Subcellular Localization
min:
: max
Winner_takes_all: plastid
Predictor Summary:
Predictor Summary:
- plastid 3
- mitochondrion 1
- peroxisome 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred distinct locusB in Crop
Inferred from Arabidopsis experimental PPI
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| HORVU6Hr1G056710.2 | Barley | cytosol, peroxisome | 20.57 | 100.0 |
| TraesCS6A01G331400.1 | Wheat | plastid | 69.43 | 72.75 |
| TraesCS6D01G310700.1 | Wheat | plastid | 69.43 | 72.75 |
| TraesCS6B01G362100.1 | Wheat | cytosol | 68.57 | 71.86 |
| Os02t0767300-01 | Rice | cytosol | 58.0 | 61.33 |
| Zm00001d018181_P001 | Maize | endoplasmic reticulum, nucleus | 52.57 | 58.41 |
| Zm00001d018184_P001 | Maize | endoplasmic reticulum | 52.57 | 58.41 |
| EES07584 | Sorghum | cytosol | 55.14 | 58.13 |
| EES00073 | Sorghum | cytosol | 41.43 | 47.08 |
| GSMUA_Achr3P07030_001 | Banana | cytosol | 42.86 | 45.05 |
| GSMUA_Achr10P... | Banana | cytosol | 39.71 | 44.41 |
| GSMUA_Achr10P... | Banana | cytosol | 42.29 | 44.18 |
| GSMUA_Achr8P23330_001 | Banana | cytosol | 40.86 | 42.94 |
| VIT_18s0001g03470.t01 | Wine grape | cytosol | 39.43 | 42.86 |
| Bra009358.1-P | Field mustard | cytoskeleton, cytosol, peroxisome | 40.57 | 42.26 |
| CDX69931 | Canola | cytoskeleton, cytosol, peroxisome | 40.57 | 42.26 |
| CDY21556 | Canola | cytoskeleton, cytosol, peroxisome | 40.57 | 42.26 |
| AT5G08640.1 | Thale cress | cytosol | 39.71 | 41.37 |
| VIT_18s0001g03490.t01 | Wine grape | cytosol | 39.43 | 41.19 |
| Solyc11g013110.1.1 | Tomato | cytosol, plastid | 40.86 | 40.62 |
| PGSC0003DMT400036565 | Potato | cytosol | 40.57 | 40.34 |
| KRH18787 | Soybean | cytosol | 37.71 | 39.52 |
| KRH53203 | Soybean | cytosol | 36.86 | 38.74 |
| CDY41520 | Canola | cytosol | 26.57 | 37.65 |
| KRH16579 | Soybean | cytosol, mitochondrion | 32.0 | 37.09 |
| CDY41522 | Canola | cytosol | 30.86 | 36.36 |
| Bra038648.1-P | Field mustard | cytosol | 30.86 | 36.36 |
| Bra018076.1-P | Field mustard | cytosol | 31.43 | 36.07 |
| CDY48154 | Canola | cytosol | 31.14 | 35.74 |
| AT5G63590.1 | Thale cress | cytoskeleton, cytosol, peroxisome | 31.43 | 35.71 |
| CDY39565 | Canola | cytosol | 30.57 | 35.08 |
| AT5G63580.1 | Thale cress | cytoskeleton, cytosol, peroxisome | 24.57 | 34.4 |
| AT5G63595.1 | Thale cress | cytoskeleton, cytosol, peroxisome | 26.57 | 33.33 |
| Bra037747.1-P | Field mustard | cytosol | 29.71 | 33.12 |
| CDY69013 | Canola | cytosol | 28.86 | 32.9 |
| CDX81188 | Canola | cytosol | 30.0 | 32.81 |
| CDY39860 | Canola | cytosol | 28.86 | 32.69 |
| Bra038647.1-P | Field mustard | cytosol | 28.57 | 32.57 |
| CDY31361 | Canola | cytosol | 28.29 | 31.94 |
| CDX97750 | Canola | cytosol | 20.0 | 31.67 |
| Bra029211.1-P | Field mustard | cytosol | 28.0 | 31.61 |
| AT5G43935.1 | Thale cress | cytosol | 26.29 | 31.4 |
