Factsheet for VIT_04s0023g03370.t01

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 5
peroxisome 1
mitochondrion 1
plastid 1

Predictors

GFP

MS/MS

Papers

PPI

Inferred distinct locusB in Crop

locusB	locations
VIT_18s0001g03470.t01
VIT_18s0001g03490.t01
VIT_18s0001g03510.t01

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT3G51240.1	VIT_18s0001g03470.t01	AT5G08640.1	18467451
AT3G51240.1	VIT_18s0001g03490.t01	AT5G08640.1	18467451
AT3G51240.1	VIT_18s0001g03510.t01	AT5G08640.1	18467451

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
VIT_18s0001g14310.t01	Wine grape	cytosol	88.43	89.66
PGSC0003DMT400009175	Potato	cytosol	84.85	85.56
CDX77983	Canola	cytosol	83.75	84.92
AT3G51240.1	Thale cress	cytosol	83.47	84.64
Bra036828.1-P	Field mustard	cytosol	83.47	84.64
Solyc02g083860.2.1	Tomato	cytosol	84.3	84.53
CDX73739	Canola	cytosol	83.2	84.36
CDX90656	Canola	cytosol	80.44	83.43
CDY29008	Canola	cytosol	79.06	82.0
Bra012862.1-P	Field mustard	cytosol	78.79	81.71
GSMUA_Achr2P02770_001	Banana	cytosol	82.09	80.11
KRH76658	Soybean	cytosol	79.34	78.9
GSMUA_Achr7P16780_001	Banana	cytosol	80.99	78.82
Zm00001d001960_P001	Maize	plastid	75.21	74.59
EES13031	Sorghum	cytosol	75.76	73.53
TraesCS2B01G613300.1	Wheat	cytosol, mitochondrion, peroxisome, plastid	69.42	72.21
TraesCS2B01G521500.1	Wheat	golgi	74.38	71.43
TraesCS2A01G493500.1	Wheat	golgi	73.83	71.09
TraesCS2D01G493400.1	Wheat	golgi, nucleus	73.55	70.63
KXG27349	Sorghum	plastid	76.03	64.04
Bra014831.1-P	Field mustard	cytosol	55.92	63.04
CDX76159	Canola	cytoskeleton, cytosol, peroxisome	50.14	62.12
CDX76765	Canola	cytosol	40.5	61.76
HORVU2Hr1G110130.3	Barley	mitochondrion	72.73	59.46
Os04t0662600-00	Rice	mitochondrion, peroxisome	59.5	53.2
VIT_16s0098g00860.t01	Wine grape	cytosol, peroxisome, plastid	33.88	36.39
VIT_13s0047g00210.t01	Wine grape	cytosol	33.33	35.91
VIT_13s0067g01020.t01	Wine grape	cytosol	35.26	35.65
VIT_02s0025g02970.t01	Wine grape	cytosol	34.16	35.63
VIT_02s0025g02960.t01	Wine grape	cytosol	33.61	35.06
VIT_15s0048g02430.t01	Wine grape	cytosol	32.51	34.3
VIT_03s0017g02350.t01	Wine grape	cytosol	33.33	34.08
VIT_18s0001g03430.t01	Wine grape	cytosol	30.58	33.43
VIT_08s0105g00380.t01	Wine grape	cytosol	32.78	33.24
VIT_18s0001g03470.t01	Wine grape	cytosol	28.65	32.3
VIT_16s0013g00730.t01	Wine grape	cytosol	17.63	32.0
VIT_07s0005g03150.t01	Wine grape	cytosol, peroxisome, plastid	28.93	30.79
VIT_08s0007g04540.t01	Wine grape	cytosol	31.68	30.5
VIT_18s0001g03490.t01	Wine grape	cytosol	27.82	30.15
VIT_00s0250g00090.t01	Wine grape	cytosol	30.85	29.95
VIT_02s0025g04720.t01	Wine grape	cytosol, peroxisome, plastid	28.37	29.01
VIT_03s0017g00620.t01	Wine grape	cytosol	28.1	28.98
Os08t0480200-01	Rice	cytosol	26.45	28.49
VIT_18s0001g06690.t01	Wine grape	cytosol	25.9	27.98
VIT_16s0013g00740.t01	Wine grape	cytosol, nucleus, peroxisome, plastid	26.72	27.32
VIT_03s0017g00710.t01	Wine grape	plastid	24.24	25.36
VIT_03s0017g00830.t01	Wine grape	plastid	26.17	17.53
VIT_18s0001g03510.t01	Wine grape	cytosol	28.1	15.0
Os08t0480100-01	Rice	cytosol, endoplasmic reticulum, plastid	0.83	0.48

