Factsheet for PGSC0003DMT400009175

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 4
plastid 2
peroxisome 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

PPI

Inferred distinct locusB in Crop

locusB	locations
PGSC0003DMT400036565

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT3G51240.1	PGSC0003DMT400036565	AT5G08640.1	18467451

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Solyc02g083860.2.1	Tomato	cytosol	96.94	96.41
VIT_18s0001g14310.t01	Wine grape	cytosol	84.72	85.2
VIT_04s0023g03370.t01	Wine grape	cytosol	85.56	84.85
AT3G51240.1	Thale cress	cytosol	80.83	81.28
CDX77983	Canola	cytosol	80.56	81.01
Bra036828.1-P	Field mustard	cytosol	80.28	80.73
CDX90656	Canola	cytosol	78.33	80.57
CDX73739	Canola	cytosol	80.0	80.45
CDY29008	Canola	cytosol	76.94	79.14
Bra012862.1-P	Field mustard	cytosol	76.67	78.86
GSMUA_Achr2P02770_001	Banana	cytosol	80.56	77.96
GSMUA_Achr7P16780_001	Banana	cytosol	80.56	77.75
KRH76658	Soybean	cytosol	75.28	74.25
Zm00001d001960_P001	Maize	plastid	74.17	72.95
TraesCS2B01G613300.1	Wheat	cytosol, mitochondrion, peroxisome, plastid	69.72	71.92
EES13031	Sorghum	cytosol	74.17	71.39
TraesCS2B01G521500.1	Wheat	golgi	74.44	70.9
TraesCS2A01G493500.1	Wheat	golgi	73.89	70.56
TraesCS2D01G493400.1	Wheat	golgi, nucleus	73.61	70.11
KXG27349	Sorghum	plastid	75.28	62.88
CDX76765	Canola	cytosol	40.56	61.34
Bra014831.1-P	Field mustard	cytosol	53.61	59.94
HORVU2Hr1G110130.3	Barley	mitochondrion	73.06	59.23
CDX76159	Canola	cytoskeleton, cytosol, peroxisome	48.06	59.04
Os04t0662600-00	Rice	mitochondrion, peroxisome	58.61	51.97
PGSC0003DMT400049193	Potato	cytosol, mitochondrion, peroxisome	21.11	41.53
PGSC0003DMT400001570	Potato	cytosol	33.89	36.2
PGSC0003DMT400069218	Potato	cytosol	33.33	35.09
PGSC0003DMT400031149	Potato	cytosol	33.06	33.43
PGSC0003DMT400049192	Potato	cytosol	33.33	32.79
PGSC0003DMT400051681	Potato	cytosol	30.0	32.05
PGSC0003DMT400013924	Potato	cytosol	10.28	31.36
PGSC0003DMT400030676	Potato	mitochondrion	29.44	31.09
PGSC0003DMT400054579	Potato	cytosol	29.44	31.09
PGSC0003DMT400028828	Potato	cytosol	30.83	30.83
PGSC0003DMT400067044	Potato	cytosol	27.78	29.76
PGSC0003DMT400083733	Potato	cytosol	29.44	29.44
PGSC0003DMT400041798	Potato	cytosol	27.22	29.17
PGSC0003DMT400013913	Potato	cytoskeleton, cytosol, peroxisome	21.11	29.01
PGSC0003DMT400070302	Potato	cytosol	29.72	29.0
PGSC0003DMT400036565	Potato	cytosol	28.06	28.69
PGSC0003DMT400013920	Potato	cytoskeleton, cytosol, peroxisome	20.56	28.03
PGSC0003DMT400025150	Potato	cytosol	25.56	27.96
PGSC0003DMT400025139	Potato	cytosol	25.83	27.84
PGSC0003DMT400067586	Potato	cytosol, peroxisome, plastid	27.22	27.76
PGSC0003DMT400009900	Potato	cytosol	29.44	27.75
PGSC0003DMT400092726	Potato	cytosol, peroxisome, plastid	26.94	27.64
Os08t0480200-01	Rice	cytosol	25.83	27.6
PGSC0003DMT400070444	Potato	cytosol, peroxisome, plastid	26.67	27.27
PGSC0003DMT400025148	Potato	cytosol	20.0	25.9
PGSC0003DMT400088016	Potato	cytosol	23.06	25.46
PGSC0003DMT400029386	Potato	cytosol, nucleus, peroxisome	25.56	24.53
PGSC0003DMT400058554	Potato	cytosol	28.33	22.42
PGSC0003DMT400083728	Potato	cytosol	8.61	18.56
Os08t0480100-01	Rice	cytosol, endoplasmic reticulum, plastid	0.83	0.48