| HORVU1Hr1G015050.7 | Barley | cytosol, peroxisome | 31.71 | 30.58 |
| HORVU4Hr1G056500.2 | Barley | cytosol, peroxisome, plastid | 32.29 | 30.46 |
| AT5G63600.2 | Thale cress | cytosol | 28.0 | 30.06 |
| HORVU5Hr1G094280.1 | Barley | cytosol, peroxisome | 32.86 | 29.79 |
| HORVU3Hr1G087570.4 | Barley | cytosol, peroxisome, plastid | 33.43 | 28.61 |
| HORVU4Hr1G084810.2 | Barley | cytosol, peroxisome, plastid | 26.57 | 27.68 |
| HORVU5Hr1G048180.23 | Barley | cytosol, nucleus, peroxisome | 29.71 | 26.87 |
| HORVU7Hr1G025650.1 | Barley | cytosol | 26.57 | 26.8 |
| HORVU2Hr1G093950.12 | Barley | peroxisome, plastid | 25.14 | 25.21 |
| HORVU7Hr1G033360.11 | Barley | cytosol | 26.0 | 25.14 |
| HORVU0Hr1G005300.1 | Barley | cytosol | 24.29 | 25.0 |
| Bra029212.1-P | Field mustard | cytosol | 29.43 | 24.41 |
| CDY31363 | Canola | cytosol | 29.14 | 24.17 |
| HORVU2Hr1G108800.1 | Barley | cytosol | 13.43 | 23.38 |
| HORVU2Hr1G108680.1 | Barley | cytosol | 13.43 | 23.38 |
| HORVU2Hr1G117810.43 | Barley | cytosol, nucleus, peroxisome | 21.14 | 22.77 |
| HORVU7Hr1G060070.9 | Barley | cytosol, peroxisome | 25.71 | 22.5 |
| HORVU2Hr1G117900.3 | Barley | cytosol, mitochondrion, peroxisome | 20.29 | 22.33 |
| HORVU6Hr1G010980.1 | Barley | cytosol | 22.0 | 22.25 |
| HORVU4Hr1G000050.3 | Barley | plastid | 25.43 | 22.03 |
| HORVU4Hr1G081480.3 | Barley | plasma membrane | 21.43 | 21.93 |
| HORVU7Hr1G122350.2 | Barley | cytosol, peroxisome, plastid | 21.14 | 21.89 |
| HORVU4Hr1G081490.1 | Barley | cytosol, peroxisome | 22.0 | 21.51 |
| HORVU5Hr1G011540.3 | Barley | cytosol | 23.43 | 21.41 |
| HORVU4Hr1G081500.1 | Barley | cytosol, peroxisome | 13.14 | 21.2 |
| HORVU2Hr1G110130.3 | Barley | mitochondrion | 26.86 | 21.17 |
| HORVU4Hr1G081550.2 | Barley | peroxisome, plastid | 17.14 | 21.13 |
| VIT_18s0001g03510.t01 | Wine grape | cytosol | 40.86 | 21.03 |
| HORVU3Hr1G077080.2 | Barley | cytosol, peroxisome, plastid | 21.43 | 20.89 |
| HORVU4Hr1G089480.1 | Barley | cytosol | 20.57 | 20.45 |
| HORVU1Hr1G071670.2 | Barley | cytosol | 23.71 | 20.1 |
| HORVU4Hr1G089330.2 | Barley | plastid | 22.86 | 18.39 |
| CDY41521 | Canola | cytosol, mitochondrion | 0.0 | 0.0 |
Protein Annotations
| Gene3D:2.60.120.330 | MapMan:9.2.2.5.1 | UniProt:A0A287UVN6 | InterPro:DIOX_N | GO:GO:0003674 | GO:GO:0003824 |
| GO:GO:0005488 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0016491 | GO:GO:0046872 | GO:GO:0055114 |
| EnsemblPlantsGene:HORVU6Hr1G080360 | EnsemblPlants:HORVU6Hr1G080360.1 | InterPro:IPNS-like | InterPro:IPR005123 | InterPro:IPR027443 | InterPro:Oxoglu/Fe-dep_dioxygenase |
| PFAM:PF03171 | PFAM:PF14226 | PFscan:PS51471 | PANTHER:PTHR10209 | PANTHER:PTHR10209:SF165 | SUPFAM:SSF51197 |
| UniParc:UPI000B477ADC | SEG:seg | : | : | : | : |
Description
No Description!
