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Potato
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Potato
Subcellular Localization
min:
: max

 
Winner_takes_all: cytosol

Predictor Summary:
  • nucleus 1
  • peroxisome 1
  • cytosol 3
  • plastid 1
Predictors GFP MS/MS Papers
Winner Takes All:cytosol
Any Predictor:cytosol, nucleus, peroxisome, plastid
BaCelLo:nucleus
MultiLoc:peroxisome
Plant-mPloc:cytosol
PProwler:plastid
WoLF PSORT:cytosol
YLoc:cytosol
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
Solyc06g073080.2.1 Tomato plastid 89.18 95.31
PGSC0003DMT400001570 Potato cytosol 78.66 79.82
KRH64291 Soybean cytosol 74.56 75.44
KRH53636 Soybean cytosol 73.39 74.26
VIT_13s0047g00210.t01 Wine grape cytosol 71.05 72.11
AT5G24530.1 Thale cress mitochondrion 67.25 67.45
CDY05412 Canola mitochondrion 66.96 67.16
CDY05445 Canola plastid 66.37 66.57
Bra029414.1-P Field mustard plastid 66.37 66.57
CDX80450 Canola mitochondrion 66.08 66.28
CDX88109 Canola mitochondrion 66.08 66.28
Os03t0122300-01 Rice cytosol 66.08 66.08
EER92960 Sorghum cytosol 64.04 65.18
GSMUA_Achr5P10230_001 Banana cytosol, nucleus, peroxisome 63.74 64.69
GSMUA_Achr1P03620_001 Banana cytosol, nucleus, peroxisome 63.74 64.69
TraesCS4D01G341800.1 Wheat cytosol 63.45 64.58
GSMUA_Achr2P10240_001 Banana cytosol, nucleus, peroxisome 63.74 64.31
GSMUA_Achr8P12320_001 Banana cytosol, nucleus, peroxisome 64.04 64.22
GSMUA_Achr4P30130_001 Banana cytosol, nucleus, peroxisome 63.16 64.09
TraesCS4B01G346900.1 Wheat cytosol 62.87 63.99
HORVU4Hr1G084810.2 Barley cytosol, peroxisome, plastid 62.57 63.69
GSMUA_Achr1P00770_001 Banana cytosol 61.7 62.61
EER94585 Sorghum cytosol 61.4 62.5
GSMUA_Achr11P... Banana cytosol, nucleus, peroxisome 64.04 62.04
Os04t0581000-01 Rice cytosol 61.11 61.47
Zm00001d029744_P001 Maize cytosol 59.65 60.71
KXG26978 Sorghum cytosol 60.53 60.35
TraesCS2D01G392800.1 Wheat cytosol 59.36 59.71
GSMUA_Achr5P12830_001 Banana cytosol 59.06 59.59
TraesCS2A01G395000.1 Wheat cytosol 58.77 59.12
HORVU0Hr1G005300.1 Barley cytosol 58.19 58.53
TraesCS2B01G413000.1 Wheat cytosol, nucleus, peroxisome 58.19 58.53
Zm00001d027423_P002 Maize cytosol, nucleus, peroxisome 62.57 57.99
TraesCS5A01G515600.2 Wheat cytosol 64.04 57.03
Bra009771.1-P Field mustard mitochondrion 63.16 51.67
PGSC0003DMT400051681 Potato cytosol 38.6 39.17
PGSC0003DMT400013913 Potato cytoskeleton, cytosol, peroxisome 29.82 38.93
PGSC0003DMT400049193 Potato cytosol, mitochondrion, peroxisome 20.76 38.8
PGSC0003DMT400013920 Potato cytoskeleton, cytosol, peroxisome 29.24 37.88
PGSC0003DMT400054579 Potato cytosol 37.13 37.24
PGSC0003DMT400030676 Potato mitochondrion 35.67 35.78
PGSC0003DMT400031149 Potato cytosol 36.55 35.11
PGSC0003DMT400009900 Potato cytosol 39.18 35.08
PGSC0003DMT400013924 Potato cytosol 11.99 34.75
