Factsheet for GSMUA_Achr1P03620_001

Subcellular Localization

min:

: max

Winner_takes_all: peroxisome, nucleus, cytosol

Predictor Summary:

nucleus 2
peroxisome 1
cytosol 2
mitochondrion 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
GSMUA_Achr2P10240_001	Banana	cytosol, nucleus, peroxisome	80.12	79.65
GSMUA_Achr4P30130_001	Banana	cytosol, nucleus, peroxisome	79.23	79.23
GSMUA_Achr5P10230_001	Banana	cytosol, nucleus, peroxisome	78.93	78.93
GSMUA_Achr11P...	Banana	cytosol, nucleus, peroxisome	80.12	76.49
GSMUA_Achr8P12320_001	Banana	cytosol, nucleus, peroxisome	76.85	75.95
GSMUA_Achr1P00770_001	Banana	cytosol	73.59	73.59
GSMUA_Achr5P12830_001	Banana	cytosol	73.0	72.57
Os03t0122300-01	Rice	cytosol	73.29	72.22
TraesCS4D01G341800.1	Wheat	cytosol	71.81	72.02
EER94585	Sorghum	cytosol	71.51	71.73
TraesCS4B01G346900.1	Wheat	cytosol	71.51	71.73
HORVU4Hr1G084810.2	Barley	cytosol, peroxisome, plastid	70.33	70.54
Zm00001d029744_P001	Maize	cytosol	69.73	69.94
EER92960	Sorghum	cytosol	69.44	69.64
VIT_13s0047g00210.t01	Wine grape	cytosol	67.66	67.66
PGSC0003DMT400001570	Potato	cytosol	66.17	66.17
Solyc03g080190.2.1	Tomato	cytosol, peroxisome, plastid	65.88	65.88
VIT_16s0098g00860.t01	Wine grape	cytosol, peroxisome, plastid	65.88	65.68
KRH64291	Soybean	cytosol	65.58	65.38
KRH53636	Soybean	cytosol	65.28	65.09
TraesCS5A01G515600.2	Wheat	cytosol	72.7	63.8
PGSC0003DMT400069218	Potato	cytosol	64.69	63.74
Zm00001d027423_P002	Maize	cytosol, nucleus, peroxisome	69.14	63.14
AT5G24530.1	Thale cress	mitochondrion	63.5	62.76
Solyc06g073080.2.1	Tomato	plastid	59.35	62.5
CDY05412	Canola	mitochondrion	63.2	62.46
CDX88109	Canola	mitochondrion	63.2	62.46
CDY05445	Canola	plastid	62.91	62.17
CDX80450	Canola	mitochondrion	62.91	62.17
Bra029414.1-P	Field mustard	plastid	62.91	62.17
GSMUA_AchrUn_...	Banana	mitochondrion, plastid	58.16	50.26
Bra009771.1-P	Field mustard	mitochondrion	61.13	49.28
GSMUA_Achr5P08490_001	Banana	cytosol	40.06	37.82
GSMUA_Achr10P...	Banana	cytosol	39.17	37.5
HORVU4Hr1G089330.2	Barley	plastid	47.48	36.78
GSMUA_Achr9P15020_001	Banana	cytosol	37.69	36.18
GSMUA_Achr7P15540_001	Banana	cytosol	37.98	36.16
GSMUA_Achr5P29330_001	Banana	cytosol	37.39	35.49
GSMUA_Achr8P23330_001	Banana	cytosol	35.01	35.44
GSMUA_Achr11P...	Banana	cytosol	34.72	35.35
GSMUA_Achr6P15610_001	Banana	cytosol	36.8	35.23
GSMUA_Achr9P04430_001	Banana	cytosol	34.42	34.83
GSMUA_Achr2P19210_001	Banana	cytosol	35.91	34.67
GSMUA_Achr10P...	Banana	cytosol	32.05	34.5
GSMUA_Achr6P32920_001	Banana	cytosol	33.53	34.45
GSMUA_Achr10P...	Banana	cytosol	33.53	33.73
GSMUA_Achr3P07030_001	Banana	cytosol	33.23	33.63
GSMUA_AchrUn_...	Banana	cytosol, nucleus, peroxisome	37.69	33.33
GSMUA_Achr2P02770_001	Banana	cytosol	36.5	33.06
GSMUA_Achr7P16780_001	Banana	cytosol	36.5	32.98
GSMUA_Achr9P23620_001	Banana	cytosol	36.2	32.28
GSMUA_Achr4P04450_001	Banana	cytosol, mitochondrion	28.49	29.54
GSMUA_Achr5P04080_001	Banana	cytosol, peroxisome, plastid	30.86	28.89

