Subcellular Localization
min:
: max
Winner_takes_all: peroxisome, plastid, cytosol
Predictor Summary:
Predictor Summary:
- peroxisome 1
- mitochondrion 1
- plastid 1
- cytosol 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS3B01G351600.1 | Wheat | cytosol | 94.99 | 94.99 |
| HORVU3Hr1G077080.2 | Barley | cytosol, peroxisome, plastid | 90.81 | 90.81 |
| TraesCS3D01G316200.1 | Wheat | cytosol | 94.99 | 84.62 |
| TraesCS5A01G048400.1 | Wheat | cytosol | 60.45 | 63.82 |
| OQU80974 | Sorghum | cytosol, mitochondrion, peroxisome, plastid | 56.27 | 53.02 |
| GSMUA_Achr9P15020_001 | Banana | cytosol | 45.13 | 46.15 |
| VIT_18s0001g06690.t01 | Wine grape | cytosol | 36.49 | 38.99 |
| KRH53489 | Soybean | cytosol | 39.28 | 38.95 |
| Solyc01g105650.2.1 | Tomato | cytosol | 34.26 | 34.55 |
| TraesCS2A01G394900.1 | Wheat | plastid | 30.36 | 31.23 |
| PGSC0003DMT400083728 | Potato | cytosol | 14.48 | 31.14 |
| TraesCS2A01G395000.1 | Wheat | cytosol | 28.69 | 30.29 |
| TraesCS6A01G033300.1 | Wheat | plastid | 27.3 | 28.32 |
| TraesCS6A01G331400.1 | Wheat | plastid | 25.63 | 27.54 |
| TraesCS7A01G037700.1 | Wheat | cytosol | 21.17 | 27.54 |
| TraesCS5A01G513700.1 | Wheat | cytosol, plastid | 25.63 | 27.38 |
| TraesCS4A01G311000.1 | Wheat | cytosol | 28.13 | 27.3 |
| TraesCS2A01G487100.1 | Wheat | cytosol | 20.89 | 27.17 |
| TraesCS5A01G515600.2 | Wheat | cytosol | 28.69 | 26.82 |
| TraesCS6A01G031500.1 | Wheat | cytosol | 18.94 | 26.77 |
| TraesCS2A01G538700.1 | Wheat | cytosol, mitochondrion, peroxisome, plastid | 24.23 | 26.69 |
| TraesCS2A01G538600.1 | Wheat | cytosol | 23.96 | 26.22 |
| TraesCS6A01G288300.1 | Wheat | plastid | 24.79 | 26.18 |
| TraesCS3A01G351400.2 | Wheat | cytosol | 27.58 | 26.12 |
| TraesCS7A01G121400.1 | Wheat | cytosol, peroxisome, plastid | 25.07 | 26.01 |
| TraesCS6A01G055700.1 | Wheat | cytosol | 24.79 | 25.72 |
| TraesCS1A01G008400.1 | Wheat | mitochondrion | 22.84 | 25.15 |
| TraesCS7A01G280900.1 | Wheat | cytosol, endoplasmic reticulum, extracellular, golgi, peroxisome, plasma membrane, plastid, vacuole | 28.41 | 25.0 |
| TraesCS6A01G288400.1 | Wheat | cytosol | 24.79 | 24.93 |
| TraesCS7A01G159200.1 | Wheat | plastid | 23.12 | 24.92 |
| TraesCS6A01G034100.1 | Wheat | cytosol, peroxisome, plastid | 21.45 | 24.84 |
| TraesCS7A01G026100.1 | Wheat | cytosol | 21.45 | 24.6 |
| TraesCS3A01G445000.1 | Wheat | cytosol | 23.96 | 24.57 |
| TraesCS5A01G154900.1 | Wheat | cytosol, nucleus, peroxisome | 24.79 | 24.32 |
| TraesCS1A01G070200.1 | Wheat | cytoskeleton, cytosol, peroxisome | 23.4 | 23.46 |
| TraesCS4A01G109200.1 | Wheat | cytosol | 23.96 | 23.37 |
| TraesCS2A01G493500.1 | Wheat | golgi | 23.68 | 22.55 |
| TraesCS6A01G041800.1 | Wheat | cytosol | 23.68 | 21.63 |
| TraesCS6A01G030500.1 | Wheat | plastid | 17.55 | 21.28 |
| TraesCS6A01G001500.1 | Wheat | cytosol | 23.4 | 19.18 |
| Zm00001d042655_P001 | Maize | cytosol | 2.23 | 7.08 |
Protein Annotations
| EnsemblPlants:TraesCS3A01G315300.1 | EnsemblPlantsGene:TraesCS3A01G315300 | Gene3D:2.60.120.330 | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0008150 |
| GO:GO:0008152 | GO:GO:0016491 | GO:GO:0055114 | InterPro:DIOX_N | InterPro:IPNS-like | InterPro:IPR005123 |
| InterPro:IPR027443 | InterPro:Oxoglu/Fe-dep_dioxygenase | PANTHER:PTHR10209 | PANTHER:PTHR10209:SF369 | PFAM:PF03171 | PFAM:PF14226 |
| PFscan:PS51471 | SEG:seg | SUPFAM:SSF51197 | MapMan:50.1.13 | : | : |
Description
No Description!
