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Barley
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Barley
Subcellular Localization
min:
: max

 
Winner_takes_all: cytosol

Predictor Summary:
  • nucleus 1
  • peroxisome 1
  • cytosol 3
  • mitochondrion 1
Predictors GFP MS/MS Papers
Winner Takes All:cytosol
Any Predictor:cytosol, mitochondrion, nucleus, peroxisome
BaCelLo:nucleus
MultiLoc:peroxisome
Plant-mPloc:cytosol
PProwler:mitochondrion
WoLF PSORT:cytosol
YLoc:cytosol
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
TraesCS2B01G413000.1 Wheat cytosol, nucleus, peroxisome 95.29 95.29
TraesCS2D01G392800.1 Wheat cytosol 95.0 95.0
TraesCS2A01G395000.1 Wheat cytosol 95.0 95.0
Os04t0581000-01 Rice cytosol 85.88 85.88
KXG26978 Sorghum cytosol 80.88 80.17
GSMUA_Achr8P12320_001 Banana cytosol, nucleus, peroxisome 71.47 71.26
GSMUA_Achr11P... Banana cytosol, nucleus, peroxisome 72.94 70.25
HORVU4Hr1G084810.2 Barley cytosol, peroxisome, plastid 67.65 68.45
VIT_16s0098g00860.t01 Wine grape cytosol, peroxisome, plastid 63.53 63.91
PGSC0003DMT400001570 Potato cytosol 63.24 63.8
VIT_13s0047g00210.t01 Wine grape cytosol 63.24 63.8
Solyc03g080190.2.1 Tomato cytosol, peroxisome, plastid 62.35 62.91
KRH53636 Soybean cytosol 62.06 62.43
KRH64291 Soybean cytosol 61.76 62.13
AT5G24530.1 Thale cress mitochondrion 60.88 60.7
CDY05412 Canola mitochondrion 60.59 60.41
Bra029414.1-P Field mustard plastid 60.0 59.82
CDY05445 Canola plastid 60.0 59.82
CDX88109 Canola mitochondrion 59.71 59.53
CDX80450 Canola mitochondrion 59.41 59.24
PGSC0003DMT400069218 Potato cytosol 58.53 58.19
Solyc06g073080.2.1 Tomato plastid 53.82 57.19
HORVU2Hr1G093950.12 Barley peroxisome, plastid 50.29 49.0
Bra009771.1-P Field mustard mitochondrion 57.65 46.89
HORVU7Hr1G033360.11 Barley cytosol 38.82 36.46
HORVU6Hr1G056710.2 Barley cytosol, peroxisome 7.65 36.11
HORVU4Hr1G089330.2 Barley plastid 45.88 35.86
HORVU4Hr1G056500.2 Barley cytosol, peroxisome, plastid 39.12 35.85
HORVU1Hr1G015050.7 Barley cytosol, peroxisome 37.65 35.26
HORVU4Hr1G089480.1 Barley cytosol 36.18 34.94
HORVU6Hr1G010980.1 Barley cytosol 34.71 34.1
HORVU4Hr1G081500.1 Barley cytosol, peroxisome 21.47 33.64
HORVU2Hr1G117810.43 Barley cytosol, nucleus, peroxisome 31.76 33.23
HORVU7Hr1G025650.1 Barley cytosol 33.53 32.85
HORVU7Hr1G122350.2 Barley cytosol, peroxisome, plastid 32.65 32.84
HORVU2Hr1G108800.1 Barley cytosol 19.41 32.84
HORVU2Hr1G108680.1 Barley cytosol 19.41 32.84
