plastid | 24.86 | 28.71 |
| TraesCS6A01G001500.1 | Wheat | cytosol | 34.92 | 28.54 |
| TraesCS2A01G538700.1 | Wheat | cytosol, mitochondrion, peroxisome, plastid | 25.98 | 28.53 |
| TraesCS2A01G538600.1 | Wheat | cytosol | 24.58 | 26.83 |
| TraesCS5A01G048400.1 | Wheat | cytosol | 25.42 | 26.76 |
| TraesCS1A01G008400.1 | Wheat | mitochondrion | 24.02 | 26.38 |
| TraesCS6A01G031500.1 | Wheat | cytosol | 18.72 | 26.38 |
| TraesCS6A01G030500.1 | Wheat | plastid | 20.39 | 24.66 |
| TraesCS3A01G315300.1 | Wheat | cytosol, peroxisome, plastid | 23.46 | 23.4 |
Protein Annotations
| EnsemblPlants:TraesCS1A01G070200.1 | EnsemblPlantsGene:TraesCS1A01G070200 | Gene3D:2.60.120.330 | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0008150 |
| GO:GO:0008152 | GO:GO:0016491 | GO:GO:0055114 | InterPro:DIOX_N | InterPro:IPNS-like | InterPro:IPR005123 |
| InterPro:IPR027443 | InterPro:Oxoglu/Fe-dep_dioxygenase | PANTHER:PTHR10209 | PANTHER:PTHR10209:SF92 | PFAM:PF03171 | PFAM:PF14226 |
| PFscan:PS51471 | PRINTS:PR00682 | SEG:seg | SUPFAM:SSF51197 | MapMan:50.1.13 | : |
Description
No Description!
Coordinates
chr1A:+:53022427..53026803
Molecular Weight (calculated)
39183.2 Da
IEP (calculated)
6.410
GRAVY (calculated)
-0.392
Length
358 amino acids
Sequence
(BLAST)
(BLAST)
001: MEAAGWPEPV VRVQSLSESG AATIPDRYVK PAHDRPSVND GTTSGSVSIP VVDLSSPDGS AATARAVSEA CREWGFFQAV NHGVPRDPLR RARAAWRGFF
101: RLPVEAKQRY ANSPATYEGY GSRLGVERGA VLDWGDYYFL HLRPPGSLSA ADKWPHLPPD LRDATEEYGR EVASLCERLM AAMSAGLGVN PGRLQEEFGG
201: AEGAGVCVRV NYYPRCPQPE LTLGLSSHSD PGGMTVLLAD ERVRGLQVRG RGGEWVTVDP IADAFIVNVG DQIQVLTNTT YRSVEHRVMV NADAERLSVA
301: MFYNPRSDLP LAPMAELVSP GTPALYKPMT FDEYRLYIRR NGPRGKSQVE SLKAHEDR
101: RLPVEAKQRY ANSPATYEGY GSRLGVERGA VLDWGDYYFL HLRPPGSLSA ADKWPHLPPD LRDATEEYGR EVASLCERLM AAMSAGLGVN PGRLQEEFGG
201: AEGAGVCVRV NYYPRCPQPE LTLGLSSHSD PGGMTVLLAD ERVRGLQVRG RGGEWVTVDP IADAFIVNVG DQIQVLTNTT YRSVEHRVMV NADAERLSVA
301: MFYNPRSDLP LAPMAELVSP GTPALYKPMT FDEYRLYIRR NGPRGKSQVE SLKAHEDR
001: MNNLDEIKIE SKTCLNDQEQ EVKIDNMHMS DQDKNKIEIK NKSGLGEKWP EPIVRVQSLA ESNLTSLPDR YIKPPSQRPQ TTIIDHQPEV ADINIPIIDL
101: DSLFSGNEDD KKRISEACRE WGFFQVINHG VKPELMDAAR ETWKSFFNLP VEAKEVYSNS PRTYEGYGSR LGVEKGAILD WNDYYYLHFL PLALKDFNKW
201: PSLPSNIREM NDEYGKELVK LGGRLMTILS SNLGLRAEQL QEAFGGEDVG ACLRVNYYPK CPQPELALGL SPHSDPGGMT ILLPDDQVVG LQVRHGDTWI
301: TVNPLRHAFI VNIGDQIQIL SNSKYKSVEH RVIVNSEKER VSLAFFYNPK SDIPIQPMQQ LVTSTMPPLY PPMTFDQYRL FIRTQGPRGK SHVESHISPR
101: DSLFSGNEDD KKRISEACRE WGFFQVINHG VKPELMDAAR ETWKSFFNLP VEAKEVYSNS PRTYEGYGSR LGVEKGAILD WNDYYYLHFL PLALKDFNKW
201: PSLPSNIREM NDEYGKELVK LGGRLMTILS SNLGLRAEQL QEAFGGEDVG ACLRVNYYPK CPQPELALGL SPHSDPGGMT ILLPDDQVVG LQVRHGDTWI
301: TVNPLRHAFI VNIGDQIQIL SNSKYKSVEH RVIVNSEKER VSLAFFYNPK SDIPIQPMQQ LVTSTMPPLY PPMTFDQYRL FIRTQGPRGK SHVESHISPR
Arabidopsis Description
2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein [Source:UniProtKB/TrEMBL;Acc:F4J670]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.