Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- plastid 1
- mitochondrion 2
- cytosol 2
- nucleus 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| AT3G55120.1 | Thale cress | plastid | 60.92 | 43.09 |
| KRG92978 | Soybean | plastid | 55.75 | 42.54 |
| Solyc05g010310.2.1 | Tomato | cytosol | 49.43 | 38.74 |
| Solyc05g010320.2.1 | Tomato | cytosol | 49.43 | 38.05 |
| VIT_13s0067g03820.t01 | Wine grape | extracellular | 50.57 | 37.61 |
| Zm00001d012972_P001 | Maize | cytosol | 48.28 | 36.36 |
| Zm00001d034635_P001 | Maize | cytosol, extracellular | 47.7 | 35.93 |
| TraesCS5A01G475600.1 | Wheat | golgi, plastid | 47.13 | 35.81 |
| TraesCS5B01G488900.1 | Wheat | golgi | 47.13 | 35.5 |
| Os03t0819600-01 | Rice | cytosol, plasma membrane | 47.13 | 35.19 |
| EER90629 | Sorghum | cytosol | 46.55 | 35.06 |
| HORVU5Hr1G112670.1 | Barley | cytosol | 46.55 | 35.06 |
| TraesCS5D01G489000.1 | Wheat | cytosol | 46.55 | 35.06 |
| GSMUA_Achr4P16830_001 | Banana | cytosol | 44.25 | 32.63 |
| TraesCS7B01G038200.1 | Wheat | cytosol | 39.08 | 30.36 |
| AT5G05270.1 | Thale cress | cytosol | 23.56 | 19.62 |
Protein Annotations
| KEGG:00941+5.5.1.6 | Gene3D:1.10.890.20 | Gene3D:3.50.70.10 | MapMan:9.2.2.2.1 | ProteinID:AED98184.1 | ArrayExpress:AT5G66220 |
| EnsemblPlantsGene:AT5G66220 | RefSeq:AT5G66220 | TAIR:AT5G66220 | RefSeq:AT5G66220-TAIR-G | EnsemblPlants:AT5G66220.1 | TAIR:AT5G66220.1 |
| InterPro:Chalcone_isomerase | InterPro:Chalcone_isomerase_3-sand | InterPro:Chalcone_isomerase_bundle_sf | InterPro:Chalcone_isomerase_sf | EMBL:DQ447111 | GO:GO:0003674 |
| GO:GO:0003824 | GO:GO:0016872 | InterPro:IPR016088 | InterPro:IPR016089 | RefSeq:NP_201423.2 | PFAM:PF02431 |
| PANTHER:PTHR28039 | PANTHER:PTHR28039:SF8 | SUPFAM:SSF54626 | UniParc:UPI0000D5BD3B | : | : |
Description
Chalcone-flavanone isomerase family protein [Source:TAIR;Acc:AT5G66220]
Coordinates
chr5:+:26461177..26462174
Molecular Weight (calculated)
19305.7 Da
IEP (calculated)
10.486
GRAVY (calculated)
-0.377
Length
174 amino acids
Sequence
(BLAST)
(BLAST)
001: MALPSISAKW KGKNAKELTE SVPFFRQLVT GEFEKLARVT MKKRLTGIQY SEKVVENCEE IMKASGKYTR SEAKAIDQFL MVFKNQDFPP GSSIIFAICP
101: KGSLTIAFSK EERVPKTGKA VIKNKLLGEA VLESMIGKNG VSPATRKSLA ERLSKLMNKK DPYNEANVNV ATKN
101: KGSLTIAFSK EERVPKTGKA VIKNKLLGEA VLESMIGKNG VSPATRKSLA ERLSKLMNKK DPYNEANVNV ATKN
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.