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Canola
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Canola
Subcellular Localization
min:
: max

 
Winner_takes_all: mitochondrion

Predictor Summary:
  • plastid 4
  • mitochondrion 2
  • cytosol 1
Predictors GFP MS/MS Papers
Winner Takes All:mitochondrion
Any Predictor:cytosol, mitochondrion, plastid
BaCelLo:plastid
iPSORT:plastid
MultiLoc:mitochondrion
Predotar:mitochondrion
PProwler:plastid
WoLF PSORT:plastid
YLoc:cytosol
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
CDX80450 Canola mitochondrion 98.83 98.83
AT5G24530.1 Thale cress mitochondrion 88.86 88.86
CDY05412 Canola mitochondrion 87.68 87.68
CDY05445 Canola plastid 87.39 87.39
Bra009771.1-P Field mustard mitochondrion 94.43 77.03
KRH64291 Soybean cytosol 69.79 70.41
KRH53636 Soybean cytosol 68.92 69.53
VIT_13s0047g00210.t01 Wine grape cytosol 68.33 69.14
VIT_16s0098g00860.t01 Wine grape cytosol, peroxisome, plastid 68.33 68.93
PGSC0003DMT400001570 Potato cytosol 65.98 66.77
Solyc03g080190.2.1 Tomato cytosol, peroxisome, plastid 65.4 66.17
PGSC0003DMT400069218 Potato cytosol 66.28 66.08
Solyc06g073080.2.1 Tomato plastid 61.58 65.62
GSMUA_Achr4P30130_001 Banana cytosol, nucleus, peroxisome 63.34 64.09
GSMUA_Achr2P10240_001 Banana cytosol, nucleus, peroxisome 63.34 63.72
GSMUA_Achr1P03620_001 Banana cytosol, nucleus, peroxisome 62.46 63.2
Os03t0122300-01 Rice cytosol 62.76 62.57
GSMUA_Achr8P12320_001 Banana cytosol, nucleus, peroxisome 62.46 62.46
EER94585 Sorghum cytosol 60.7 61.61
TraesCS4D01G341800.1 Wheat cytosol 60.7 61.61
HORVU4Hr1G084810.2 Barley cytosol, peroxisome, plastid 60.41 61.31
GSMUA_Achr1P00770_001 Banana cytosol 60.41 61.13
EER92960 Sorghum cytosol 60.12 61.01
KXG26978 Sorghum cytosol 61.29 60.93
Os04t0581000-01 Rice cytosol 60.7 60.88
GSMUA_Achr5P10230_001 Banana cytosol, nucleus, peroxisome 60.12 60.83
TraesCS4B01G346900.1 Wheat cytosol 59.82 60.71
TraesCS2A01G395000.1 Wheat cytosol 60.12 60.29
GSMUA_Achr5P12830_001 Banana cytosol 59.82 60.18
TraesCS2D01G392800.1 Wheat cytosol 59.82 60.0
GSMUA_Achr11P... Banana cytosol, nucleus, peroxisome 61.88 59.77
HORVU0Hr1G005300.1 Barley cytosol 59.53 59.71
Zm00001d029744_P001 Maize cytosol 58.06 58.93
TraesCS2B01G413000.1 Wheat cytosol, nucleus, peroxisome 58.65 58.82
Zm00001d027423_P002 Maize cytosol, nucleus, peroxisome 60.7 56.1
TraesCS5A01G515600.2 Wheat cytosol 61.0 54.17
CDX90761 Canola plastid 52.49 51.14
CDX99548 Canola cytosol 48.68 48.97
CDY05103 Canola cytosol, nucleus, peroxisome 50.15 48.72
CDX86858 Canola cytosol 48.39 48.67
CDX99549 Canola vacuole 29.91 47.89
CDX99550 Canola cytosol 47.51 47.51
CDX90759 Canola cytosol 40.18 45.36
CDY23457 Canola cytosol, nucleus, peroxisome 38.42 36.8
CDY30486 Canola cytosol, nucleus, peroxisome 38.42 36.8
CDY56988 Canola peroxisome 37.24 35.57
CDX74687 Canola cytosol 36.95 35.1
CDY42687 Canola peroxisome 36.66 34.92
CDX90656 Canola cytosol 35.19 34.29
CDY34450 Canola cytosol 34.31 34.21
CDY32234 Canola cytosol, nucleus, peroxisome 34.31 34.21
CDX73739 Canola cytosol 35.19 33.52
CDY29008 Canola cytosol 34.31 33.43
CDX75020 Canola cytosol 35.78 33.15
CDX77983 Canola cytosol 34.6 32.96
