Factsheet for HORVU6Hr1G047380.1

Subcellular Localization

min:

: max

Winner_takes_all: peroxisome

Predictor Summary:

peroxisome 3
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	peroxisome
Any Predictor:	mitochondrion, peroxisome
MultiLoc:	peroxisome
TargetP:	mitochondrion
WoLF PSORT:	peroxisome
YLoc:	peroxisome

PPI

Inferred distinct locusB in Crop

locusB	locations
HORVU1Hr1G004830.1
HORVU1Hr1G089540.1
HORVU2Hr1G004170.4
HORVU2Hr1G005220.3
HORVU2Hr1G116390.2
HORVU5Hr1G112670.1
HORVU6Hr1G056710.2
HORVU6Hr1G080360.1

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT5G42800.1	HORVU5Hr1G112670.1	AT3G55120.1	10536025
AT5G42800.1	HORVU6Hr1G056710.2	AT5G08640.1	18467451
AT5G42800.1	HORVU6Hr1G080360.1	AT5G08640.1	18467451
AT5G42800.1	HORVU1Hr1G004830.1	AT5G13930.1	10536025
AT5G42800.1	HORVU1Hr1G089540.1	AT5G13930.1	10536025
AT5G42800.1	HORVU2Hr1G004170.4	AT5G13930.1	10536025
AT5G42800.1	HORVU2Hr1G005220.3	AT5G13930.1	10536025
AT5G42800.1	HORVU2Hr1G116390.2	AT5G13930.1	10536025
AT5G42800.1	HORVU1Hr1G004830.1	AT5G13930.1	21669202
AT5G42800.1	HORVU1Hr1G089540.1	AT5G13930.1	21669202
AT5G42800.1	HORVU2Hr1G004170.4	AT5G13930.1	21669202
AT5G42800.1	HORVU2Hr1G005220.3	AT5G13930.1	21669202
AT5G42800.1	HORVU2Hr1G116390.2	AT5G13930.1	21669202

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
HORVU6Hr1G048650.1	Barley	endoplasmic reticulum, plasma membrane	67.09	66.67
HORVU3Hr1G056560.2	Barley	cytosol	67.09	29.94
KRH05851	Soybean	extracellular	20.89	26.61
KRH15169	Soybean	plastid	46.2	20.98
VIT_04s0023g02090.t01	Wine grape	cytosol	20.89	20.5
VIT_18s0001g12800.t01	Wine grape	endoplasmic reticulum, golgi, plasma membrane, plastid	47.47	20.0
KRH05848	Soybean	plastid	43.67	19.49
AT5G42800.1	Thale cress	cytosol	46.84	19.37
CDX95155	Canola	cytosol	46.2	18.96
Bra027457.1-P	Field mustard	cytosol	45.57	18.7
CDY52372	Canola	cytosol	45.57	18.7
PGSC0003DMT400009287	Potato	cytosol	43.67	18.06
Solyc02g085020.2.1	Tomato	cytosol	42.41	17.68
KRH71611	Soybean	nucleus	37.34	17.4
HORVU7Hr1G030830.1	Barley	cytosol	15.19	12.77
CDY21246	Canola	cytosol	18.99	12.3
HORVU7Hr1G101860.2	Barley	cytosol	24.68	11.71
HORVU2Hr1G123890.5	Barley	cytosol	24.05	10.67
HORVU2Hr1G108250.2	Barley	cytosol	22.15	10.29
HORVU2Hr1G108180.1	Barley	cytosol	19.62	9.06
HORVU2Hr1G108110.19	Barley	mitochondrion	23.42	8.6
HORVU4Hr1G089470.2	Barley	endoplasmic reticulum, mitochondrion, peroxisome	17.72	8.14
HORVU2Hr1G033520.1	Barley	mitochondrion	17.09	8.08
HORVU2Hr1G033540.4	Barley	mitochondrion	16.46	7.93
HORVU2Hr1G033610.7	Barley	mitochondrion	17.09	7.89
HORVU7Hr1G113350.5	Barley	plastid	17.72	7.31
HORVU2Hr1G108260.3	Barley	cytosol	8.23	3.1

Protein Annotations

EnsemblPlants:HORVU6Hr1G047380.1	EnsemblPlantsGene:HORVU6Hr1G047380	Gene3D:3.40.50.720	InterPro:NAD(P)-bd_dom_sf	PANTHER:PTHR10366	PANTHER:PTHR10366:SF276
SEG:seg	SUPFAM:SSF51735	UniParc:UPI000B4744EC	UniProt:A0A287U3J9	MapMan:35.1	:

Description

No Description!

Coordinates

chrchr6H:-:281427034..281428212

Molecular Weight (calculated)

17919.8 Da

IEP (calculated)

10.734

GRAVY (calculated)

-0.254

Length

158 amino acids

Sequence
(BLAST)

001: MDVLRVQLAG REGHLGVRQR ERPGFISIIP TLVVGPFLSA GMPPSLVTAL AFIMGNEAHY SILKQVQLVH LDNLCNAMTF LFEHPEANGP YISSSHDATI
101: HVLARMLGDR FPEYDIPKKF AGVDDNFQPI NFSKKPERRA RGWGWRGGGW RRRWRARL

Best Arabidopsis Sequence Match ( AT5G42800.1 )
(BLAST)

001: MVSQKETVCV TGASGFIGSW LVMRLLERGY FVRATVRDPG NLKKVQHLLD LPNAKTLLTL WKADLSEEGS YDDAINGCDG VFHVATPMDF ESKDPENEVI
101: KPTVNGMLGI MKACVKAKTV RRFVFTSSAG TVNVEEHQKN VYDENDWSDL EFIMSKKMTG WMYFVSKTLA EKAAWDFAEE KGLDFISIIP TLVVGPFITT
201: SMPPSLITAL SPITRNEAHY SIIRQGQYVH LDDLCNAHIF LYEQAAAKGR YICSSHDATI LTISKFLRPK YPEYNVPSTF EGVDENLKSI EFSSKKLTDM
301: GFNFKYSLEE MFIESIETCR QKGFLPVSLS YQSISEIKTK NENIDVKTGD GLTDGMKPCN KTETGITGER TDAPMLAQQM CA

Arabidopsis Description

DFRADihydroflavonol reductase [Source:UniProtKB/TrEMBL;Acc:B1GV15]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.