HORVU4Hr1G081480.3 Barley plasma membrane 32.35 32.16
HORVU4Hr1G000050.3 Barley plastid 37.94 31.93
HORVU3Hr1G087570.4 Barley cytosol, peroxisome, plastid 38.24 31.78
HORVU4Hr1G081550.2 Barley peroxisome, plastid 26.18 31.34
HORVU2Hr1G117900.3 Barley cytosol, mitochondrion, peroxisome 28.82 30.82
HORVU4Hr1G081490.1 Barley cytosol, peroxisome 32.35 30.73
HORVU7Hr1G060070.9 Barley cytosol, peroxisome 35.88 30.5
HORVU5Hr1G011540.3 Barley cytosol 34.12 30.29
HORVU1Hr1G071670.2 Barley cytosol 35.29 29.06
HORVU3Hr1G077080.2 Barley cytosol, peroxisome, plastid 30.29 28.69
HORVU5Hr1G094280.1 Barley cytosol, peroxisome 30.59 26.94
HORVU5Hr1G048180.23 Barley cytosol, nucleus, peroxisome 30.29 26.61
HORVU2Hr1G110130.3 Barley mitochondrion 33.24 25.45
HORVU6Hr1G080360.1 Barley plastid 25.0 24.29
Protein Annotations
Gene3D:2.60.120.330MapMan:9.2.2.3.1InterPro:DIOX_NGO:GO:0003674GO:GO:0003824GO:GO:0005488
GO:GO:0008150GO:GO:0008152GO:GO:0016491GO:GO:0046872GO:GO:0055114EnsemblPlantsGene:HORVU0Hr1G005300
EnsemblPlants:HORVU0Hr1G005300.1InterPro:IPNS-likeInterPro:IPR005123InterPro:IPR027443UniProt:M0XMY9InterPro:Oxoglu/Fe-dep_dioxygenase
PFAM:PF03171PFAM:PF14226PFscan:PS51471PANTHER:PTHR10209PANTHER:PTHR10209:SF389SUPFAM:SSF51197
UniParc:UPI0001B63C41SEG:seg::::
Description
No Description!
Coordinates
chrchrUn:+:29756485..29763312
Molecular Weight (calculated)
38660.0 Da
IEP (calculated)
5.129
GRAVY (calculated)
-0.326
Length
340 amino acids
Sequence
(BLAST)
001: MAYQLLSTVA HRDTLPEGYT RPENDRPQLA DVVTDTNIPL IDLASLDKHS IIAEIDQACR TYGFFQIVNH GISEELLEKV MAVGLEFFRL PPEEKAKLYS
101: DEPSKKIRLS TSFNVRKETV HNWRDYLRLH CHPLEEFVPD WPSNPETFKE IISTYCREVR LLGLRLLGAI SLGLGLDEDY IEKVLGEQEQ HMAVNYYPRC
201: PEPDLTYGLP KHTDPNALTI LLMDPHVSGL QVLKGGVQWI AVDPRPNALV VNLGDQLQAL SNGAYKSVWH RAVVNASRER LSVASFLCPC NSAVIGPAAK
301: LVADGDEPVY RSYTYDEYYK KFWSRNLDQD HCLELFTDQN
Best Arabidopsis Sequence Match ( AT5G24530.1 )
(BLAST)
001: MAAKLISTGF RHTTLPENYV RPISDRPRLS EVSQLEDFPL IDLSSTDRSF LIQQIHQACA RFGFFQVINH GVNKQIIDEM VSVAREFFSM SMEEKMKLYS
101: DDPTKTTRLS TSFNVKKEEV NNWRDYLRLH CYPIHKYVNE WPSNPPSFKE IVSKYSREVR EVGFKIEELI SESLGLEKDY MKKVLGEQGQ HMAVNYYPPC
201: PEPELTYGLP AHTDPNALTI LLQDTTVCGL QILIDGQWFA VNPHPDAFVI NIGDQLQALS NGVYKSVWHR AVTNTENPRL SVASFLCPAD CAVMSPAKPL
301: WEAEDDETKP VYKDFTYAEY YKKFWSRNLD QEHCLENFLN N
Arabidopsis Description
DMR6Protein DOWNY MILDEW RESISTANCE 6 [Source:UniProtKB/Swiss-Prot;Acc:Q9FLV0]
SUBAcon: [mitochondrion]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.