Protein Annotations

EntrezGene:100233079	wikigene:100233079	Gene3D:2.60.120.330	MapMan:9.2.2.4.3	UniProt:A2ICC8	ProteinID:ABM67589
ProteinID:ABM67589.1	ProteinID:ADP07935	ProteinID:ADP07935.1	EMBL:AM466614	EMBL:AM477026	ProteinID:CAA53579
ProteinID:CAA53579.1	ProteinID:CAN61951	ProteinID:CAN61951.1	ProteinID:CAN68166	ProteinID:CAN68166.1	ProteinID:CCB44363
ProteinID:CCB44363.1	ncoils:Coil	InterPro:DIOX_N	EMBL:EF192467	EntrezGene:F3H	wikigene:F3H
EMBL:FN594959	GO:GO:0003674	GO:GO:0003824	GO:GO:0005488	GO:GO:0008150	GO:GO:0008152
GO:GO:0009058	GO:GO:0009416	GO:GO:0009628	GO:GO:0009813	GO:GO:0016491	GO:GO:0030246
GO:GO:0031418	GO:GO:0045486	GO:GO:0046872	GO:GO:0051213	GO:GO:0055114	EMBL:GU585858
InterPro:IPNS-like	InterPro:IPR005123	InterPro:IPR027443	RefSeq:NP_001268034.1	InterPro:Oxoglu/Fe-dep_dioxygenase	PFAM:PF03171
PFAM:PF14226	PFscan:PS51471	PANTHER:PTHR10209	PANTHER:PTHR10209:SF137	SUPFAM:SSF51197	TIGR:TC56795
TIGR:TC70298	UniParc:UPI0000EE1DCF	ArrayExpress:VIT_04s0023g03370	EnsemblPlantsGene:VIT_04s0023g03370	EnsemblPlants:VIT_04s0023g03370.t01	unigene:Vvi.128
EMBL:X75965	SEG:seg	:	:	:	:

Description

Flavanone 3-hydroxylase [Source:UniProtKB/TrEMBL;Acc:A2ICC8]

Coordinates

chr4:+:19929619..19931349

Molecular Weight (calculated)

40815.6 Da

IEP (calculated)

5.211

GRAVY (calculated)

-0.444

Length

363 amino acids

Sequence
(BLAST)

001: MAPTTLTALA GEKTLQSSFV RDEDERPKVA YNDFSNEIPV ISLEGIDEVG GRRDEICRKI VEACEDWGIF QVVNHGVDSN LISEMTRLAR EFFALPPEEK
101: LRFDMSGGKK GGFIVSSHLQ GEAVQDWREI VTYFSYPLRT RDYSRWPDKP EGWRSVTQEY SEKLMGLACK LLEVLSEAMD LDKDALTNAC VDMDQKVVVN
201: FYPQCPQPDL TLGLKRHTDP GTITLLLQDQ VGGLQATRDG GKTWITVQPV EGAFVVNLGD HGHYLSNGRF KNADHQAVVN SNHSRLSIAT FQNPAPEATV
301: YPLKIREGEK AVLEGPITFA EMYRRKMSKD LELARLKKLA KEQQLQDVEK AKLESKPIDQ ILA

Best Arabidopsis Sequence Match ( AT3G51240.1 )
(BLAST)

001: MAPGTLTELA GESKLNSKFV RDEDERPKVA YNVFSDEIPV ISLAGIDDVD GKRGEICRQI VEACENWGIF QVVDHGVDTN LVADMTRLAR DFFALPPEDK
101: LRFDMSGGKK GGFIVSSHLQ GEAVQDWREI VTYFSYPVRN RDYSRWPDKP EGWVKVTEEY SERLMSLACK LLEVLSEAMG LEKESLTNAC VDMDQKIVVN
201: YYPKCPQPDL TLGLKRHTDP GTITLLLQDQ VGGLQATRDN GKTWITVQPV EGAFVVNLGD HGHFLSNGRF KNADHQAVVN SNSSRLSIAT FQNPAPDATV
301: YPLKVREGEK AILEEPITFA EMYKRKMGRD LELARLKKLA KEERDHKEVD KPVDQIFA

Arabidopsis Description

F3HNaringenin,2-oxoglutarate 3-dioxygenase [Source:UniProtKB/Swiss-Prot;Acc:Q9S818]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.