Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- cytosol 3
- peroxisome 1
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred from Arabidopsis experimental PPI
| Ath locusA | locusB | Ath locusB | Paper |
|---|---|---|---|
| AT3G51240.1 | CDX69931 | AT5G08640.1 | 18467451 |
| AT3G51240.1 | CDY21556 | AT5G08640.1 | 18467451 |
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDX90656 | Canola | cytosol | 96.57 | 96.57 |
| CDX73739 | Canola | cytosol | 91.71 | 89.66 |
| CDX77983 | Canola | cytosol | 91.71 | 89.66 |
| AT3G51240.1 | Thale cress | cytosol | 90.29 | 88.27 |
| VIT_04s0023g03370.t01 | Wine grape | cytosol | 82.0 | 79.06 |
| VIT_18s0001g14310.t01 | Wine grape | cytosol | 80.86 | 79.05 |
| Solyc02g083860.2.1 | Tomato | cytosol | 79.71 | 77.07 |
| PGSC0003DMT400009175 | Potato | cytosol | 79.14 | 76.94 |
| KRH69784 | Soybean | cytosol | 80.0 | 74.67 |
| KRH69787 | Soybean | nucleus | 79.43 | 73.94 |
| GSMUA_Achr2P02770_001 | Banana | cytosol | 78.57 | 73.92 |
| KRH08080 | Soybean | cytosol | 78.29 | 73.66 |
| GSMUA_Achr7P16780_001 | Banana | cytosol | 76.86 | 72.12 |
| Zm00001d001960_P001 | Maize | plastid | 73.71 | 70.49 |
| TraesCS2B01G613300.1 | Wheat | cytosol, mitochondrion, peroxisome, plastid | 70.29 | 70.49 |
| EES13031 | Sorghum | cytosol | 72.86 | 68.18 |
| TraesCS2B01G521500.1 | Wheat | golgi | 72.86 | 67.46 |
| TraesCS2A01G493500.1 | Wheat | golgi | 72.29 | 67.11 |
| TraesCS2D01G493400.1 | Wheat | golgi, nucleus | 72.0 | 66.67 |
| CDX76765 | Canola | cytosol | 43.14 | 63.45 |
| CDX76159 | Canola | cytoskeleton, cytosol, peroxisome | 52.86 | 63.14 |
| KXG27349 | Sorghum | plastid | 73.71 | 59.86 |
| HORVU2Hr1G110130.3 | Barley | mitochondrion | 70.86 | 55.86 |
| Os04t0662600-00 | Rice | mitochondrion, peroxisome | 56.29 | 48.52 |
| CDX99549 | Canola | vacuole | 23.14 | 38.03 |
| CDY05412 | Canola | mitochondrion | 33.71 | 34.6 |
| CDX86858 | Canola | cytosol | 33.43 | 34.51 |
| CDX80450 | Canola | mitochondrion | 33.43 | 34.31 |
| CDY05445 | Canola | plastid | 33.43 | 34.31 |
| CDX88109 | Canola | mitochondrion | 33.43 | 34.31 |
| CDX99548 | Canola | cytosol | 33.14 | 34.22 |
| CDX99550 | Canola | cytosol | 33.14 | 34.02 |
| CDY05103 | Canola | cytosol, nucleus, peroxisome | 34.0 | 33.9 |
| CDX90761 | Canola | plastid | 33.43 | 33.43 |
| CDY32234 | Canola | cytosol, nucleus, peroxisome | 32.0 | 32.75 |