PGSC0003DMT400067044 Potato cytosol 33.92 34.52
PGSC0003DMT400036565 Potato cytosol 35.38 34.38
PGSC0003DMT400025139 Potato cytosol 33.33 34.13
PGSC0003DMT400041798 Potato cytosol 33.33 33.93
PGSC0003DMT400070302 Potato cytosol 36.55 33.88
PGSC0003DMT400025150 Potato cytosol 32.46 33.74
PGSC0003DMT400083733 Potato cytosol 35.38 33.61
HORVU4Hr1G089330.2 Barley plastid 42.69 33.56
PGSC0003DMT400009175 Potato cytosol 35.09 33.33
PGSC0003DMT400067586 Potato cytosol, peroxisome, plastid 34.21 33.14
PGSC0003DMT400049192 Potato cytosol 35.38 33.06
PGSC0003DMT400028828 Potato cytosol 34.8 33.06
PGSC0003DMT400092726 Potato cytosol, peroxisome, plastid 33.63 32.76
PGSC0003DMT400025148 Potato cytosol 26.61 32.73
PGSC0003DMT400070444 Potato cytosol, peroxisome, plastid 31.87 30.97
PGSC0003DMT400088016 Potato cytosol 27.49 28.83
PGSC0003DMT400083728 Potato cytosol 13.74 28.14
PGSC0003DMT400029386 Potato cytosol, nucleus, peroxisome 28.95 26.4
PGSC0003DMT400058554 Potato cytosol 28.66 21.54
Protein Annotations
EntrezGene:102604390Gene3D:2.60.120.330MapMan:9.2.2.3.1InterPro:DIOX_NGO:GO:0003674GO:GO:0003824
GO:GO:0005488GO:GO:0008150GO:GO:0008152GO:GO:0016491GO:GO:0046872GO:GO:0055114
InterPro:IPNS-likeInterPro:IPR005123InterPro:IPR027443UniProt:M1CK41InterPro:Oxoglu/Fe-dep_dioxygenasePFAM:PF03171
PFAM:PF14226EnsemblPlantsGene:PGSC0003DMG401026923PGSC:PGSC0003DMG401026923EnsemblPlants:PGSC0003DMT400069218PFscan:PS51471PANTHER:PTHR10209
PANTHER:PTHR10209:SF371SUPFAM:SSF51197UniParc:UPI000295BB88RefSeq:XP_006347314.1::
Description
1-aminocyclopropane-1-carboxylate oxidase [Source:PGSC_GENE;Acc:PGSC0003DMG401026923]
Coordinates
chr6:-:53643710..53647656
Molecular Weight (calculated)
39117.5 Da
IEP (calculated)
5.139
GRAVY (calculated)
-0.404
Length
342 amino acids
Sequence
(BLAST)
001: METTSVLSGG FNHSTLPESY VRPESQRPRM SEVVDRDDLV PVIDMSCTDR NVIVHQIGEA CRLYGFFQVI NHGVSKKVMD EMLGVAHEFF KLPVEEKMKL
101: YSDDPSKTMR LSTSFNVKKE TVHNWRDYLR LHCYPLDKYA PEWPSNPPSF REIVSKYCME VRQVGYRLEE AISESLGLEK DCIKNVLGEQ GQHMAINFYP
201: PCPQPELTYG LPAHTDPNAI TILLQDLQVA GLQVLKDGEW LSIKPQPDAF VINLGDQLEA LSNGKYKSIW HRAIVNSDKA RMSVASFLCP NDCSIISAPK
301: TLIEDGSSAI YRDFTYTEYY DKFWSRNLDQ EYCLELFKND GT
Best Arabidopsis Sequence Match ( AT5G24530.1 )
(BLAST)
001: MAAKLISTGF RHTTLPENYV RPISDRPRLS EVSQLEDFPL IDLSSTDRSF LIQQIHQACA RFGFFQVINH GVNKQIIDEM VSVAREFFSM SMEEKMKLYS
101: DDPTKTTRLS TSFNVKKEEV NNWRDYLRLH CYPIHKYVNE WPSNPPSFKE IVSKYSREVR EVGFKIEELI SESLGLEKDY MKKVLGEQGQ HMAVNYYPPC
201: PEPELTYGLP AHTDPNALTI LLQDTTVCGL QILIDGQWFA VNPHPDAFVI NIGDQLQALS NGVYKSVWHR AVTNTENPRL SVASFLCPAD CAVMSPAKPL
301: WEAEDDETKP VYKDFTYAEY YKKFWSRNLD QEHCLENFLN N
Arabidopsis Description
DMR6Protein DOWNY MILDEW RESISTANCE 6 [Source:UniProtKB/Swiss-Prot;Acc:Q9FLV0]
SUBAcon: [mitochondrion]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.