CDY39565 Canola cytosol 29.03 32.46
CDY04960 Canola cytosol 35.19 32.26
CDY48154 Canola cytosol 28.74 32.13
CDY11329 Canola cytosol 34.9 31.99
CDY18399 Canola plastid 33.14 31.92
CDX93319 Canola plastid 32.84 31.73
CDY68873 Canola plastid 32.84 31.73
CDY07746 Canola plastid 32.84 31.73
CDX80966 Canola cytosol 34.6 31.72
CDX76068 Canola cytosol 34.02 31.69
CDY02966 Canola cytosol 33.72 31.59
HORVU4Hr1G089330.2 Barley plastid 40.18 31.49
CDY14105 Canola cytosol, nucleus, peroxisome 35.19 31.25
CDY39860 Canola cytosol 28.15 31.07
CDX81188 Canola cytosol 29.03 30.94
CDY14476 Canola plastid 31.96 30.88
CDX69931 Canola cytoskeleton, cytosol, peroxisome 30.21 30.65
CDY21556 Canola cytoskeleton, cytosol, peroxisome 30.21 30.65
CDX70044 Canola cytosol, nucleus, peroxisome 31.96 30.19
CDY65238 Canola cytosol, nucleus, peroxisome 31.96 30.19
CDY69013 Canola cytosol 26.98 29.97
CDY31361 Canola cytosol 26.98 29.68
CDY41522 Canola cytosol 25.51 29.29
CDY41520 Canola cytosol 20.82 28.74
CDX76765 Canola cytosol 19.94 28.57
CDX97750 Canola cytosol 18.48 28.51
CDX94133 Canola cytosol 29.91 28.49
CDY10816 Canola cytosol 29.91 28.49
CDY01001 Canola cytosol 33.72 28.4
CDX76159 Canola cytoskeleton, cytosol, peroxisome 24.34 28.33
CDY41286 Canola cytosol 29.62 28.21
CDY08545 Canola cytosol 32.84 27.65
CDX98776 Canola cytosol 30.21 26.21
CDX72185 Canola nucleus 34.9 23.61
CDY31363 Canola cytosol 27.57 22.27
CDY27251 Canola nucleus 34.31 18.84
CDY41521 Canola cytosol, mitochondrion 0.59 9.52
Protein Annotations
Gene3D:2.60.120.330MapMan:9.2.2.3.1GO:A0A078DI24EnsemblPlants:CDX88109ProteinID:CDX88109ProteinID:CDX88109.1
InterPro:DIOX_NGO:GO:0003674GO:GO:0003824GO:GO:0008150GO:GO:0008152GO:GO:0016491
GO:GO:0055114EnsemblPlantsGene:GSBRNA2T00147543001InterPro:IPNS-likeInterPro:IPR005123InterPro:IPR027443InterPro:Oxoglu/Fe-dep_dioxygenase
PFAM:PF03171PFAM:PF14226PFscan:PS51471PANTHER:PTHR10209PANTHER:PTHR10209:SF371SUPFAM:SSF51197
UniParc:UPI0004EEAC48SEG:seg::::
Description
BnaA06g27000D
Coordinates
chrLK031854:+:671718..676950
Molecular Weight (calculated)
39139.3 Da
IEP (calculated)
5.779
GRAVY (calculated)
-0.427
Length
341 amino acids
Sequence
(BLAST)
001: MAAKLISTGI RHTTLPENYV RPLSNRPCLS DVSPLKDFPI IDLSSTDRSR LVQQIHQACS RFGFFQVINH RVSKDTIDGM VSVANEFFSM SMEEKMKLYS
101: DDPTKTTRLS TSFNVKKEEV NNWRDYLRLH CYPISKYVHE WPSNPPSFKE VVSRYSTDVR ELGFTIEELI SESLGLEKDH MRKVLGEQGQ HMAVNYYPPC
201: PEPELTYGLP AHTDPNALTI LLQDATVCGL QILIDGQWFA VNPHPDAFVI NIGDQFQALS NGIYKSVWHR AVTNTEKPRL SVASFLCPAD CAVISPAKPL
301: WEAEEDEAKP IYRDYTYAEY YKKFWSRNLD QEHCLENFLN D
Best Arabidopsis Sequence Match ( AT5G24530.1 )
(BLAST)
001: MAAKLISTGF RHTTLPENYV RPISDRPRLS EVSQLEDFPL IDLSSTDRSF LIQQIHQACA RFGFFQVINH GVNKQIIDEM VSVAREFFSM SMEEKMKLYS
101: DDPTKTTRLS TSFNVKKEEV NNWRDYLRLH CYPIHKYVNE WPSNPPSFKE IVSKYSREVR EVGFKIEELI SESLGLEKDY MKKVLGEQGQ HMAVNYYPPC
201: PEPELTYGLP AHTDPNALTI LLQDTTVCGL QILIDGQWFA VNPHPDAFVI NIGDQLQALS NGVYKSVWHR AVTNTENPRL SVASFLCPAD CAVMSPAKPL
301: WEAEDDETKP VYKDFTYAEY YKKFWSRNLD QEHCLENFLN N
Arabidopsis Description
DMR6Protein DOWNY MILDEW RESISTANCE 6 [Source:UniProtKB/Swiss-Prot;Acc:Q9FLV0]
SUBAcon: [mitochondrion]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.