| CDY34450 | Canola | cytosol | 32.0 | 32.75 |
| CDY18399 | Canola | plastid | 32.57 | 32.2 |
| CDY68873 | Canola | plastid | 31.71 | 31.44 |
| CDY07746 | Canola | plastid | 31.71 | 31.44 |
| CDX93319 | Canola | plastid | 31.71 | 31.44 |
| CDY21556 | Canola | cytoskeleton, cytosol, peroxisome | 29.71 | 30.95 |
| CDX69931 | Canola | cytoskeleton, cytosol, peroxisome | 29.71 | 30.95 |
| CDY14476 | Canola | plastid | 31.14 | 30.88 |
| CDX90759 | Canola | cytosol | 25.71 | 29.8 |
| CDX80966 | Canola | cytosol | 31.14 | 29.3 |
| CDX75020 | Canola | cytosol | 30.57 | 29.08 |
| CDY41286 | Canola | cytosol | 29.71 | 29.05 |
| CDY04960 | Canola | cytosol | 30.86 | 29.03 |
| CDY11329 | Canola | cytosol | 30.86 | 29.03 |
| CDX76068 | Canola | cytosol | 30.29 | 28.96 |
| CDY02966 | Canola | cytosol | 29.71 | 28.57 |
| CDY10816 | Canola | cytosol | 29.14 | 28.49 |
| CDY01001 | Canola | cytosol | 32.86 | 28.4 |
| CDY14105 | Canola | cytosol, nucleus, peroxisome | 31.14 | 28.39 |
| CDY69013 | Canola | cytosol | 24.57 | 28.01 |
| CDY08545 | Canola | cytosol | 32.29 | 27.9 |
| CDY48154 | Canola | cytosol | 24.0 | 27.54 |
| CDY39565 | Canola | cytosol | 24.0 | 27.54 |
| CDY41520 | Canola | cytosol | 19.43 | 27.53 |
| CDY41522 | Canola | cytosol | 23.14 | 27.27 |
| CDX94133 | Canola | cytosol | 27.71 | 27.09 |
| CDY30486 | Canola | cytosol, nucleus, peroxisome | 27.43 | 26.97 |
| CDX74687 | Canola | cytosol | 27.43 | 26.74 |
| CDY23457 | Canola | cytosol, nucleus, peroxisome | 26.86 | 26.4 |
| CDY56988 | Canola | peroxisome | 26.57 | 26.05 |
| CDY42687 | Canola | peroxisome | 26.57 | 25.98 |
| CDY39860 | Canola | cytosol | 22.86 | 25.89 |
| Os08t0480200-01 | Rice | cytosol | 24.86 | 25.82 |
| CDY31361 | Canola | cytosol | 22.57 | 25.48 |
| CDX98776 | Canola | cytosol | 28.29 | 25.19 |
| CDX81188 | Canola | cytosol | 22.86 | 25.0 |
| CDX97750 | Canola | cytosol | 15.14 | 23.98 |
| CDY41521 | Canola | cytosol, mitochondrion | 1.43 | 23.81 |
| CDX70044 | Canola | cytosol, nucleus, peroxisome | 22.29 | 21.61 |
| CDY65238 | Canola | cytosol, nucleus, peroxisome | 22.29 | 21.61 |
| CDX72185 | Canola | nucleus | 30.86 | 21.43 |
| CDY31363 | Canola | cytosol | 22.86 | 18.96 |
| CDY27251 | Canola | nucleus | 30.29 | 17.07 |
| Os08t0480100-01 | Rice | cytosol, endoplasmic reticulum, plastid | 0.57 | 0.32 |
Protein Annotations
