Factsheet for VIT_03s0017g00830.t01

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 7
peroxisome 1
cytosol 3

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
VIT_03s0017g00710.t01	Wine grape	plastid	63.1	98.56
VIT_03s0017g00620.t01	Wine grape	cytosol	47.97	73.86
VIT_18s0001g06690.t01	Wine grape	cytosol	34.13	55.06
PGSC0003DMT400083733	Potato	cytosol	36.35	54.72
Solyc08g006770.2.1	Tomato	plastid	35.06	54.13
Solyc01g105660.2.1	Tomato	cytosol, plastid	35.61	54.06
PGSC0003DMT400067586	Potato	cytosol, peroxisome, plastid	35.06	53.82
VIT_16s0013g00730.t01	Wine grape	cytosol	14.58	39.5
VIT_15s0048g02430.t01	Wine grape	cytosol	23.99	37.79
VIT_16s0098g00860.t01	Wine grape	cytosol, peroxisome, plastid	22.51	36.09
VIT_13s0047g00210.t01	Wine grape	cytosol	22.32	35.91
VIT_02s0025g02970.t01	Wine grape	cytosol	22.88	35.63
VIT_02s0025g02960.t01	Wine grape	cytosol	22.14	34.48
VIT_08s0007g04540.t01	Wine grape	cytosol	23.62	33.95
VIT_16s0013g00740.t01	Wine grape	cytosol, nucleus, peroxisome, plastid	22.14	33.8
VIT_00s0250g00090.t01	Wine grape	cytosol	23.25	33.69
VIT_13s0067g01020.t01	Wine grape	cytosol	21.77	32.87
VIT_18s0001g03470.t01	Wine grape	cytosol	18.82	31.68
VIT_08s0105g00380.t01	Wine grape	cytosol	20.66	31.28
VIT_18s0001g03430.t01	Wine grape	cytosol	19.0	31.02
VIT_03s0017g02350.t01	Wine grape	cytosol	20.11	30.7
VIT_18s0001g03490.t01	Wine grape	cytosol	18.82	30.45
VIT_02s0025g04720.t01	Wine grape	cytosol, peroxisome, plastid	19.0	29.01
VIT_07s0005g03150.t01	Wine grape	cytosol, peroxisome, plastid	17.71	28.15
VIT_18s0001g14310.t01	Wine grape	cytosol	17.34	26.26
VIT_04s0023g03370.t01	Wine grape	cytosol	17.53	26.17
VIT_18s0001g03510.t01	Wine grape	cytosol	19.37	15.44

Protein Annotations

EntrezGene:100246869	wikigene:100246869	EntrezGene:100253706	wikigene:100253706	Gene3D:2.60.120.330	MapMan:50.1.13
ProteinID:CCB57995	ProteinID:CCB57995.1	InterPro:DIOX_N	UniProt:F6HTI5	EMBL:FN596248	GO:GO:0003674
GO:GO:0003824	GO:GO:0008150	GO:GO:0008152	GO:GO:0016491	GO:GO:0055114	InterPro:IPNS-like
InterPro:IPR005123	InterPro:IPR027443	EntrezGene:LOC100246869	wikigene:LOC100246869	EntrezGene:LOC100253706	wikigene:LOC100253706
InterPro:Oxoglu/Fe-dep_dioxygenase	PFAM:PF03171	PFAM:PF14226	PFscan:PS51471	PANTHER:PTHR10209	PANTHER:PTHR10209:SF369
SUPFAM:SSF51197	TIGR:TC60351	UniParc:UPI0002108B95	ArrayExpress:VIT_03s0017g00830	EnsemblPlantsGene:VIT_03s0017g00830	EnsemblPlants:VIT_03s0017g00830.t01
unigene:Vvi.11387	RefSeq:XP_003631744	RefSeq:XP_003631744.1	:	:	:

Description

No Description!

Coordinates

chr3:+:15941013..15957334

Molecular Weight (calculated)

60546.0 Da

IEP (calculated)

6.459

GRAVY (calculated)

-0.201

Length

542 amino acids

Sequence
(BLAST)

001: MATATPNLLQ PPNFTCVKSL SESSALTSIP STYTFTTDPN QLLAFEPQHS IPIIDFSLLT SGDPDQRSRA IQDLDQACLE WGFFMLINHG VPESLMTGMI
101: EACRGFFDLT EEEKREFQGT HVLSPIRCGT SFNARVDQIL FWRDFLKVFV HPQFHSPSKP AGFSEVCLEY TQRMRKVAGE LLKGISKSLG LEEWYIDKTM
201: NMDSGLQILT VNLYPPCPQP EYAMGMPPHS DHSFLTILIQ NGIGGLQVQH KGQWFDVNPI PNSILVNTGD HLEVLSNGKY KSVLHRAVVN NKTTRISLAL
301: SNGPLLDTVV EPVPELSHPL KYVGMAYKEY LELQQGNKLD GKTCLDRVRI RTIEVCLEYT QSIRKVVGEL LRGISKSLGL EEWYIDKTMN MDSGLQILIA
401: NLYPPCPQPE YAMGLPPHSD HSFLTLLIQN GIGGLQVQHK GHWVDVNPIP NSILVNTGDH LEVLSNGKYK SILHRAVVNN KTTRISLAVS NGPSLDTVVE
501: PAPELSQPST YVGMTFKEYL ELQQGNKLDG KTCLDRVRIK TM

Best Arabidopsis Sequence Match ( AT2G36690.1 )
(BLAST)

001: MSPSMIAPVM EEENKKYQKG VKHLCENGLT KVPTKYIWPE PDRPILTKSD KLIKPNKNLK LPLIDFAELL GPNRPHVLRT IAEACKTYGF FQVVNHGMEG
101: DVSKNMIDVC KRFFELPYEE RSKYMSSDMS APVRYGTSFN QIKDNVFCWR DFLKLYAHPL PDYLPHWPSS PSDFRSSAAT YAKETKEMFE MMVKAILESL
201: EIDGSDEAAK ELEEGSQVVV VNCYPPCPEP ELTLGMPPHS DYGFLTLLLQ DEVEGLQILY RDEWVTVDPI PGSFVVNVGD HLEIFSNGRY KSVLHRVLVN
301: STKPRISVAS LHSFPLTSVV KPSPKLVDKH NPSQYMDTDF TTFLQYITSR EPKWKNFLES RKIHHV

Arabidopsis Description

2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein [Source:UniProtKB/TrEMBL;Acc:F4INZ9]
SUBAcon: [peroxisome,nucleus,cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.