Coordinates
chrchr6H:-:541634706..541638114
Molecular Weight (calculated)
38047.4 Da
IEP (calculated)
7.622
GRAVY (calculated)
-0.286
Length
350 amino acids
Sequence
(BLAST)
(BLAST)
001: LFPPLKPSCK SGSHTAAPLI APPNRSPLIL RPARTAMRAC SRGPSRLTTQ ADARGDRAGI MAGAQSVQAL ASSLGALPSE FVWPEHEQPR ATTFRGAAPP
101: QIPVVDMSSP DAGRRMAEAA AEWGIFQVVG HGVPAEAVAE LQRVGREFFA LPQEEKQRYA MDPAEGRTEG YGSTLRRRGL EGKKAWADFL FHNVAPPAAV
201: NHAAWPENPR GYRQANEAYC GHMQRLTREL FERLSAELGL EGGAMAEAFG GDDVVLLQKI NFYPPCPQPE LALGLAPHTD LSTLTVLLPN EVQGLQVFKD
301: GHWYNVEYVP GGLIIHVGDQ IEASAGTYAP DRLAPSRQLF HRLTRRLICV
101: QIPVVDMSSP DAGRRMAEAA AEWGIFQVVG HGVPAEAVAE LQRVGREFFA LPQEEKQRYA MDPAEGRTEG YGSTLRRRGL EGKKAWADFL FHNVAPPAAV
201: NHAAWPENPR GYRQANEAYC GHMQRLTREL FERLSAELGL EGGAMAEAFG GDDVVLLQKI NFYPPCPQPE LALGLAPHTD LSTLTVLLPN EVQGLQVFKD
301: GHWYNVEYVP GGLIIHVGDQ IEASAGTYAP DRLAPSRQLF HRLTRRLICV
001: MEVERVQDIS SSSLLTEAIP LEFIRSEKEQ PAITTFRGPT PAIPVVDLSD PDEESVRRAV VKASEEWGLF QVVNHGIPTE LIRRLQDVGR KFFELPSSEK
101: ESVAKPEDSK DIEGYGTKLQ KDPEGKKAWV DHLFHRIWPP SCVNYRFWPK NPPEYREVNE EYAVHVKKLS ETLLGILSDG LGLKRDALKE GLGGEMAEYM
201: MKINYYPPCP RPDLALGVPA HTDLSGITLL VPNEVPGLQV FKDDHWFDAE YIPSAVIVHI GDQILRLSNG RYKNVLHRTT VDKEKTRMSW PVFLEPPREK
301: IVGPLPELTG DDNPPKFKPF AFKDYSYRKL NKLPLD
101: ESVAKPEDSK DIEGYGTKLQ KDPEGKKAWV DHLFHRIWPP SCVNYRFWPK NPPEYREVNE EYAVHVKKLS ETLLGILSDG LGLKRDALKE GLGGEMAEYM
201: MKINYYPPCP RPDLALGVPA HTDLSGITLL VPNEVPGLQV FKDDHWFDAE YIPSAVIVHI GDQILRLSNG RYKNVLHRTT VDKEKTRMSW PVFLEPPREK
301: IVGPLPELTG DDNPPKFKPF AFKDYSYRKL NKLPLD
Arabidopsis Description
FLS1Flavonol synthase/flavanone 3-hydroxylase [Source:UniProtKB/Swiss-Prot;Acc:Q96330]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.