Factsheet for HORVU1Hr1G004830.1

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

mitochondrion 2
cytosol 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion
iPSORT:	mitochondrion
MultiLoc:	cytosol
TargetP:	mitochondrion
YLoc:	cytosol

PPI

Inferred distinct locusB in Crop

locusB	locations
HORVU2Hr1G110130.3
HORVU3Hr1G056560.2
HORVU5Hr1G112670.1
HORVU6Hr1G047380.1
HORVU6Hr1G048650.1
HORVU6Hr1G056710.2
HORVU6Hr1G080360.1

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT5G13930.1	HORVU2Hr1G110130.3	AT3G51240.1	10536025
AT5G13930.1	HORVU5Hr1G112670.1	AT3G55120.1	10536025
AT5G13930.1	HORVU6Hr1G056710.2	AT5G08640.1	18467451
AT5G13930.1	HORVU6Hr1G080360.1	AT5G08640.1	18467451
AT5G13930.1	HORVU6Hr1G056710.2	AT5G08640.1	21669202
AT5G13930.1	HORVU6Hr1G080360.1	AT5G08640.1	21669202
AT5G13930.1	HORVU3Hr1G056560.2	AT5G42800.1	10536025
AT5G13930.1	HORVU6Hr1G047380.1	AT5G42800.1	10536025
AT5G13930.1	HORVU6Hr1G048650.1	AT5G42800.1	10536025
AT5G13930.1	HORVU3Hr1G056560.2	AT5G42800.1	21669202
AT5G13930.1	HORVU6Hr1G047380.1	AT5G42800.1	21669202
AT5G13930.1	HORVU6Hr1G048650.1	AT5G42800.1	21669202
AT5G13930.1	HORVU6Hr1G056710.2	AT5G63590.1	18467451
AT5G13930.1	HORVU6Hr1G080360.1	AT5G63590.1	18467451

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS1A01G032300.1	Wheat	cytosol	95.21	94.97
TraesCS1B01G041000.1	Wheat	cytosol	94.46	94.94
TraesCS1A01G032100.1	Wheat	cytosol	94.21	94.68
TraesCS1B01G040500.1	Wheat	cytosol	94.46	93.98
TraesCS1B01G040000.1	Wheat	cytosol, mitochondrion	93.45	93.92
TraesCS1B01G040300.1	Wheat	cytosol, mitochondrion	93.45	93.92
TraesCS1D01G033800.1	Wheat	cytosol	93.95	93.72
TraesCS1D01G033600.1	Wheat	cytosol	93.95	93.48
TraesCS1B01G040100.1	Wheat	cytosol	92.95	93.42
TraesCS1B01G040200.1	Wheat	cytosol, mitochondrion	93.2	92.04
HORVU1Hr1G089540.1	Barley	mitochondrion	86.4	85.96
HORVU2Hr1G005220.3	Barley	cytosol	78.34	78.73
HORVU2Hr1G116390.2	Barley	cytosol	78.59	78.39
KRH42776	Soybean	cytosol	48.87	76.08
GSMUA_Achr6P10910_001	Banana	cytosol, mitochondrion	62.72	75.91
GSMUA_Achr6P16370_001	Banana	cytosol, mitochondrion, plastid	59.7	75.72
AT5G13930.1	Thale cress	cytosol	75.06	75.44
CDX78547	Canola	cytosol	74.56	75.13
GSMUA_Achr10P...	Banana	cytosol	61.21	75.0
CDX69618	Canola	cytosol	74.56	74.94
VIT_14s0068g00930.t01	Wine grape	cytosol	74.06	74.81
CDX70528	Canola	cytosol	74.56	74.75
CDY09836	Canola	cytosol	74.31	74.68
KRH37579	Soybean	cytosol	72.8	74.48
Bra008792.1-P	Field mustard	cytosol	74.06	74.43
VIT_14s0068g00920.t01	Wine grape	cytosol	73.55	74.3
Solyc05g053550.2.1	Tomato	cytosol, mitochondrion	72.8	74.29
Bra006224.1-P	Field mustard	cytosol	74.06	74.24
CDX91090	Canola	cytosol	74.06	74.24
KRH75544	Soybean	cytosol	72.54	74.23
PGSC0003DMT400049165	Potato	cytosol, mitochondrion	72.54	74.04
KRH58872	Soybean	cytosol	72.29	73.97
KRH42783	Soybean	cytosol	72.29	73.97
KRH42775	Soybean	cytosol	72.29	73.97
KRH42759	Soybean	cytosol	72.29	73.97
KRH42758	Soybean	cytosol	72.29	73.97
EES14634	Sorghum	cytosol	74.06	73.87
Solyc09g091510.2.1	Tomato	cytosol, extracellular	72.29	73.78
KRH71115	Soybean	cytosol	72.04	73.71
KRH42780	Soybean	cytosol	72.04	73.71
KRH42778	Soybean	cytosol	72.04	73.71
KRH42757	Soybean	cytosol	72.04	73.71
Bra023441.1-P	Field mustard	cytosol	73.05	73.6
PGSC0003DMT400076178	Potato	cytosol	72.04	73.52
VIT_05s0136g00260.t01	Wine grape	cytosol	71.79	73.26
Os07t0214900-00	Rice	cytosol	74.31	73.2
KRH42760	Soybean	cytosol	71.54	73.2
Bra036307.1-P	Field mustard	cytosol	71.54	72.26
KRG94730	Soybean	cytosol	71.03	72.12
HORVU2Hr1G004170.4	Barley	plastid	78.59	72.06
CDY51056	Canola	cytosol	71.28	71.83
CDY05664	Canola	cytosol	71.28	71.83
Bra020688.1-P	Field mustard	cytosol	71.03	71.57
KRH77699	Soybean	endoplasmic reticulum	70.03	71.47
KRH27737	Soybean	cytosol	69.77	71.21
PGSC0003DMT400076179	Potato	cytosol	67.0	70.18
CDY07114	Canola	cytosol	70.03	67.8
GSMUA_Achr10P...	Banana	mitochondrion	57.18	66.18
CDY05666	Canola	mitochondrion	63.22	60.05
HORVU3Hr1G006040.1	Barley	cytosol	54.66	54.52
HORVU6Hr1G055000.1	Barley	cytosol, mitochondrion	48.36	48.48
HORVU4Hr1G003250.1	Barley	cytosol	50.13	47.49
HORVU2Hr1G003280.1	Barley	cytosol	46.6	46.6
HORVU6Hr1G074060.2	Barley	cytosol	47.1	46.4
HORVU1Hr1G064330.1	Barley	cytosol	45.59	45.82
HORVU7Hr1G024480.2	Barley	cytosol	45.09	45.43
HORVU7Hr1G009190.1	Barley	cytosol	43.83	45.08
HORVU6Hr1G003020.2	Barley	cytosol	45.84	44.07
HORVU2Hr1G002640.1	Barley	cytosol	43.32	43.65
HORVU5Hr1G093950.1	Barley	cytosol	40.05	39.45
HORVU7Hr1G020920.2	Barley	cytosol, peroxisome	42.57	36.42
HORVU5Hr1G000690.2	Barley	cytosol, peroxisome	39.29	34.14
HORVU1Hr1G042510.2	Barley	cytosol	37.28	30.45