| Gene3D:2.60.120.330 | MapMan:9.2.2.4.3 | GO:A0A078GWK9 | UniProt:A0A078GWK9 | EnsemblPlants:CDY29008 | ProteinID:CDY29008 |
| ProteinID:CDY29008.1 | InterPro:DIOX_N | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0005488 | GO:GO:0008150 |
| GO:GO:0008152 | GO:GO:0016491 | GO:GO:0046872 | GO:GO:0055114 | EnsemblPlantsGene:GSBRNA2T00041737001 | InterPro:IPNS-like |
| InterPro:IPR005123 | InterPro:IPR027443 | InterPro:Oxoglu/Fe-dep_dioxygenase | PFAM:PF03171 | PFAM:PF14226 | PFscan:PS51471 |
| PANTHER:PTHR10209 | PANTHER:PTHR10209:SF137 | SUPFAM:SSF51197 | UniParc:UPI0004EE3E70 | : | : |
Description
BnaC07g32140DBnaC07g32140D protein [Source:UniProtKB/TrEMBL;Acc:A0A078GWK9]
Coordinates
chrLK032229:+:161255..162644
Molecular Weight (calculated)
39087.6 Da
IEP (calculated)
5.511
GRAVY (calculated)
-0.426
Length
350 amino acids
Sequence
(BLAST)
(BLAST)
001: MAPATLTELA GESKLNSKFV RDEDERPKVA YNEFSNEIPV ISLAGIDHVG GKRGDICRQI VEACENWGVF QVVDHGVDTK LVADMTRLAS DFFSLPPEDK
101: IKFDMSGGKK GGFIVSSHLQ GEVVQDWREI VTYFSYPVRN RDYSRWPGKP EGWVKVTEEY SEKLMELACK LLEILSEAMG IEKEALTNAC VDMDQKIVVN
201: YYPKCPQPDL TLGLKRHTDP GTITLLLQDQ VGGLQATRDD GKTWITVQPV EGAFVVNLGD HGHYLSNGRF KNADHQAVVN SNSSRFSIAT FQNPAPEATV
301: YPLKVKEGEK PILEEPIAFA EMYKRKMGRD LELARLKKLT KEKQGGCEAS
101: IKFDMSGGKK GGFIVSSHLQ GEVVQDWREI VTYFSYPVRN RDYSRWPGKP EGWVKVTEEY SEKLMELACK LLEILSEAMG IEKEALTNAC VDMDQKIVVN
201: YYPKCPQPDL TLGLKRHTDP GTITLLLQDQ VGGLQATRDD GKTWITVQPV EGAFVVNLGD HGHYLSNGRF KNADHQAVVN SNSSRFSIAT FQNPAPEATV
301: YPLKVKEGEK PILEEPIAFA EMYKRKMGRD LELARLKKLT KEKQGGCEAS
001: MAPGTLTELA GESKLNSKFV RDEDERPKVA YNVFSDEIPV ISLAGIDDVD GKRGEICRQI VEACENWGIF QVVDHGVDTN LVADMTRLAR DFFALPPEDK
101: LRFDMSGGKK GGFIVSSHLQ GEAVQDWREI VTYFSYPVRN RDYSRWPDKP EGWVKVTEEY SERLMSLACK LLEVLSEAMG LEKESLTNAC VDMDQKIVVN
201: YYPKCPQPDL TLGLKRHTDP GTITLLLQDQ VGGLQATRDN GKTWITVQPV EGAFVVNLGD HGHFLSNGRF KNADHQAVVN SNSSRLSIAT FQNPAPDATV
301: YPLKVREGEK AILEEPITFA EMYKRKMGRD LELARLKKLA KEERDHKEVD KPVDQIFA
101: LRFDMSGGKK GGFIVSSHLQ GEAVQDWREI VTYFSYPVRN RDYSRWPDKP EGWVKVTEEY SERLMSLACK LLEVLSEAMG LEKESLTNAC VDMDQKIVVN
201: YYPKCPQPDL TLGLKRHTDP GTITLLLQDQ VGGLQATRDN GKTWITVQPV EGAFVVNLGD HGHFLSNGRF KNADHQAVVN SNSSRLSIAT FQNPAPDATV
301: YPLKVREGEK AILEEPITFA EMYKRKMGRD LELARLKKLA KEERDHKEVD KPVDQIFA
Arabidopsis Description
F3HNaringenin,2-oxoglutarate 3-dioxygenase [Source:UniProtKB/Swiss-Prot;Acc:Q9S818]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.