Protein Annotations

Gene3D:2.60.120.330	MapMan:9.2.2.3.1	InterPro:DIOX_N	GO:GO:0003674	GO:GO:0003824	GO:GO:0005488
GO:GO:0008150	GO:GO:0008152	GO:GO:0016491	GO:GO:0046872	GO:GO:0055114	EnsemblPlantsGene:GSMUA_Achr1G03620_001
EnsemblPlants:GSMUA_Achr1P03620_001	EnsemblPlants:GSMUA_Achr1T03620_001	InterPro:IPNS-like	InterPro:IPR005123	InterPro:IPR027443	UniProt:M0RWS0
InterPro:Oxoglu/Fe-dep_dioxygenase	PFAM:PF03171	PFAM:PF14226	PFscan:PS51471	PANTHER:PTHR10209	PANTHER:PTHR10209:SF389
SUPFAM:SSF51197	UniParc:UPI000295A450	:	:	:	:

Description

Putative Naringenin,2-oxoglutarate 3-dioxygenase [Source:GMGC_GENE;Acc:GSMUA_Achr1G03620_001]

Coordinates

chr1:-:2979721..2985581

Molecular Weight (calculated)

38737.3 Da

IEP (calculated)

6.715

GRAVY (calculated)

-0.394

Length

337 amino acids

Sequence
(BLAST)

001: MADRLLSTVP HHHSLPENYI RPESQRPRLA EVISDAHVPA VDLSSPDKSH VIAQIADACR SYGFFQVLNH GVPVELMVKM MVIALEFFRL PPEEKAKHYS
101: DDPARKMRLS TSFNIRKETV HNWRDYLRLH CYPLEDYVPE WPSNPSSFKE VASAYCKEVR QLGFRLLGAI SLSLGLEEKY MEEVLGEQEQ HMAVNYYPKC
201: PQPQLTYGLP PHTDPNALTI LLQDPDVSGL QVLKHGQWIA VHPQPHAFVI NIGDQLQALS NGRYKSVWHR AVVNSEKERM SIASFLCPCN CAIISPPEKL
301: ISEASPAMYR SYTYEEYYKK FWSRNLDDEH CLEVFRS

Best Arabidopsis Sequence Match ( AT5G24530.1 )
(BLAST)

001: MAAKLISTGF RHTTLPENYV RPISDRPRLS EVSQLEDFPL IDLSSTDRSF LIQQIHQACA RFGFFQVINH GVNKQIIDEM VSVAREFFSM SMEEKMKLYS
101: DDPTKTTRLS TSFNVKKEEV NNWRDYLRLH CYPIHKYVNE WPSNPPSFKE IVSKYSREVR EVGFKIEELI SESLGLEKDY MKKVLGEQGQ HMAVNYYPPC
201: PEPELTYGLP AHTDPNALTI LLQDTTVCGL QILIDGQWFA VNPHPDAFVI NIGDQLQALS NGVYKSVWHR AVTNTENPRL SVASFLCPAD CAVMSPAKPL
301: WEAEDDETKP VYKDFTYAEY YKKFWSRNLD QEHCLENFLN N

Arabidopsis Description

DMR6Protein DOWNY MILDEW RESISTANCE 6 [Source:UniProtKB/Swiss-Prot;Acc:Q9FLV0]
SUBAcon: [mitochondrion]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.