Factsheet for HORVU6Hr1G048650.1

Subcellular Localization

min:

: max

Winner_takes_all: endoplasmic reticulum, plasma membrane

Predictor Summary:

extracellular 3
endoplasmic reticulum 4
vacuole 3
plasma membrane 4
golgi 3
plastid 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	endoplasmic reticulum, plasma membrane
Any Predictor:	plastid, secretory
iPSORT:	secretory
MultiLoc:	endoplasmic reticulum
Predotar:	secretory
TargetP:	secretory
WoLF PSORT:	plastid
YLoc:	plasma membrane

PPI

Inferred distinct locusB in Crop

locusB	locations
HORVU1Hr1G004830.1
HORVU1Hr1G089540.1
HORVU2Hr1G004170.4
HORVU2Hr1G005220.3
HORVU2Hr1G116390.2
HORVU5Hr1G112670.1
HORVU6Hr1G056710.2
HORVU6Hr1G080360.1

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT5G42800.1	HORVU5Hr1G112670.1	AT3G55120.1	10536025
AT5G42800.1	HORVU6Hr1G056710.2	AT5G08640.1	18467451
AT5G42800.1	HORVU6Hr1G080360.1	AT5G08640.1	18467451
AT5G42800.1	HORVU1Hr1G004830.1	AT5G13930.1	10536025
AT5G42800.1	HORVU1Hr1G089540.1	AT5G13930.1	10536025
AT5G42800.1	HORVU2Hr1G004170.4	AT5G13930.1	10536025
AT5G42800.1	HORVU2Hr1G005220.3	AT5G13930.1	10536025
AT5G42800.1	HORVU2Hr1G116390.2	AT5G13930.1	10536025
AT5G42800.1	HORVU1Hr1G004830.1	AT5G13930.1	21669202
AT5G42800.1	HORVU1Hr1G089540.1	AT5G13930.1	21669202
AT5G42800.1	HORVU2Hr1G004170.4	AT5G13930.1	21669202
AT5G42800.1	HORVU2Hr1G005220.3	AT5G13930.1	21669202
AT5G42800.1	HORVU2Hr1G116390.2	AT5G13930.1	21669202

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
HORVU6Hr1G047380.1	Barley	peroxisome	66.67	67.09
HORVU3Hr1G056560.2	Barley	cytosol	67.3	30.23
KRH05851	Soybean	extracellular	22.01	28.23
KRH15169	Soybean	plastid	44.03	20.11
VIT_18s0001g12800.t01	Wine grape	endoplasmic reticulum, golgi, plasma membrane, plastid	46.54	19.73
KRH05848	Soybean	plastid	43.4	19.49
AT5G42800.1	Thale cress	cytosol	45.28	18.85
CDX95155	Canola	cytosol	43.4	17.92
KRH71611	Soybean	nucleus	37.74	17.7
Bra027457.1-P	Field mustard	cytosol	42.77	17.66
CDY52372	Canola	cytosol	42.77	17.66
PGSC0003DMT400009287	Potato	cytosol	41.51	17.28
Solyc02g085020.2.1	Tomato	cytosol	40.25	16.89
VIT_04s0023g02090.t01	Wine grape	cytosol	16.98	16.77
HORVU7Hr1G030830.1	Barley	cytosol	14.47	12.23
HORVU2Hr1G123890.5	Barley	cytosol	24.53	10.96
HORVU2Hr1G108250.2	Barley	cytosol	23.27	10.88
HORVU7Hr1G101860.2	Barley	cytosol	22.64	10.81
CDY21246	Canola	cytosol	16.35	10.66
HORVU2Hr1G108180.1	Barley	cytosol	20.13	9.36
HORVU2Hr1G033610.7	Barley	mitochondrion	18.24	8.48
HORVU2Hr1G033540.4	Barley	mitochondrion	16.98	8.23
HORVU4Hr1G089470.2	Barley	endoplasmic reticulum, mitochondrion, peroxisome	17.61	8.14
HORVU2Hr1G108110.19	Barley	mitochondrion	21.38	7.91
HORVU2Hr1G033520.1	Barley	mitochondrion	16.35	7.78
HORVU7Hr1G113350.5	Barley	plastid	16.35	6.79
HORVU2Hr1G108260.3	Barley	cytosol	8.81	3.34

Protein Annotations

EnsemblPlants:HORVU6Hr1G048650.1	EnsemblPlantsGene:HORVU6Hr1G048650	Gene3D:3.40.50.720	GO:GO:0005575	GO:GO:0016020	GO:GO:0016021
InterPro:NAD(P)-bd_dom_sf	PANTHER:PTHR10366	PANTHER:PTHR10366:SF276	SEG:seg	SUPFAM:SSF51735	TMHMM:TMhelix
UniParc:UPI000B46FD24	UniProt:A0A287U402	MapMan:35.1	:	:	:

Description

No Description!

Coordinates

chrchr6H:+:296869908..296871099

Molecular Weight (calculated)

17949.6 Da

IEP (calculated)

4.667

GRAVY (calculated)

0.092

Length

159 amino acids

Sequence
(BLAST)

001: MEYASENGLD FISIIPTLVV ATFLSAGIPP SLVTALALIT GNETHYSILK QVQLVHLDDL CDAMTFLFEH REANCRYIYS HDDTIHVLAR MLQDRFPEYD
101: IPKKFAGVDD NLQPIHLSSK KPERRAWGLE VAWWWMEEEV EGHAMTVAAA GAVAAMLIY

Best Arabidopsis Sequence Match ( AT5G42800.1 )
(BLAST)

001: MVSQKETVCV TGASGFIGSW LVMRLLERGY FVRATVRDPG NLKKVQHLLD LPNAKTLLTL WKADLSEEGS YDDAINGCDG VFHVATPMDF ESKDPENEVI
101: KPTVNGMLGI MKACVKAKTV RRFVFTSSAG TVNVEEHQKN VYDENDWSDL EFIMSKKMTG WMYFVSKTLA EKAAWDFAEE KGLDFISIIP TLVVGPFITT
201: SMPPSLITAL SPITRNEAHY SIIRQGQYVH LDDLCNAHIF LYEQAAAKGR YICSSHDATI LTISKFLRPK YPEYNVPSTF EGVDENLKSI EFSSKKLTDM
301: GFNFKYSLEE MFIESIETCR QKGFLPVSLS YQSISEIKTK NENIDVKTGD GLTDGMKPCN KTETGITGER TDAPMLAQQM CA

Arabidopsis Description

DFRADihydroflavonol reductase [Source:UniProtKB/TrEMBL;Acc:B1GV15]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.