Factsheet for VIT_18s0001g03430.t01

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 4
plastid 1
peroxisome 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH57850	Soybean	cytosol	75.3	75.53
VIT_18s0001g03470.t01	Wine grape	cytosol	50.0	51.55
VIT_18s0001g03490.t01	Wine grape	cytosol	51.81	51.34
VIT_02s0025g04720.t01	Wine grape	cytosol, peroxisome, plastid	45.78	42.82
VIT_13s0067g01020.t01	Wine grape	cytosol	40.06	37.05
VIT_16s0013g00730.t01	Wine grape	cytosol	22.29	37.0
VIT_16s0098g00860.t01	Wine grape	cytosol, peroxisome, plastid	37.35	36.69
VIT_08s0105g00380.t01	Wine grape	cytosol	39.16	36.31
VIT_13s0047g00210.t01	Wine grape	cytosol	36.45	35.91
VIT_15s0048g02430.t01	Wine grape	cytosol	36.14	34.88
VIT_03s0017g02350.t01	Wine grape	cytosol	36.75	34.37
VIT_02s0025g02970.t01	Wine grape	cytosol	34.34	32.76
VIT_02s0025g02960.t01	Wine grape	cytosol	34.04	32.47
VIT_07s0005g03150.t01	Wine grape	cytosol, peroxisome, plastid	32.23	31.38
VIT_18s0001g14310.t01	Wine grape	cytosol	33.73	31.28
VIT_08s0007g04540.t01	Wine grape	cytosol	34.94	30.77
VIT_04s0023g03370.t01	Wine grape	cytosol	33.43	30.58
VIT_18s0001g06690.t01	Wine grape	cytosol	30.72	30.36
VIT_16s0013g00740.t01	Wine grape	cytosol, nucleus, peroxisome, plastid	32.23	30.14
VIT_00s0250g00090.t01	Wine grape	cytosol	33.73	29.95
VIT_03s0017g00620.t01	Wine grape	cytosol	30.72	28.98
VIT_03s0017g00710.t01	Wine grape	plastid	28.92	27.67
VIT_18s0001g03510.t01	Wine grape	cytosol	53.01	25.88
VIT_03s0017g00830.t01	Wine grape	plastid	31.02	19.0

Protein Annotations

EntrezGene:100267819	wikigene:100267819	Gene3D:2.60.120.330	MapMan:9.2.2.5.1	EMBL:AB213566	EMBL:AM472190
ProteinID:BAE75810	ProteinID:BAE75810.1	ProteinID:CAN72728	ProteinID:CAN72728.1	ProteinID:CBI19053	ProteinID:CBI19053.3
InterPro:DIOX_N	UniProt:E0CR99	EMBL:FN595227	GO:GO:0003674	GO:GO:0003824	GO:GO:0005488
GO:GO:0008150	GO:GO:0008152	GO:GO:0009058	GO:GO:0016491	GO:GO:0045431	GO:GO:0046872
GO:GO:0051555	GO:GO:0055114	InterPro:IPNS-like	InterPro:IPR005123	InterPro:IPR027443	EntrezGene:LOC100267819
wikigene:LOC100267819	InterPro:Oxoglu/Fe-dep_dioxygenase	PFAM:PF03171	PFAM:PF14226	PFscan:PS51471	PANTHER:PTHR10209
PANTHER:PTHR10209:SF382	SUPFAM:SSF51197	TIGR:TC59043	TIGR:TC66577	UniParc:UPI00015C777E	ArrayExpress:VIT_18s0001g03430
EnsemblPlantsGene:VIT_18s0001g03430	EnsemblPlants:VIT_18s0001g03430.t01	unigene:Vvi.3105	RefSeq:XP_002285841	RefSeq:XP_002285841.1	SEG:seg

Description

No Description!

Coordinates

chr18:-:3309917..3311940

Molecular Weight (calculated)

37660.1 Da

IEP (calculated)

5.168

GRAVY (calculated)

-0.422

Length

332 amino acids

Sequence
(BLAST)

001: MEVERVQALA SGADLNELPA KFIRPAHERP ENTKPLEGVS VPVISLAESH DVLVKEIYKA CSEWGFFLLK DHGISPGLIE KLQEVGIEFF KQPQEEKEKY
101: ANDPSTGKFE GYGTKMTKNL DEKVEWVDYF FHLMSPPSNV NHQIWPQTPS SYREVTEVYN KELLKVTDTL LELLSEGLGL EGKVLKSHVG GDEIELEMKI
201: NMYPPCPQPQ LALGVEPHTD MSALTLLVPN DVPGLQVWKD DNWVVVDYLP NALFVHVGDQ IEVLSNGKYK SVLHRSTVDK ERTRMSWAVF CAPPHKAMIG
301: PLPELVDEPN PAKYSTKTFA EYRYRKFNKL PQ

Best Arabidopsis Sequence Match ( AT5G08640.1 )
(BLAST)

001: MEVERVQDIS SSSLLTEAIP LEFIRSEKEQ PAITTFRGPT PAIPVVDLSD PDEESVRRAV VKASEEWGLF QVVNHGIPTE LIRRLQDVGR KFFELPSSEK
101: ESVAKPEDSK DIEGYGTKLQ KDPEGKKAWV DHLFHRIWPP SCVNYRFWPK NPPEYREVNE EYAVHVKKLS ETLLGILSDG LGLKRDALKE GLGGEMAEYM
201: MKINYYPPCP RPDLALGVPA HTDLSGITLL VPNEVPGLQV FKDDHWFDAE YIPSAVIVHI GDQILRLSNG RYKNVLHRTT VDKEKTRMSW PVFLEPPREK
301: IVGPLPELTG DDNPPKFKPF AFKDYSYRKL NKLPLD

Arabidopsis Description

FLS1Flavonol synthase/flavanone 3-hydroxylase [Source:UniProtKB/Swiss-Prot;Acc:Q96330]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.