Factsheet for PGSC0003DMT400067044

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

plastid 1
peroxisome 1
cytosol 3
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, peroxisome, plastid
BaCelLo:	plastid
MultiLoc:	peroxisome
Plant-mPloc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
PGSC0003DMT400092726	Potato	cytosol, peroxisome, plastid	85.12	81.48
PGSC0003DMT400088016	Potato	cytosol	69.35	71.47
CDY30486	Canola	cytosol, nucleus, peroxisome	60.71	57.3
AT2G44800.1	Thale cress	cytosol, nucleus, peroxisome, plastid	59.82	56.3
Bra004867.1-P	Field mustard	cytosol	59.52	55.71
CDX74687	Canola	cytosol	59.52	55.71
CDY23457	Canola	cytosol, nucleus, peroxisome	58.93	55.62
AT3G60290.1	Thale cress	cytosol, nucleus, peroxisome	58.93	55.46
Bra014500.1-P	Field mustard	cytosol	58.33	54.9
KRH40180	Soybean	plastid	57.44	54.83
CDY56988	Canola	peroxisome	57.74	54.34
CDY42687	Canola	peroxisome	57.14	53.63
PGSC0003DMT400013913	Potato	cytoskeleton, cytosol, peroxisome	32.14	41.22
PGSC0003DMT400013920	Potato	cytoskeleton, cytosol, peroxisome	31.85	40.53
PGSC0003DMT400013924	Potato	cytosol	13.69	38.98
PGSC0003DMT400070302	Potato	cytosol	42.56	38.75
PGSC0003DMT400049193	Potato	cytosol, mitochondrion, peroxisome	20.54	37.7
PGSC0003DMT400009900	Potato	cytosol	41.67	36.65
PGSC0003DMT400001570	Potato	cytosol	36.01	35.91
PGSC0003DMT400083733	Potato	cytosol	38.1	35.56
PGSC0003DMT400067586	Potato	cytosol, peroxisome, plastid	36.61	34.84
PGSC0003DMT400069218	Potato	cytosol	34.52	33.92
PGSC0003DMT400025150	Potato	cytosol	31.25	31.91
PGSC0003DMT400051681	Potato	cytosol	31.85	31.75
PGSC0003DMT400049192	Potato	cytosol	34.23	31.42
PGSC0003DMT400054579	Potato	cytosol	31.85	31.38
PGSC0003DMT400028828	Potato	cytosol	33.04	30.83
PGSC0003DMT400036565	Potato	cytosol	31.25	29.83
PGSC0003DMT400031149	Potato	cytosol	31.25	29.49
PGSC0003DMT400025148	Potato	cytosol	24.11	29.14
PGSC0003DMT400030676	Potato	mitochondrion	29.46	29.03
PGSC0003DMT400041798	Potato	cytosol	28.87	28.87
PGSC0003DMT400083728	Potato	cytosol	13.99	28.14
PGSC0003DMT400025139	Potato	cytosol	27.68	27.84
PGSC0003DMT400009175	Potato	cytosol	29.76	27.78
PGSC0003DMT400070444	Potato	cytosol, peroxisome, plastid	27.38	26.14
PGSC0003DMT400029386	Potato	cytosol, nucleus, peroxisome	26.19	23.47
PGSC0003DMT400058554	Potato	cytosol	29.46	21.76

Protein Annotations

Gene3D:2.60.120.330	MapMan:50.1.13	InterPro:DIOX_N	GO:GO:0003674	GO:GO:0003824	GO:GO:0005488
GO:GO:0008150	GO:GO:0008152	GO:GO:0016491	GO:GO:0046872	GO:GO:0055114	InterPro:IPNS-like
InterPro:IPR005123	InterPro:IPR027443	UniProt:M1CGL2	InterPro:Oxoglu/Fe-dep_dioxygenase	PFAM:PF03171	PFAM:PF14226
EnsemblPlantsGene:PGSC0003DMG400026057	PGSC:PGSC0003DMG400026057	EnsemblPlants:PGSC0003DMT400067044	PFscan:PS51471	PANTHER:PTHR10209	PANTHER:PTHR10209:SF224
SUPFAM:SSF51197	UniParc:UPI000296619E	:	:	:	:

Description

Flavonol synthase/flavanone 3-hydroxylase [Source:PGSC_GENE;Acc:PGSC0003DMG400026057]

Coordinates

chr1:+:69171579..69173348

Molecular Weight (calculated)

38185.0 Da

IEP (calculated)

6.627

GRAVY (calculated)

-0.253

Length

336 amino acids

Sequence
(BLAST)

001: MTLTKEELTC VPKRYILPPS LRPNGAEYNT CLPIVDLSYL QHPLVRPQII QEVHLACKKF GFFQVVNHGI PMSVMKDAID AASEFFNLPT EEKRHLLSSN
101: VHDPVRYGTS LNHVKDKVYF WRDFLKHYAN PTSTWLDFWP SNPTAYKKKM GNYTVAAQKL QEELMEVIFE SLGLNSNYLH EDIAEGSQVM AVNCYPACPE
201: PDLTLGLPPH TDYGMLTIIL QNHLGLQIMD RDEKWHSVPL IEGALIVQLG DQMEVLSNGR YKSVLHRATV NSEKKRISIA SLHSLALGKK VRPASELVNE
301: QHILSYKEGS FSDFLDFISG EDIVEAKYID KLKINS

Best Arabidopsis Sequence Match ( AT2G44800.1 )
(BLAST)

001: MEETKMSLLD DSFTSAMTLT NSGVPQVPDR YVLPPSQRPA LGSSLGTSET TLPVIDLSLL HQPFLRSLAI HEISMACKEF GFFQVINHGI PSSVVNDALD
101: AATQFFDLPV EEKMLLVSAN VHEPVRYGTS LNHSTDRVHY WRDFIKHYSH PLSKWIDMWP SNPPCYKDKV GKYAEATHLL HKQLIEAISE SLGLEKNYLQ
201: EEIEEGSQVM AVNCYPACPE PEMALGMPPH SDFSSLTILL QSSKGLQIMD CNKNWVCVPY IEGALIVQLG DQVEVMSNGI YKSVIHRVTV NKEVKRLSFA
301: SLHSLPLHKK ISPAPKLVNP NNAPAYGEFS FNDFLNYISS NDFIQERFID TIKKSSS

Arabidopsis Description

2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein [Source:UniProtKB/TrEMBL;Acc:F4IV21]
SUBAcon: [peroxisome,plastid,nucleus,cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.