Factsheet for GSMUA_Achr2P10240_001

Subcellular Localization

min:

: max

Winner_takes_all: peroxisome, nucleus, cytosol

Predictor Summary:

nucleus 2
peroxisome 1
cytosol 2
plastid 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
GSMUA_Achr4P30130_001	Banana	cytosol, nucleus, peroxisome	82.6	83.09
GSMUA_Achr5P12830_001	Banana	cytosol	80.53	80.53
GSMUA_Achr1P03620_001	Banana	cytosol, nucleus, peroxisome	79.65	80.12
GSMUA_Achr1P00770_001	Banana	cytosol	78.47	78.93
GSMUA_Achr11P...	Banana	cytosol, nucleus, peroxisome	79.06	75.92
GSMUA_Achr5P10230_001	Banana	cytosol, nucleus, peroxisome	74.93	75.37
GSMUA_Achr8P12320_001	Banana	cytosol, nucleus, peroxisome	74.93	74.49
EER94585	Sorghum	cytosol	71.98	72.62
TraesCS4D01G341800.1	Wheat	cytosol	71.98	72.62
Os03t0122300-01	Rice	cytosol	72.86	72.22
TraesCS4B01G346900.1	Wheat	cytosol	71.09	71.73
EER92960	Sorghum	cytosol	71.09	71.73
HORVU4Hr1G084810.2	Barley	cytosol, peroxisome, plastid	70.5	71.13
Zm00001d029744_P001	Maize	cytosol	70.5	71.13
Solyc03g080190.2.1	Tomato	cytosol, peroxisome, plastid	67.55	67.95
PGSC0003DMT400001570	Potato	cytosol	66.37	66.77
KRH64291	Soybean	cytosol	65.78	65.98
KRH53636	Soybean	cytosol	65.78	65.98
VIT_13s0047g00210.t01	Wine grape	cytosol	65.19	65.58
Zm00001d027423_P002	Maize	cytosol, nucleus, peroxisome	70.21	64.5
CDY05412	Canola	mitochondrion	64.6	64.22
VIT_16s0098g00860.t01	Wine grape	cytosol, peroxisome, plastid	64.01	64.2
PGSC0003DMT400069218	Potato	cytosol	64.31	63.74
AT5G24530.1	Thale cress	mitochondrion	64.01	63.64
CDX88109	Canola	mitochondrion	63.72	63.34
CDX80450	Canola	mitochondrion	63.42	63.05
TraesCS5A01G515600.2	Wheat	cytosol	71.39	63.02
CDY05445	Canola	plastid	63.13	62.76
Bra029414.1-P	Field mustard	plastid	63.13	62.76
Solyc06g073080.2.1	Tomato	plastid	59.0	62.5
Bra009771.1-P	Field mustard	mitochondrion	61.65	50.0
GSMUA_AchrUn_...	Banana	mitochondrion, plastid	56.64	49.23
GSMUA_Achr11P...	Banana	cytosol	37.17	38.07
GSMUA_Achr10P...	Banana	cytosol	38.94	37.5
HORVU4Hr1G089330.2	Barley	plastid	47.2	36.78
GSMUA_Achr9P15020_001	Banana	cytosol	38.05	36.75
GSMUA_Achr7P15540_001	Banana	cytosol	38.05	36.44
GSMUA_Achr5P08490_001	Banana	cytosol	37.76	35.85
GSMUA_Achr8P23330_001	Banana	cytosol	35.1	35.74
GSMUA_Achr6P15610_001	Banana	cytosol	36.87	35.51
GSMUA_Achr5P29330_001	Banana	cytosol	37.17	35.49
GSMUA_Achr10P...	Banana	cytosol	32.74	35.46
GSMUA_Achr9P04430_001	Banana	cytosol	34.81	35.44
GSMUA_Achr2P19210_001	Banana	cytosol	36.28	35.24
GSMUA_Achr3P07030_001	Banana	cytosol	34.22	34.83
GSMUA_Achr10P...	Banana	cytosol	34.22	34.63
GSMUA_Achr6P32920_001	Banana	cytosol	33.33	34.45
GSMUA_AchrUn_...	Banana	cytosol, nucleus, peroxisome	36.87	32.81
GSMUA_Achr9P23620_001	Banana	cytosol	36.58	32.8
GSMUA_Achr2P02770_001	Banana	cytosol	35.99	32.8
GSMUA_Achr7P16780_001	Banana	cytosol	34.81	31.64
GSMUA_Achr4P04450_001	Banana	cytosol, mitochondrion	30.09	31.38
GSMUA_Achr5P04080_001	Banana	cytosol, peroxisome, plastid	33.04	31.11