Protein Annotations

KEGG:00941+2.3.1.74	Gene3D:3.40.47.10	MapMan:9.2.2.1.1.1	UniProt:A0A287EIL6	InterPro:Chalcone/stilbene_synth_C	InterPro:Chalcone/stilbene_synthase_AS
InterPro:Chalcone/stilbene_synthase_N	GO:GO:0003674	GO:GO:0003824	GO:GO:0008150	GO:GO:0008152	GO:GO:0009058
GO:GO:0016740	GO:GO:0016746	GO:GO:0016747	EnsemblPlantsGene:HORVU1Hr1G004830	EnsemblPlants:HORVU1Hr1G004830.1	InterPro:IPR016039
PFAM:PF00195	PFAM:PF02797	PIRSF:PIRSF000451	ScanProsite:PS00441	PANTHER:PTHR11877	PANTHER:PTHR11877:SF44
InterPro:Polyketide_synthase_type-III	SUPFAM:SSF53901	TMHMM:TMhelix	InterPro:Thiolase-like	UniParc:UPI000B46F1D0	SEG:seg

Description

No Description!

Coordinates

chrchr1H:-:10080270..10081470

Molecular Weight (calculated)

43214.4 Da

IEP (calculated)

6.455

GRAVY (calculated)

-0.020

Length

397 amino acids

Sequence
(BLAST)

001: SMAGAVKLEE VRRAQRAVGL ATVLAIGTAV PANCVYQATY PDYYFRVTKS DHLADLKEKF ERMCEKSTIR KRHMHLTEDI LKKHPSLCSH MEPSLDTRHE
101: IVVVEVPKLG KEAAERAIKE WGQPLSKITH VIFCTTSGVD MPGADYQLTR LLGLSPTVKR LMMYQQGCFG GATVLRMAKD IAENNRGARV LIVCSEITAM
201: AFRGPSKSHL DSLVGHALFG DGAAAAIIGA DPDEPLEKPL FQLVSASQTI LPESEGAING HLTEAGLTIH LLKDVPGLIS QNIEQALEDA FKPLGIHDWN
301: SIFWIAHPGG PAILDMVEEK VGLDMERMRA SREVLSEYGN MSSACVLFVL DVMRKSSSHD GHATTGEGKE WGVLFGFGPG LTVETLVLYS APIVATA

Best Arabidopsis Sequence Match ( AT1G02050.1 )
(BLAST)

001: MSNSRMNGVE KLSSKSTRRV ANAGKATLLA LGKAFPSQVV PQENLVEGFL RDTKCDDAFI KEKLEHLCKT TTVKTRYTVL TREILAKYPE LTTEGSPTIK
101: QRLEIANEAV VEMALEASLG CIKEWGRPVE DITHIVYVSS SEIRLPGGDL YLSAKLGLRN DVNRVMLYFL GCYGGVTGLR VAKDIAENNP GSRVLLTTSE
201: TTILGFRPPN KARPYDLVGA ALFGDGAAAV IIGADPRECE APFMELHYAV QQFLPGTQNV IEGRLTEEGI NFKLGRDLPQ KIEENIEEFC KKLMGKAGDE
301: SMEFNDMFWA VHPGGPAILN RLETKLKLEK EKLESSRRAL VDYGNVSSNT ILYVMEYMRD ELKKKGDAAQ EWGLGLAFGP GITFEGLLIR SLTSS

Arabidopsis Description

PKSAType III polyketide synthase A [Source:UniProtKB/Swiss-Prot;Acc:O23674]
SUBAcon: [mitochondrion]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.