Factsheet for Bra012862.1-P

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 4
plastid 1
peroxisome 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

PPI

Inferred distinct locusB in Crop

locusB	locations
Bra009358.1-P

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT3G51240.1	Bra009358.1-P	AT5G08640.1	18467451

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDX90656	Canola	cytosol	96.57	96.57
Bra036828.1-P	Field mustard	cytosol	90.57	88.55
AT3G51240.1	Thale cress	cytosol	89.43	87.43
VIT_04s0023g03370.t01	Wine grape	cytosol	81.71	78.79
VIT_18s0001g14310.t01	Wine grape	cytosol	80.57	78.77
Solyc02g083860.2.1	Tomato	cytosol	79.43	76.8
PGSC0003DMT400009175	Potato	cytosol	78.86	76.67
KRH69784	Soybean	cytosol	79.43	74.13
GSMUA_Achr2P02770_001	Banana	cytosol	78.29	73.66
KRH69787	Soybean	nucleus	78.86	73.4
KRH08080	Soybean	cytosol	77.14	72.58
GSMUA_Achr7P16780_001	Banana	cytosol	76.57	71.85
Zm00001d001960_P001	Maize	plastid	73.14	69.95
TraesCS2B01G613300.1	Wheat	cytosol, mitochondrion, peroxisome, plastid	69.43	69.63
EES13031	Sorghum	cytosol	72.57	67.91
TraesCS2B01G521500.1	Wheat	golgi	72.29	66.93
TraesCS2A01G493500.1	Wheat	golgi	71.71	66.58
TraesCS2D01G493400.1	Wheat	golgi, nucleus	71.43	66.14
Bra014831.1-P	Field mustard	cytosol	58.86	63.98
KXG27349	Sorghum	plastid	73.43	59.63
HORVU2Hr1G110130.3	Barley	mitochondrion	70.29	55.41
Os04t0662600-00	Rice	mitochondrion, peroxisome	56.86	49.01
Bra029414.1-P	Field mustard	plastid	33.43	34.31
Bra037921.1-P	Field mustard	cytosol	34.29	34.19
Bra038447.1-P	Field mustard	cytosol, nucleus, peroxisome	33.14	33.92
Bra034168.1-P	Field mustard	cytosol	28.0	33.91
Bra000713.1-P	Field mustard	plastid	33.43	33.43
Bra000712.1-P	Field mustard	cytosol, nucleus, peroxisome	33.43	33.33
Bra017132.1-P	Field mustard	plastid	32.57	32.2
Bra000045.1-P	Field mustard	plastid	31.71	31.44
Bra009358.1-P	Field mustard	cytoskeleton, cytosol, peroxisome	29.43	30.65
Bra014716.1-P	Field mustard	cytosol	30.86	29.51
Bra028752.1-P	Field mustard	cytosol	31.14	29.3
Bra005860.1-P	Field mustard	cytosol	30.86	29.03
Bra013652.1-P	Field mustard	cytosol	29.43	28.77
Bra009771.1-P	Field mustard	mitochondrion	33.43	27.99
Bra018076.1-P	Field mustard	cytosol	24.29	27.87
Bra019350.1-P	Field mustard	cytosol	28.29	27.73
Bra038647.1-P	Field mustard	cytosol	24.29	27.69
Bra034861.1-P	Field mustard	cytosol	31.71	27.41
Bra038648.1-P	Field mustard	cytosol	23.14	27.27
Bra017227.1-P	Field mustard	cytosol	28.57	27.25
Bra004867.1-P	Field mustard	cytosol	27.71	27.02
Bra014500.1-P	Field mustard	cytosol	27.14	26.61
Os08t0480200-01	Rice	cytosol	25.14	26.11
Bra029211.1-P	Field mustard	cytosol	22.86	25.81
Bra037747.1-P	Field mustard	cytosol	22.86	25.48
Bra028696.1-P	Field mustard	cytosol	22.86	22.16
Bra009258.1-P	Field mustard	cytosol, nucleus, peroxisome	16.86	21.38
Bra029212.1-P	Field mustard	cytosol	23.14	19.19
Bra007204.1-P	Field mustard	cytosol	31.14	17.55
Os08t0480100-01	Rice	cytosol, endoplasmic reticulum, plastid	0.57	0.32

Protein Annotations

Gene3D:2.60.120.330	MapMan:9.2.2.4.3	EnsemblPlantsGene:Bra012862	EnsemblPlants:Bra012862.1	EnsemblPlants:Bra012862.1-P	InterPro:DIOX_N
GO:GO:0003674	GO:GO:0003824	GO:GO:0005488	GO:GO:0008150	GO:GO:0008152	GO:GO:0016491
GO:GO:0046872	GO:GO:0055114	InterPro:IPNS-like	InterPro:IPR005123	InterPro:IPR027443	UniProt:M4D8Q2
InterPro:Oxoglu/Fe-dep_dioxygenase	PFAM:PF03171	PFAM:PF14226	PFscan:PS51471	PANTHER:PTHR10209	PANTHER:PTHR10209:SF137
SUPFAM:SSF51197	UniParc:UPI00025406D8	SEG:seg	:	:	:

Description

AT3G51240 (E=4e-179) F3H, TT6, F3'H | F3H (FLAVANONE 3-HYDROXYLASE); naringenin 3-dioxygenase

Coordinates

chrA03:+:21883585..21885045

Molecular Weight (calculated)

38903.5 Da

IEP (calculated)

5.716

GRAVY (calculated)

-0.371

Length

350 amino acids

Sequence
(BLAST)

001: MAPATLTELA GESKLNSKFV RDVDERPKVA YNEFSNEIPV ISLAGIDHVG GKRGDICRQI VEACENWGVF KVVDHGVDTK LVGDMTRLAS DFFSLPPEDK
101: LKFDMSGGKK GGFIVSSHLQ GEVVQDWREI VTYFSYPVRN RDYSRWPNKP EGWVKVTEEY SEKLIELACK LLEILSEAMG LEKEALTNAC VDMDQKIVVN
201: YYPKCPQPDL TLGLKRHTDP GTITLLLQDQ VGGLQATRDD GQTWITVQPV EGAFVVNLGD HGHYLSNGRF KNADHQAVVN SNSSRLSIAT FQNPAPEATV
301: YPLKVKEGEK PILEEPIAFA EMYKIKMGRD LELARLKKLA KEKQGGCGAS

Best Arabidopsis Sequence Match ( AT3G51240.1 )
(BLAST)

001: MAPGTLTELA GESKLNSKFV RDEDERPKVA YNVFSDEIPV ISLAGIDDVD GKRGEICRQI VEACENWGIF QVVDHGVDTN LVADMTRLAR DFFALPPEDK
101: LRFDMSGGKK GGFIVSSHLQ GEAVQDWREI VTYFSYPVRN RDYSRWPDKP EGWVKVTEEY SERLMSLACK LLEVLSEAMG LEKESLTNAC VDMDQKIVVN
201: YYPKCPQPDL TLGLKRHTDP GTITLLLQDQ VGGLQATRDN GKTWITVQPV EGAFVVNLGD HGHFLSNGRF KNADHQAVVN SNSSRLSIAT FQNPAPDATV
301: YPLKVREGEK AILEEPITFA EMYKRKMGRD LELARLKKLA KEERDHKEVD KPVDQIFA

Arabidopsis Description

F3HNaringenin,2-oxoglutarate 3-dioxygenase [Source:UniProtKB/Swiss-Prot;Acc:Q9S818]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.