Factsheet for HORVU5Hr1G112670.1

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 1
cytosol 3
plastid 1
mitochondrion 1
peroxisome 1

Predictors

GFP

MS/MS

Papers

PPI

Inferred distinct locusB in Crop

locusB	locations
HORVU1Hr1G004830.1
HORVU1Hr1G089540.1
HORVU2Hr1G004170.4
HORVU2Hr1G005220.3
HORVU2Hr1G110130.3
HORVU2Hr1G116390.2
HORVU3Hr1G056560.2
HORVU6Hr1G047380.1
HORVU6Hr1G048650.1

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT3G55120.1	HORVU2Hr1G110130.3	AT3G51240.1	10536025
AT3G55120.1	HORVU1Hr1G004830.1	AT5G13930.1	10536025
AT3G55120.1	HORVU1Hr1G089540.1	AT5G13930.1	10536025
AT3G55120.1	HORVU2Hr1G004170.4	AT5G13930.1	10536025
AT3G55120.1	HORVU2Hr1G005220.3	AT5G13930.1	10536025
AT3G55120.1	HORVU2Hr1G116390.2	AT5G13930.1	10536025
AT3G55120.1	HORVU3Hr1G056560.2	AT5G42800.1	10536025
AT3G55120.1	HORVU6Hr1G047380.1	AT5G42800.1	10536025
AT3G55120.1	HORVU6Hr1G048650.1	AT5G42800.1	10536025

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS5D01G489000.1	Wheat	cytosol	95.67	95.67
TraesCS5A01G475600.1	Wheat	golgi, plastid	93.07	93.89
TraesCS5B01G488900.1	Wheat	golgi	91.34	91.34
Os03t0819600-01	Rice	cytosol, plasma membrane	79.22	78.54
EER90629	Sorghum	cytosol	77.92	77.92
Zm00001d034635_P001	Maize	cytosol, extracellular	75.76	75.76
Zm00001d012972_P001	Maize	cytosol	75.32	75.32
Solyc05g010320.2.1	Tomato	cytosol	57.14	58.41
VIT_13s0067g03820.t01	Wine grape	extracellular	58.87	58.12
GSMUA_Achr4P16830_001	Banana	cytosol	57.14	55.93
Solyc05g010310.2.1	Tomato	cytosol	50.65	52.7
KRG92978	Soybean	plastid	49.78	50.44
AT3G55120.1	Thale cress	plastid	52.81	49.59
CDY40202	Canola	plastid	53.25	48.81
CDX73402	Canola	plastid	52.81	48.61
Bra007142.1-P	Field mustard	plastid	52.81	48.61
CDY53696	Canola	plastid	41.56	48.24
AT5G66220.1	Thale cress	cytosol	35.06	46.55
CDY65002	Canola	plastid	45.02	45.81
Bra003209.1-P	Field mustard	plastid	44.59	45.37
Bra017728.1-P	Field mustard	plastid	38.53	45.18
CDX72554	Canola	plastid	45.45	44.87
CDY47033	Canola	plastid	36.8	44.27
Bra039362.1-P	Field mustard	cytosol	15.58	39.56
CDY71367	Canola	cytosol	15.58	37.89
CDX73401	Canola	plastid	45.89	34.87
CDY40203	Canola	plastid	40.69	34.18
Bra007145.1-P	Field mustard	plastid	44.16	34.11
HORVU5Hr1G046480.1	Barley	cytosol, golgi, mitochondrion, plastid	28.57	25.19

Protein Annotations

KEGG:00941+5.5.1.6	Gene3D:1.10.890.20	Gene3D:3.50.70.10	MapMan:9.2.2.2.1	EMBL:AK374952	InterPro:Chalcone_isomerase
InterPro:Chalcone_isomerase_3-sand	InterPro:Chalcone_isomerase_bundle_sf	InterPro:Chalcone_isomerase_sf	UniProt:F2EFM6	GO:GO:0003674	GO:GO:0003824
GO:GO:0008150	GO:GO:0008152	GO:GO:0009058	GO:GO:0009813	GO:GO:0016872	GO:GO:0045430
EnsemblPlantsGene:HORVU5Hr1G112670	EnsemblPlants:HORVU5Hr1G112670.1	InterPro:IPR016088	InterPro:IPR016089	PFAM:PF02431	PANTHER:PTHR28039
PANTHER:PTHR28039:SF8	SUPFAM:SSF54626	UniParc:UPI00000A0D50	SEG:seg	:	:

Description

Chalcone-flavonone isomerase family protein [Source:UniProtKB/TrEMBL;Acc:F2EFM6]

Coordinates

chrchr5H:+:639991480..639992863

Molecular Weight (calculated)

23705.2 Da

IEP (calculated)

5.273

GRAVY (calculated)

0.300

Length

231 amino acids

Sequence
(BLAST)

001: MAVSELEVDG VVFPPLARPP GSAHAHFLAG AGVRGMEIGG HFIKFTAIGV YLQADAAVSA LAAKWAGKPA ADLASDAAFF RDVVTGEFEK FTRVTMILPL
101: TGAQYSDKVT ENCVAYWKAA GVYTDAEAAA VDKFKEAFGP HSFAPGASIL FTHSPAGVLT VAFSKDSSVP ESGGVAIENA RLCEAVLESI IGEHGVSPAA
201: KLSLANRVAE LLKGAAHAGG EPAAEPVPVS V

Best Arabidopsis Sequence Match ( AT3G55120.1 )
(BLAST)

001: MSSSNACASP SPFPAVTKLH VDSVTFVPSV KSPASSNPLF LGGAGVRGLD IQGKFVIFTV IGVYLEGNAV PSLSVKWKGK TTEELTESIP FFREIVTGAF
101: EKFIKVTMKL PLTGQQYSEK VTENCVAIWK QLGLYTDCEA KAVEKFLEIF KEETFPPGSS ILFALSPTGS LTVAFSKDDS IPETGIAVIE NKLLAEAVLE
201: SIIGKNGVSP GTRLSVAERL SQLMMKNKDE KEVSDHSVEE KLAKEN

Arabidopsis Description

CHI1Chalcone--flavonone isomerase 1 [Source:UniProtKB/Swiss-Prot;Acc:P41088]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.