Protein Annotations

Gene3D:2.60.120.330	MapMan:9.2.2.3.1	InterPro:DIOX_N	GO:GO:0003674	GO:GO:0003824	GO:GO:0005488
GO:GO:0008150	GO:GO:0008152	GO:GO:0016491	GO:GO:0046872	GO:GO:0055114	EnsemblPlantsGene:GSMUA_Achr2G10240_001
EnsemblPlants:GSMUA_Achr2P10240_001	EnsemblPlants:GSMUA_Achr2T10240_001	InterPro:IPNS-like	InterPro:IPR005123	InterPro:IPR027443	UniProt:M0S6R5
InterPro:Oxoglu/Fe-dep_dioxygenase	PFAM:PF03171	PFAM:PF14226	PFscan:PS51471	PANTHER:PTHR10209	PANTHER:PTHR10209:SF389
SUPFAM:SSF51197	UniParc:UPI00029585BB	SEG:seg	:	:	:

Description

Putative Naringenin,2-oxoglutarate 3-dioxygenase [Source:GMGC_GENE;Acc:GSMUA_Achr2G10240_001]

Coordinates

chr2:-:13410349..13413214

Molecular Weight (calculated)

38472.0 Da

IEP (calculated)

6.668

GRAVY (calculated)

-0.322

Length

339 amino acids

Sequence
(BLAST)

001: MADQLLSTVS HHSSLPDTYV RPESQRPRLH EVVRDANIPT IDLGSPDVSR VIAQVGDACR SFGFFQVVNH GVPVELMLAM MAVASEFFRL PPEEKAKHYS
101: DDPTKKMRLS TSFNIRKETV RNWRDYLRLH CYPLEEFVPG WPSNPASFKE VVSGYCREVR QLGLRLLGLI SLSLGLEEAY MVKVLGEQEQ HMAVNYYPKC
201: PEPELTYGLQ AHTDPNALTI LLQDPKVAGL QVLKNGKWIA VNPQPDAYVI NIGDQLQALS NGRYRSVCHR AVVNSETDRM SVASFLCPCN SAVISTPEKL
301: VVDGSPAIYR SYTYEEYYNK FWSRNLDDEH CLELFKSQR

Best Arabidopsis Sequence Match ( AT3G11180.1 )
(BLAST)

001: MNNLDEIKIE SKTCLNDQEQ EVKIDNMHMS DQDKNKIEIK NKSGLGEKWP EPIVRVQSLA ESNLTSLPDR YIKPPSQRPQ TTIIDHQPEV ADINIPIIDL
101: DSLFSGNEDD KKRISEACRE WGFFQVINHG VKPELMDAAR ETWKSFFNLP VEAKEVYSNS PRTYEGYGSR LGVEKGAILD WNDYYYLHFL PLALKDFNKW
201: PSLPSNIREM NDEYGKELVK LGGRLMTILS SNLGLRAEQL QEAFGGEDVG ACLRVNYYPK CPQPELALGL SPHSDPGGMT ILLPDDQVVG LQVRHGDTWI
301: TVNPLRHAFI VNIGDQIQIL SNSKYKSVEH RVIVNSEKER VSLAFFYNPK SDIPIQPMQQ LVTSTMPPLY PPMTFDQYRL FIRTQGPRGK SHVESHISPR

Arabidopsis Description

2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein [Source:UniProtKB/TrEMBL;Acc:F4J670]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.