Factsheet for Bra000713.1-P

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

nucleus 1
mitochondrion 2
cytosol 3
plastid 3

Predictors

GFP

MS/MS

Papers

PPI

Inferred distinct locusB in Crop

locusB	locations
Bra005398.1-P
Bra021926.1-P

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT4G10500.1	Bra005398.1-P	AT2G34710.1	21798944
AT4G10500.1	Bra021926.1-P	AT2G34710.1	21798944

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDX90761	Canola	plastid	99.71	99.71
AT4G10500.1	Thale cress	plastid	83.14	83.38
Bra000712.1-P	Field mustard	cytosol, nucleus, peroxisome	72.29	72.08
Bra037921.1-P	Field mustard	cytosol	72.29	72.08
VIT_02s0025g02960.t01	Wine grape	cytosol	61.71	62.07
VIT_02s0025g02970.t01	Wine grape	cytosol	61.14	61.49
Zm00001d002564_P001	Maize	cytosol, peroxisome, plastid	56.86	56.7
EES12710	Sorghum	cytosol, peroxisome, plastid	56.29	56.13
Os04t0581100-01	Rice	cytosol, peroxisome, plastid	56.29	55.97
TraesCS2A01G394900.1	Wheat	plastid	55.14	55.3
TraesCS2B01G412900.1	Wheat	plastid	54.57	54.73
HORVU2Hr1G093950.12	Barley	peroxisome, plastid	53.43	53.58
Bra029414.1-P	Field mustard	plastid	51.14	52.49
GSMUA_AchrUn_...	Banana	mitochondrion, plastid	57.71	51.79
TraesCS2D01G392900.1	Wheat	plastid	55.71	50.0
Bra009771.1-P	Field mustard	mitochondrion	50.0	41.87
Bra034168.1-P	Field mustard	cytosol	30.29	36.68
Bra038447.1-P	Field mustard	cytosol, nucleus, peroxisome	34.29	35.09
Bra014500.1-P	Field mustard	cytosol	35.71	35.01
Bra005860.1-P	Field mustard	cytosol	36.86	34.68
Bra004867.1-P	Field mustard	cytosol	35.43	34.54
Bra028752.1-P	Field mustard	cytosol	36.57	34.41
Bra000045.1-P	Field mustard	plastid	34.57	34.28
Bra017132.1-P	Field mustard	plastid	34.57	34.18
Bra009358.1-P	Field mustard	cytoskeleton, cytosol, peroxisome	32.57	33.93
Bra012862.1-P	Field mustard	cytosol	33.43	33.43
Bra014716.1-P	Field mustard	cytosol	34.86	33.33
Bra017227.1-P	Field mustard	cytosol	34.57	32.97
Bra036828.1-P	Field mustard	cytosol	33.71	32.96
Bra018076.1-P	Field mustard	cytosol	28.57	32.79
Bra028696.1-P	Field mustard	cytosol	32.0	31.02
Bra038648.1-P	Field mustard	cytosol	26.29	30.98
Bra038647.1-P	Field mustard	cytosol	27.14	30.94
Bra029211.1-P	Field mustard	cytosol	26.86	30.32
Bra037747.1-P	Field mustard	cytosol	26.57	29.62
Bra013652.1-P	Field mustard	cytosol	30.0	29.33
Bra009258.1-P	Field mustard	cytosol, nucleus, peroxisome	22.86	28.99
Bra034861.1-P	Field mustard	cytosol	32.86	28.4
Bra014831.1-P	Field mustard	cytosol	26.0	28.26
Bra019350.1-P	Field mustard	cytosol	28.57	28.01
Bra029212.1-P	Field mustard	cytosol	28.29	23.46
Bra007204.1-P	Field mustard	cytosol	35.71	20.13

Protein Annotations

MapMan:11.8.3.4	Gene3D:2.60.120.330	EnsemblPlantsGene:Bra000713	EnsemblPlants:Bra000713.1	EnsemblPlants:Bra000713.1-P	InterPro:DIOX_N
GO:GO:0002229	GO:GO:0002239	GO:GO:0003674	GO:GO:0003824	GO:GO:0005488	GO:GO:0006950
GO:GO:0007275	GO:GO:0008150	GO:GO:0008152	GO:GO:0009056	GO:GO:0009605	GO:GO:0009607
GO:GO:0009617	GO:GO:0009620	GO:GO:0009719	GO:GO:0009751	GO:GO:0009987	GO:GO:0010150
GO:GO:0016491	GO:GO:0046244	GO:GO:0046872	GO:GO:0055114	InterPro:IPNS-like	InterPro:IPR005123
InterPro:IPR027443	UniProt:M4C935	InterPro:Oxoglu/Fe-dep_dioxygenase	PFAM:PF03171	PFAM:PF14226	PRINTS:PR00682
PFscan:PS51471	PANTHER:PTHR10209	PANTHER:PTHR10209:SF251	SUPFAM:SSF51197	UniParc:UPI000254035B	:

Description

AT4G10500 (E=2e-172) | oxidoreductase, 2OG-Fe(II) oxygenase family protein

Coordinates

chrA03:+:12622001..12626929

Molecular Weight (calculated)

39803.2 Da

IEP (calculated)

6.438

GRAVY (calculated)

-0.280

Length

350 amino acids

Sequence
(BLAST)

001: MAAPLTSKLL VSDFASSVRH IPLTYVRPIS DRPQLSLVEN SGDTIPLIDL RDLYGPNRTK IIRQISHACS TYGFFQIKNH GVSETTVNKM LTVAREFFHQ
101: PEGERMKHYS TDSTKTTRVS TSFNVSADKI LNWRDYLRLH CFPIQDFINE WPENPVSFKE ITAEYATSVR ALVLRLLEAI SESLGLERDH ISNRLGTHAQ
201: HMAFNYYPPC PEPELTYGLP GHKDPTAITV LLQDQVSGLQ VFKDDEWIAV YPIPNTFIVN IGDQMQVISN ERYKSVLHRA VVNTEKERLS IPTFYFPSTD
301: AVISPAQELI DGQTSPAVYK SYPFVEYWDK FWDRSLATAS CLDAFKASTT

Best Arabidopsis Sequence Match ( AT4G10500.1 )
(BLAST)

001: MATSAISKLL VSDFASSVHI PSNYVRPISD RPNLSEVESS GDSIPLIDLR DLHGPNRAVI VQQLASACST YGFFQIKNHG VPDTTVNKMQ TVAREFFHQP
101: ESERVKHYSA DPTKTTRLST SFNVGADKVL NWRDFLRLHC FPIEDFIEEW PSSPISFREV TAEYATSVRA LVLRLLEAIS ESLGLESDHI SNILGKHAQH
201: MAFNYYPPCP EPELTYGLPG HKDPTVITVL LQDQVSGLQV FKDDKWVAVS PIPNTFIVNI GDQMQVISND KYKSVLHRAV VNTENERLSI PTFYFPSTDA
301: VIGPAHELVN EQDSLAIYRT YPFVEYWDKF WNRSLATASC LDAFKAPTT

Arabidopsis Description

DLO1Protein DMR6-LIKE OXYGENASE 1 [Source:UniProtKB/Swiss-Prot;Acc:Q9ZSA8]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.