Protein Annotations

Gene3D:2.60.120.330	MapMan:9.2.2.4.3	ProteinID:AAM48289	ProteinID:AAM48289.1	ProteinID:AEN83504	ProteinID:AEN83504.1
EMBL:AY102035	InterPro:DIOX_N	GO:GO:0003674	GO:GO:0003824	GO:GO:0005488	GO:GO:0008150
GO:GO:0008152	GO:GO:0016491	GO:GO:0045486	GO:GO:0046872	GO:GO:0055114	EMBL:HQ659496
InterPro:IPNS-like	InterPro:IPR005123	InterPro:IPR027443	UniProt:M0ZVQ2	InterPro:Oxoglu/Fe-dep_dioxygenase	PFAM:PF03171
PFAM:PF14226	EnsemblPlantsGene:PGSC0003DMG400003563	PGSC:PGSC0003DMG400003563	EnsemblPlants:PGSC0003DMT400009175	PFscan:PS51471	PANTHER:PTHR10209
PANTHER:PTHR10209:SF137	SUPFAM:SSF51197	UniParc:UPI000294DE59	SEG:seg	:	:

Description

Flavanone 3 beta-hydroxylase [Source:PGSC_GENE;Acc:PGSC0003DMG400003563]

Coordinates

chr2:-:39368653..39370527

Molecular Weight (calculated)

40574.5 Da

IEP (calculated)

5.238

GRAVY (calculated)

-0.469

Length

360 amino acids

Sequence
(BLAST)

001: MAPSTLTALA NEKTLQTSFI RDEEERPKVA YNKFSDEIPV ISLQGIDDIN GSRRSEICEK IVNACEDWGV FQVTDHGVDA QLISEMTKLA KEFFELPPDE
101: KLRFDMSGGK KGGFIVSSHL QGEVVQDWRE IVTYFSYPIR ARDYSRWPDK PQGWKAVTEK YSEKLMDLAC KLLEVLSEAM GLEKEALTKA CVDMDQKVVV
201: NFYPKCPEPD LTLGLKRHTD PGTITLLLQD QVGGLQATKD NGKTWITVQP VEGAFVVNLG DHGHYLSNGR FKNADHQAVV NSNSSRLSIA TFQNPAPDAK
301: VYPLKIREGE KAIMDEPITF AEMYRRKMSK DLELARLKKL AKEQTEEAKL ESKPIEEILA

Best Arabidopsis Sequence Match ( AT3G51240.1 )
(BLAST)

001: MAPGTLTELA GESKLNSKFV RDEDERPKVA YNVFSDEIPV ISLAGIDDVD GKRGEICRQI VEACENWGIF QVVDHGVDTN LVADMTRLAR DFFALPPEDK
101: LRFDMSGGKK GGFIVSSHLQ GEAVQDWREI VTYFSYPVRN RDYSRWPDKP EGWVKVTEEY SERLMSLACK LLEVLSEAMG LEKESLTNAC VDMDQKIVVN
201: YYPKCPQPDL TLGLKRHTDP GTITLLLQDQ VGGLQATRDN GKTWITVQPV EGAFVVNLGD HGHFLSNGRF KNADHQAVVN SNSSRLSIAT FQNPAPDATV
301: YPLKVREGEK AILEEPITFA EMYKRKMGRD LELARLKKLA KEERDHKEVD KPVDQIFA

Arabidopsis Description

F3HNaringenin,2-oxoglutarate 3-dioxygenase [Source:UniProtKB/Swiss-Prot;Acc:Q9S818]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.