Coordinates
chr3A:+:556454549..556456340
Molecular Weight (calculated)
39176.6 Da
IEP (calculated)
5.832
GRAVY (calculated)
-0.278
Length
359 amino acids
Sequence
(BLAST)
(BLAST)
001: MPTPSHRHCP NHPKGDHGDC AGACGGDGIP VIDLGVLLNG NAEERSQATH ELGQACEHWG FFMVINHGVP EALQEEVMEA CKELYSLPRD EKAEYIAAGP
101: KDPVRIGTGL FYSDVDDAIC RRDYVKMVAH PEFHCPAKPA RLRDIAVEYS ARTRQLLLEL AKVVSESLGL DRGRISEVLN LESCFQILVG NNYPPYAGSD
201: GVMGISAHSD HGLLTLLFQN GVDGLQVKHN GQWVTAKPLP GSLFILTGDQ LEIVSNGRYK AVLHRALVHG GQTRMSFVSL VGPCLDAVVE PVLELAQNDP
301: QGMKFRGIRY RDYMEHQQSS KMNTKAALDI VRVQGDILTC ESTTNNSTEA DSSGYSPTS
101: KDPVRIGTGL FYSDVDDAIC RRDYVKMVAH PEFHCPAKPA RLRDIAVEYS ARTRQLLLEL AKVVSESLGL DRGRISEVLN LESCFQILVG NNYPPYAGSD
201: GVMGISAHSD HGLLTLLFQN GVDGLQVKHN GQWVTAKPLP GSLFILTGDQ LEIVSNGRYK AVLHRALVHG GQTRMSFVSL VGPCLDAVVE PVLELAQNDP
301: QGMKFRGIRY RDYMEHQQSS KMNTKAALDI VRVQGDILTC ESTTNNSTEA DSSGYSPTS
001: MSPSMIAPVM EEENKKYQKG VKHLCENGLT KVPTKYIWPE PDRPILTKSD KLIKPNKNLK LPLIDFAELL GPNRPHVLRT IAEACKTYGF FQVVNHGMEG
101: DVSKNMIDVC KRFFELPYEE RSKYMSSDMS APVRYGTSFN QIKDNVFCWR DFLKLYAHPL PDYLPHWPSS PSDFRSSAAT YAKETKEMFE MMVKAILESL
201: EIDGSDEAAK ELEEGSQVVV VNCYPPCPEP ELTLGMPPHS DYGFLTLLLQ DEVEGLQILY RDEWVTVDPI PGSFVVNVGD HLEIFSNGRY KSVLHRVLVN
301: STKPRISVAS LHSFPLTSVV KPSPKLVDKH NPSQYMDTDF TTFLQYITSR EPKWKNFLES RKIHHV
101: DVSKNMIDVC KRFFELPYEE RSKYMSSDMS APVRYGTSFN QIKDNVFCWR DFLKLYAHPL PDYLPHWPSS PSDFRSSAAT YAKETKEMFE MMVKAILESL
201: EIDGSDEAAK ELEEGSQVVV VNCYPPCPEP ELTLGMPPHS DYGFLTLLLQ DEVEGLQILY RDEWVTVDPI PGSFVVNVGD HLEIFSNGRY KSVLHRVLVN
301: STKPRISVAS LHSFPLTSVV KPSPKLVDKH NPSQYMDTDF TTFLQYITSR EPKWKNFLES RKIHHV
Arabidopsis Description
2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein [Source:UniProtKB/TrEMBL;Acc:F4INZ9]
SUBAcon: [peroxisome,nucleus,cytosol]
SUBAcon: [peroxisome,nucleus,cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.