Factsheet for VIT_18s0001g06690.t01

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 4
peroxisome 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, peroxisome
BaCelLo:	cytosol
MultiLoc:	peroxisome
Plant-mPloc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH72414	Soybean	cytosol	59.82	59.12
KRH16797	Soybean	cytosol	58.04	57.35
KRH16798	Soybean	cytosol	58.04	57.35
VIT_03s0017g00620.t01	Wine grape	cytosol	53.87	51.42
VIT_03s0017g00710.t01	Wine grape	plastid	52.68	51.01
GSMUA_Achr9P15020_001	Banana	cytosol	50.3	48.15
Solyc01g105650.2.1	Tomato	cytosol	49.11	46.35
TraesCS5A01G048400.1	Wheat	cytosol	38.99	38.53
HORVU3Hr1G077080.2	Barley	cytosol, peroxisome, plastid	39.58	37.05
TraesCS3B01G351600.1	Wheat	cytosol	39.29	36.77
VIT_16s0013g00730.t01	Wine grape	cytosol	21.73	36.5
TraesCS3A01G315300.1	Wheat	cytosol, peroxisome, plastid	38.99	36.49
VIT_15s0048g02430.t01	Wine grape	cytosol	37.2	36.34
HORVU5Hr1G011540.3	Barley	cytosol	41.37	36.29
TraesCS5D01G058700.2	Wheat	cytosol	40.48	36.07
VIT_13s0047g00210.t01	Wine grape	cytosol	35.12	35.01
PGSC0003DMT400083728	Potato	cytosol	17.26	34.73
VIT_02s0025g02970.t01	Wine grape	cytosol	35.71	34.48
VIT_08s0007g04540.t01	Wine grape	cytosol	38.39	34.22
VIT_02s0025g02960.t01	Wine grape	cytosol	35.42	34.2
TraesCS5B01G053400.2	Wheat	cytosol	40.18	34.18
VIT_03s0017g00830.t01	Wine grape	plastid	55.06	34.13
VIT_16s0098g00860.t01	Wine grape	cytosol, peroxisome, plastid	34.23	34.02
VIT_00s0250g00090.t01	Wine grape	cytosol	37.5	33.69
TraesCS3D01G316200.1	Wheat	cytosol	39.29	32.75
VIT_16s0013g00740.t01	Wine grape	cytosol, nucleus, peroxisome, plastid	34.52	32.68
VIT_18s0001g03470.t01	Wine grape	cytosol	30.36	31.68
VIT_03s0017g02350.t01	Wine grape	cytosol	33.04	31.27
VIT_18s0001g03490.t01	Wine grape	cytosol	30.95	31.04
OQU80974	Sorghum	cytosol, mitochondrion, peroxisome, plastid	35.12	30.97
VIT_18s0001g03430.t01	Wine grape	cytosol	30.36	30.72
VIT_13s0067g01020.t01	Wine grape	cytosol	32.74	30.64
VIT_07s0005g03150.t01	Wine grape	cytosol, peroxisome, plastid	30.06	29.62
VIT_08s0105g00380.t01	Wine grape	cytosol	30.36	28.49
VIT_02s0025g04720.t01	Wine grape	cytosol, peroxisome, plastid	29.46	27.89
VIT_18s0001g14310.t01	Wine grape	cytosol	28.27	26.54
VIT_04s0023g03370.t01	Wine grape	cytosol	27.98	25.9
VIT_18s0001g03510.t01	Wine grape	cytosol	31.55	15.59
Zm00001d042655_P001	Maize	cytosol	1.49	4.42

Protein Annotations

EntrezGene:100264331	wikigene:100264331	Gene3D:2.60.120.330	MapMan:50.1.13	ProteinID:CBI19214	ProteinID:CBI19214.3
InterPro:DIOX_N	UniProt:E0CRR0	EMBL:FN595227	GO:GO:0003674	GO:GO:0003824	GO:GO:0005488
GO:GO:0008150	GO:GO:0008152	GO:GO:0016491	GO:GO:0046872	GO:GO:0055114	InterPro:IPNS-like
InterPro:IPR005123	InterPro:IPR027443	EntrezGene:LOC100264331	wikigene:LOC100264331	InterPro:Oxoglu/Fe-dep_dioxygenase	PFAM:PF03171
PFAM:PF14226	PFscan:PS51471	PANTHER:PTHR10209	PANTHER:PTHR10209:SF369	SUPFAM:SSF51197	UniParc:UPI0001BE1571
ArrayExpress:VIT_18s0001g06690	EnsemblPlantsGene:VIT_18s0001g06690	EnsemblPlants:VIT_18s0001g06690.t01	unigene:Vvi.5372	RefSeq:XP_002285730	RefSeq:XP_002285730.1

Description

No Description!

Coordinates

chr18:+:5029717..5032277

Molecular Weight (calculated)

37903.4 Da

IEP (calculated)

5.839

GRAVY (calculated)

-0.418

Length

336 amino acids

Sequence
(BLAST)

001: MGIKGLVESG YLNSIPPEYV FPSNLNDLEV EEVPTVDFSQ LTAGTPDERS KAIQVIGKAC REWGFFMVIN HSMPRRLMDE MLNVGERFFD LAEEEKQDHA
101: GKELFDPIRC GTGFNNGLGN VFLWRDYLKV HVHPHFHAPH KPADFRETSE EYCKKARDVA EELLKGISKS LGQEENYIHK KMDVESGSQL LVMNLYPPCP
201: RPELVMGMPP HSDHGILTLL MQNDVCGLQI LHNGKWVPVN PPPYSFLVNT GDHMEILTNG RYESVVHQVV VNSNATRMTI ATGHGPPLGA IISPAAELVD
301: SENHPPKYQG MKYRDYIELQ QTNQLEGKSC LDRVRI

Best Arabidopsis Sequence Match ( AT2G36690.2 )
(BLAST)

001: MSPSMIAPVM EEENKKYQKG VKHLCENGLT KVPTKYIWPE PDRPILTKSD KLIKPNKNLK LPLIDFAELL GPNRPHVLRT IAEACKTYGF FQVVNHGMEG
101: DVSKNMIDVC KRFFELPYEE RSKYMSSDMS APVRYGTSFN QIKDNVFCWR DFLKLYAHPL PDYLPHWPSS PSDFRSSAAT YAKETKEMFE MMVKAILESL
201: EIDGSDEAAK ELEEGSQVVV VNCYPPCPEP ELTLGMPPHS DYGFLTLLLQ DEVEGLQILY RDEWVTVDPI PGSFVVNVGD HLEIFSNGRY KSVLHRVLVN
301: STKPRISVAS LHSFPLTSVV KPSPKLVDKH NPSQYMDTDF TTFLQYITSR EPKWKNFLES RKIHHV

Arabidopsis Description

2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein [Source:UniProtKB/TrEMBL;Acc:F4INZ9]
SUBAcon: [peroxisome,nucleus,cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.